RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C RIM20Q12033 661 aa2.38□□□□□ -2.03
CSF1YLR087C RIP1P08067 215 aa2.38□□□□□ -2.03
CSF1YLR087C RET1P22276 1149 aaKnown RBP2.38□□□□□ -2.03
CSF1YLR087C YEL025CP39991 1188 aa2.38□□□□□ -2.03
CSF1YLR087C YEN1P40028 759 aa2.38□□□□□ -2.03
CSF1YLR087C RET2P43621 546 aa2.38□□□□□ -2.03
CSF1YLR087C ART5P53244 586 aaKnown RBP2.38□□□□□ -2.03
CSF1YLR087C TEP1P53916 434 aa2.38□□□□□ -2.03
CSF1YLR087C YMR209CQ03648 457 aa2.38□□□□□ -2.03
CSF1YLR087C BUL2Q03758 920 aaKnown RBP2.38□□□□□ -2.03
CSF1YLR087C SHE9Q04172 456 aa2.38□□□□□ -2.03
CSF1YLR087C VPS20Q04272 221 aa2.38□□□□□ -2.03
CSF1YLR087C TSR3Q12094 313 aaKnown RBP2.38□□□□□ -2.03
CSF1YLR087C SKS1Q12505 502 aa2.38□□□□□ -2.03
CSF1YLR087C YKT6P36015 200 aaKnown RBP2.38□□□□□ -2.03
CSF1YLR087C ANR2P36090 516 aaPredicted RBP2.38□□□□□ -2.03
CSF1YLR087C CCZ1P38273 704 aa2.38□□□□□ -2.03
CSF1YLR087C MIP6P38760 659 aaKnown RBP2.38□□□□□ -2.03
CSF1YLR087C WSS1P38838 269 aa2.38□□□□□ -2.03
CSF1YLR087C RGI1P40043 161 aaPredicted RBP2.38□□□□□ -2.03
CSF1YLR087C ATG3P40344 310 aa2.38□□□□□ -2.03
CSF1YLR087C FAA4P47912 694 aaKnown RBP2.38□□□□□ -2.03
CSF1YLR087C UPF3P48412 387 aaKnown RBP2.38□□□□□ -2.03
CSF1YLR087C MRPS17Q03246 237 aaPredicted RBP2.38□□□□□ -2.03
CSF1YLR087C RSM28Q03430 361 aa2.38□□□□□ -2.03
CSF1YLR087C CAB1Q04430 367 aa2.38□□□□□ -2.03
CSF1YLR087C ATG40Q99325 256 aa2.38□□□□□ -2.03
CSF1YLR087C CIT1P00890 479 aa2.38□□□□□ -2.03
CSF1YLR087C TRP5P00931 707 aaKnown RBP2.38□□□□□ -2.03
CSF1YLR087C RAD6P06104 172 aa2.38□□□□□ -2.03
CSF1YLR087C MAK16P10962 306 aaPredicted RBP2.38□□□□□ -2.03
CSF1YLR087C PEP5P12868 1029 aa2.38□□□□□ -2.03
CSF1YLR087C YKL023WP36103 277 aaKnown RBP2.38□□□□□ -2.03
CSF1YLR087C PRY2P36110 329 aa2.38□□□□□ -2.03
CSF1YLR087C SPF1P39986 1215 aaKnown RBP2.38□□□□□ -2.03
CSF1YLR087C ROM1P53046 1155 aa2.38□□□□□ -2.03
CSF1YLR087C YDR131CQ03899 556 aa2.38□□□□□ -2.03
CSF1YLR087C YPL272CQ08984 517 aa2.38□□□□□ -2.03
CSF1YLR087C FYV7Q12247 151 aa2.38□□□□□ -2.03
CSF1YLR087C CEX1Q12453 761 aa2.38□□□□□ -2.03
CSF1YLR087C RPT5P33297 434 aaKnown RBP2.37□□□□□ -2.03
CSF1YLR087C AFG3P39925 761 aa2.37□□□□□ -2.03
CSF1YLR087C BRO1P48582 844 aa2.37□□□□□ -2.03
CSF1YLR087C MPP6P53725 186 aaPredicted RBP2.37□□□□□ -2.03
CSF1YLR087C YIL177CP40434 1758 aa2.37□□□□□ -2.03
CSF1YLR087C YJL225CP40889 1758 aa2.37□□□□□ -2.03
CSF1YLR087C GPH1P06738 902 aaKnown RBP2.37□□□□□ -2.03
CSF1YLR087C DCD1P06773 312 aa2.37□□□□□ -2.03
CSF1YLR087C DBP5P20449 482 aaKnown RBP2.37□□□□□ -2.03
CSF1YLR087C RPS1AP33442 255 aaKnown RBP2.37□□□□□ -2.03
CSF1YLR087C TIP20P33891 701 aa2.37□□□□□ -2.03
CSF1YLR087C GIP4P39732 760 aa2.37□□□□□ -2.03
CSF1YLR087C SAH1P39954 449 aaKnown RBP2.37□□□□□ -2.03
CSF1YLR087C NOP16P40007 231 aaKnown RBP2.37□□□□□ -2.03
CSF1YLR087C VID27P40157 782 aa2.37□□□□□ -2.03
CSF1YLR087C CST6P40535 587 aa2.37□□□□□ -2.03
CSF1YLR087C COS5P47187 383 aa2.37□□□□□ -2.03
CSF1YLR087C RFX1P48743 811 aa2.37□□□□□ -2.03
CSF1YLR087C NUP42P49686 430 aaKnown RBP2.37□□□□□ -2.03
CSF1YLR087C ARP4P80428 489 aa2.37□□□□□ -2.03
CSF1YLR087C TMA20P89886 181 aaPredicted RBP2.37□□□□□ -2.03
CSF1YLR087C TAF11Q04226 346 aa2.37□□□□□ -2.03
CSF1YLR087C PHM6Q05637 104 aa2.37□□□□□ -2.03
CSF1YLR087C COS7Q07788 383 aa2.37□□□□□ -2.03
CSF1YLR087C BUD23P25627 275 aaPredicted RBP2.37□□□□□ -2.03
CSF1YLR087C RAD54P32863 898 aa2.37□□□□□ -2.03
CSF1YLR087C MPS2P53159 387 aa2.37□□□□□ -2.03
CSF1YLR087C HXT11P54862 567 aa2.37□□□□□ -2.03
CSF1YLR087C PNP1Q05788 311 aa2.37□□□□□ -2.03
CSF1YLR087C ARP6Q12509 438 aa2.37□□□□□ -2.03
CSF1YLR087C SSM4P40318 1319 aa2.37□□□□□ -2.03
CSF1YLR087C MRPL25P23369 157 aa2.37□□□□□ -2.03
CSF1YLR087C RSC6P25632 483 aa2.37□□□□□ -2.03
CSF1YLR087C SPP381P38282 291 aaPredicted RBP2.37□□□□□ -2.03
CSF1YLR087C YIL012WP40551 113 aa2.37□□□□□ -2.03
CSF1YLR087C HXT9P40885 567 aa2.37□□□□□ -2.03
CSF1YLR087C RSM26P47141 266 aa2.37□□□□□ -2.03
CSF1YLR087C RBL2P48606 106 aaKnown RBP2.37□□□□□ -2.03
CSF1YLR087C YGR066CP53242 292 aa2.37□□□□□ -2.03
CSF1YLR087C SNF12P53628 566 aa2.37□□□□□ -2.03
CSF1YLR087C YNR068CP53754 272 aa2.37□□□□□ -2.03
CSF1YLR087C SND1Q04007 877 aa2.37□□□□□ -2.03
CSF1YLR087C BRE4Q07660 1125 aa2.37□□□□□ -2.03
CSF1YLR087C YHR213W-AQ8TGT4 77 aa2.37□□□□□ -2.03
CSF1YLR087C BNI1P41832 1953 aa2.37□□□□□ -2.03
CSF1YLR087C CYB2P00175 591 aa2.37□□□□□ -2.03
CSF1YLR087C MET2P08465 486 aa2.37□□□□□ -2.03
CSF1YLR087C SSC1P0CS90 654 aaKnown RBP2.37□□□□□ -2.03
CSF1YLR087C APM2P38700 605 aa2.37□□□□□ -2.03
CSF1YLR087C PRE6P40303 254 aaKnown RBP2.37□□□□□ -2.03
CSF1YLR087C ATP25Q03153 612 aa2.37□□□□□ -2.03
CSF1YLR087C HAS1Q03532 505 aaKnown RBP2.37□□□□□ -2.03
CSF1YLR087C COQ11Q05892 277 aa2.37□□□□□ -2.03
CSF1YLR087C SIF2P38262 535 aa2.37□□□□□ -2.03
CSF1YLR087C RCF2P53721 224 aa2.37□□□□□ -2.03
CSF1YLR087C CEG1Q01159 459 aaPredicted RBP2.37□□□□□ -2.03
CSF1YLR087C SPC2Q04969 178 aa2.37□□□□□ -2.03
CSF1YLR087C LOT6Q07923 191 aa2.37□□□□□ -2.03
CSF1YLR087C YOS9Q99220 542 aa2.37□□□□□ -2.03
CSF1YLR087C ARG80P07249 177 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms