RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W HRR25P29295 494 aaKnown RBP5.54□□□□□ -1.52
VPS36YLR417W RAD16P31244 790 aa5.54□□□□□ -1.52
VPS36YLR417W STB5P38699 743 aa5.54□□□□□ -1.52
VPS36YLR417W AXL2P38928 823 aa5.54□□□□□ -1.52
VPS36YLR417W YER010CP40011 234 aa5.54□□□□□ -1.52
VPS36YLR417W PHO23P50947 330 aa5.54□□□□□ -1.52
VPS36YLR417W RRT6P53117 311 aaPredicted RBP5.54□□□□□ -1.52
VPS36YLR417W ICL2Q12031 575 aa5.54□□□□□ -1.52
VPS36YLR417W MLH3Q12083 715 aa5.54□□□□□ -1.52
VPS36YLR417W PPR1P07272 904 aaPredicted RBP5.54□□□□□ -1.52
VPS36YLR417W VPS34P22543 875 aa5.54□□□□□ -1.52
VPS36YLR417W CAP1P28495 268 aaKnown RBP5.54□□□□□ -1.52
VPS36YLR417W DEF1P35732 738 aaKnown RBP5.54□□□□□ -1.52
VPS36YLR417W SET3P36124 751 aa5.54□□□□□ -1.52
VPS36YLR417W IDS2P46958 469 aa5.54□□□□□ -1.52
VPS36YLR417W NTO1Q12311 748 aa5.54□□□□□ -1.52
VPS36YLR417W THR1P17423 357 aaKnown RBP5.53□□□□□ -1.52
VPS36YLR417W FUB1P25659 250 aa5.53□□□□□ -1.52
VPS36YLR417W MDM1Q01846 1127 aa5.53□□□□□ -1.52
VPS36YLR417W YPL108WQ02872 168 aaPredicted RBP5.53□□□□□ -1.52
VPS36YLR417W EFR3Q03653 782 aaKnown RBP5.53□□□□□ -1.52
VPS36YLR417W YSH1Q06224 779 aaPredicted RBP5.53□□□□□ -1.52
VPS36YLR417W YDL086WQ07505 273 aa5.53□□□□□ -1.52
VPS36YLR417W GUK1P15454 187 aaKnown RBP5.52□□□□□ -1.53
VPS36YLR417W PRE2P30656 287 aaKnown RBP5.52□□□□□ -1.53
VPS36YLR417W CBF2P32504 956 aa5.52□□□□□ -1.53
VPS36YLR417W MFT1P33441 392 aaKnown RBP5.52□□□□□ -1.53
VPS36YLR417W TEF4P36008 412 aaKnown RBP5.52□□□□□ -1.53
VPS36YLR417W MRPL7P36519 292 aa5.52□□□□□ -1.53
VPS36YLR417W AVT1P47082 602 aa5.52□□□□□ -1.53
VPS36YLR417W RIA1P53893 1110 aa5.52□□□□□ -1.53
VPS36YLR417W CBK1P53894 756 aa5.52□□□□□ -1.53
VPS36YLR417W YLR040CQ07988 224 aa5.52□□□□□ -1.53
VPS36YLR417W MED1Q12321 566 aa5.52□□□□□ -1.53
VPS36YLR417W SWC3P31376 625 aa5.51□□□□□ -1.53
VPS36YLR417W HOF1Q05080 669 aa5.51□□□□□ -1.53
VPS36YLR417W SUL2Q12325 893 aa5.51□□□□□ -1.53
VPS36YLR417W FUM1P08417 488 aaKnown RBP5.51□□□□□ -1.53
VPS36YLR417W PET122P10355 254 aa5.51□□□□□ -1.53
VPS36YLR417W SUL1P38359 859 aa5.51□□□□□ -1.53
VPS36YLR417W NOP16P40007 231 aaKnown RBP5.51□□□□□ -1.53
VPS36YLR417W DPH1P40487 425 aaKnown RBP5.51□□□□□ -1.53
VPS36YLR417W PSP1P50896 841 aaKnown RBP5.51□□□□□ -1.53
VPS36YLR417W YGR151CP53287 111 aa5.51□□□□□ -1.53
VPS36YLR417W TSR2Q06672 205 aaKnown RBP5.51□□□□□ -1.53
VPS36YLR417W USV1Q12132 391 aa5.51□□□□□ -1.53
VPS36YLR417W TPK1P06244 397 aa5.5□□□□□ -1.53
VPS36YLR417W CTS1P29029 562 aa5.5□□□□□ -1.53
VPS36YLR417W CNS1P33313 385 aa5.5□□□□□ -1.53
VPS36YLR417W ELF1P36053 145 aa5.5□□□□□ -1.53
VPS36YLR417W MUD2P36084 527 aaKnown RBP5.5□□□□□ -1.53
VPS36YLR417W YHR097CP38809 366 aaKnown RBP5.5□□□□□ -1.53
VPS36YLR417W ARB1P40024 610 aaKnown RBP5.5□□□□□ -1.53
VPS36YLR417W ESF2P53743 316 aaKnown RBP5.5□□□□□ -1.53
VPS36YLR417W ATG4P53867 494 aa5.5□□□□□ -1.53
VPS36YLR417W URN1Q06525 465 aaKnown RBP5.5□□□□□ -1.53
VPS36YLR417W COX17Q12287 69 aa5.5□□□□□ -1.53
VPS36YLR417W ENT1Q12518 454 aa5.5□□□□□ -1.53
VPS36YLR417W INH1P01097 85 aa5.49□□□□□ -1.53
VPS36YLR417W APL3P38065 1025 aa5.49□□□□□ -1.53
VPS36YLR417W THI6P41835 540 aa5.49□□□□□ -1.53
VPS36YLR417W SSL2Q00578 843 aa5.49□□□□□ -1.53
VPS36YLR417W USA1Q03714 838 aa5.49□□□□□ -1.53
VPS36YLR417W YCR061WP25639 631 aa5.48□□□□□ -1.53
VPS36YLR417W PMI40P29952 429 aaKnown RBP5.48□□□□□ -1.53
VPS36YLR417W GCD7P32502 381 aaPredicted RBP5.48□□□□□ -1.53
VPS36YLR417W PAH1P32567 862 aa5.48□□□□□ -1.53
VPS36YLR417W JNM1P36224 373 aa5.48□□□□□ -1.53
VPS36YLR417W PPS1P38148 807 aa5.48□□□□□ -1.53
VPS36YLR417W RIC1P40395 1056 aa5.48□□□□□ -1.53
VPS36YLR417W DIP5P53388 608 aa5.48□□□□□ -1.53
VPS36YLR417W CSL4P53859 292 aaPredicted RBP5.48□□□□□ -1.53
VPS36YLR417W UFO1Q04511 668 aa5.48□□□□□ -1.53
VPS36YLR417W SNO4Q04902 237 aa5.48□□□□□ -1.53
VPS36YLR417W VAM6Q07468 1049 aa5.48□□□□□ -1.53
VPS36YLR417W YOL073CQ08232 322 aa5.48□□□□□ -1.53
VPS36YLR417W HSP33Q08914 237 aaKnown RBP5.48□□□□□ -1.53
VPS36YLR417W HSP32Q08992 237 aa5.48□□□□□ -1.53
VPS36YLR417W SAN1P22470 610 aa5.48□□□□□ -1.53
VPS36YLR417W NUP120P35729 1037 aa5.48□□□□□ -1.53
VPS36YLR417W NDE1P40215 560 aa5.48□□□□□ -1.53
VPS36YLR417W SNF12P53628 566 aa5.48□□□□□ -1.53
VPS36YLR417W DAK1P54838 584 aaKnown RBP5.48□□□□□ -1.53
VPS36YLR417W IMH1Q06704 911 aaKnown RBP5.48□□□□□ -1.53
VPS36YLR417W RKI1Q12189 258 aa5.48□□□□□ -1.53
VPS36YLR417W PCD1Q12524 340 aa5.48□□□□□ -1.53
VPS36YLR417W MPE1P35728 441 aaKnown RBP5.47□□□□□ -1.53
VPS36YLR417W SDH8P38345 138 aa5.47□□□□□ -1.53
VPS36YLR417W VPS8P39702 1274 aa5.47□□□□□ -1.53
VPS36YLR417W YEL068CP39977 110 aa5.47□□□□□ -1.53
VPS36YLR417W IST3P40565 148 aaPredicted RBP5.47□□□□□ -1.53
VPS36YLR417W SKP2P42843 763 aa5.47□□□□□ -1.53
VPS36YLR417W ZAP1P47043 880 aa5.47□□□□□ -1.53
VPS36YLR417W SRB7P47822 140 aa5.47□□□□□ -1.53
VPS36YLR417W UPF3P48412 387 aaKnown RBP5.47□□□□□ -1.53
VPS36YLR417W MFM1Q02783 413 aa5.47□□□□□ -1.53
VPS36YLR417W BMS1Q08965 1183 aaKnown RBP5.47□□□□□ -1.53
VPS36YLR417W SEM1O94742 89 aa5.46□□□□□ -1.54
VPS36YLR417W CDC31P06704 161 aaKnown RBP5.46□□□□□ -1.54
VPS36YLR417W CDC16P09798 840 aa5.46□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 117 ms