RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C NST1P53935 1240 aa2.87□□□□□ -1.95
CSF1YLR087C SWR1Q05471 1514 aa2.87□□□□□ -1.95
CSF1YLR087C MDS3P53094 1487 aa2.87□□□□□ -1.95
CSF1YLR087C SIN3P22579 1536 aa2.86□□□□□ -1.95
CSF1YLR087C GEA1P47102 1408 aaPredicted RBP2.86□□□□□ -1.95
CSF1YLR087C PRP3Q03338 469 aaPredicted RBP2.86□□□□□ -1.95
CSF1YLR087C TRM3Q07527 1436 aa2.86□□□□□ -1.95
CSF1YLR087C SSN2P38931 1420 aa2.86□□□□□ -1.95
CSF1YLR087C PAP2P53632 584 aaKnown RBP2.86□□□□□ -1.95
CSF1YLR087C YOR1P53049 1477 aa2.86□□□□□ -1.95
CSF1YLR087C NSR1P27476 414 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
CSF1YLR087C SMC2P38989 1170 aaKnown RBP2.86□□□□□ -1.95
CSF1YLR087C DSL1P53847 754 aa2.85□□□□□ -1.95
CSF1YLR087C PTH2P34222 208 aa2.85□□□□□ -1.95
CSF1YLR087C MYO4P32492 1471 aa2.85□□□□□ -1.95
CSF1YLR087C DOT5P40553 215 aa2.85□□□□□ -1.95
CSF1YLR087C YMR124WP39523 943 aaKnown RBP2.85□□□□□ -1.95
CSF1YLR087C PUS1Q12211 544 aaKnown RBP2.85□□□□□ -1.95
CSF1YLR087C TOP2P06786 1428 aaKnown RBP2.85□□□□□ -1.95
CSF1YLR087C SBA1P28707 216 aaKnown RBP2.85□□□□□ -1.95
CSF1YLR087C ABP1P15891 592 aaKnown RBP2.84□□□□□ -1.95
CSF1YLR087C RPS0AP32905 252 aaKnown RBP2.84□□□□□ -1.95
CSF1YLR087C COG8Q04632 607 aa2.84□□□□□ -1.95
CSF1YLR087C ENT1Q12518 454 aa2.84□□□□□ -1.95
CSF1YLR087C STH1P32597 1359 aa2.84□□□□□ -1.95
CSF1YLR087C NAP1P25293 417 aaKnown RBP2.84□□□□□ -1.95
CSF1YLR087C UFD4P33202 1483 aa2.84□□□□□ -1.96
CSF1YLR087C YMR111CQ04461 462 aaPredicted RBP2.83□□□□□ -1.96
CSF1YLR087C THR4P16120 514 aaKnown RBP2.83□□□□□ -1.96
CSF1YLR087C TAF5P38129 798 aa2.83□□□□□ -1.96
CSF1YLR087C BRL1P38770 471 aa2.83□□□□□ -1.96
CSF1YLR087C ARL1P38116 183 aaKnown RBP2.83□□□□□ -1.96
CSF1YLR087C TCB1Q12466 1186 aa2.83□□□□□ -1.96
CSF1YLR087C PSK1P31374 1356 aa2.82□□□□□ -1.96
CSF1YLR087C SUI2P20459 304 aaKnown RBP2.82□□□□□ -1.96
CSF1YLR087C CDC11P32458 415 aa2.82□□□□□ -1.96
CSF1YLR087C YNL050CP53952 270 aa2.82□□□□□ -1.96
CSF1YLR087C SLD2P34252 453 aa2.82□□□□□ -1.96
CSF1YLR087C IES1P43579 692 aa2.81□□□□□ -1.96
CSF1YLR087C YVC1Q12324 675 aa2.81□□□□□ -1.96
CSF1YLR087C YTA7P40340 1379 aa2.81□□□□□ -1.96
CSF1YLR087C SEC26P41810 973 aaKnown RBP2.81□□□□□ -1.96
CSF1YLR087C ESF2P53743 316 aaKnown RBP2.81□□□□□ -1.96
CSF1YLR087C IQG1Q12280 1495 aa2.81□□□□□ -1.96
CSF1YLR087C RAD50P12753 1312 aa2.8□□□□□ -1.96
CSF1YLR087C RTF1P53064 558 aa2.8□□□□□ -1.96
CSF1YLR087C BUD4P47136 1447 aa2.8□□□□□ -1.96
CSF1YLR087C GEA2P39993 1459 aaKnown RBP2.8□□□□□ -1.96
CSF1YLR087C SSO1P32867 290 aa2.8□□□□□ -1.96
CSF1YLR087C LAM1P38851 1228 aa2.8□□□□□ -1.96
CSF1YLR087C MFT1P33441 392 aaKnown RBP2.8□□□□□ -1.96
CSF1YLR087C MMS22Q06164 1454 aa2.8□□□□□ -1.96
CSF1YLR087C TFC3P34111 1160 aa2.8□□□□□ -1.96
CSF1YLR087C KRI1P42846 591 aaKnown RBP2.8□□□□□ -1.96
CSF1YLR087C HAP1P0CE41 1502 aa2.8□□□□□ -1.96
CSF1YLR087C RNH1Q04740 348 aa2.8□□□□□ -1.96
CSF1YLR087C CBF5P33322 483 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
CSF1YLR087C REI1P38344 393 aaPredicted RBP2.79□□□□□ -1.96
CSF1YLR087C CAT8P39113 1433 aa2.79□□□□□ -1.96
CSF1YLR087C ENT3P47160 408 aa2.79□□□□□ -1.96
CSF1YLR087C PIL1P53252 339 aaKnown RBP2.79□□□□□ -1.96
CSF1YLR087C SRP54P20424 541 aaKnown RBP2.79□□□□□ -1.96
CSF1YLR087C EPL1P43572 832 aa2.79□□□□□ -1.96
CSF1YLR087C PRT1P06103 763 aaKnown RBP2.79□□□□□ -1.96
CSF1YLR087C SAC3P46674 1301 aa2.79□□□□□ -1.96
CSF1YLR087C DEP1P31385 405 aa2.78□□□□□ -1.96
CSF1YLR087C JNM1P36224 373 aa2.78□□□□□ -1.96
CSF1YLR087C VMS1Q04311 632 aaKnown RBP2.78□□□□□ -1.96
CSF1YLR087C BOI2P39969 1040 aa2.78□□□□□ -1.96
CSF1YLR087C TAN1P53072 289 aaPredicted RBP2.78□□□□□ -1.96
CSF1YLR087C SET2P46995 733 aaKnown RBP2.78□□□□□ -1.96
CSF1YLR087C RPP0P05317 312 aaKnown RBP2.78□□□□□ -1.96
CSF1YLR087C SWD1P39706 426 aa2.78□□□□□ -1.96
CSF1YLR087C NNF2P53253 936 aa2.78□□□□□ -1.96
CSF1YLR087C EDE1P34216 1381 aa2.78□□□□□ -1.96
CSF1YLR087C PPX1P38698 397 aa2.78□□□□□ -1.97
CSF1YLR087C YPK9Q12697 1472 aa2.77□□□□□ -1.97
CSF1YLR087C MON2P48563 1636 aaPredicted RBP2.77□□□□□ -1.97
CSF1YLR087C NUP84P52891 726 aa2.77□□□□□ -1.97
CSF1YLR087C MON1P53129 644 aa2.77□□□□□ -1.97
CSF1YLR087C POB3Q04636 552 aaKnown RBP2.77□□□□□ -1.97
CSF1YLR087C TRM732Q03496 1420 aa2.77□□□□□ -1.97
CSF1YLR087C TY3B-IQ7LHG5 1498 aaKnown RBP2.77□□□□□ -1.97
CSF1YLR087C SLK19Q08581 821 aaKnown RBP2.77□□□□□ -1.97
CSF1YLR087C THO2P53552 1597 aaKnown RBP2.77□□□□□ -1.97
CSF1YLR087C ARD1P07347 238 aaPredicted RBP2.77□□□□□ -1.97
CSF1YLR087C BYE1P36106 594 aa2.77□□□□□ -1.97
CSF1YLR087C RPC82P32349 654 aa2.76□□□□□ -1.97
CSF1YLR087C VPS27P40343 622 aaKnown RBP2.76□□□□□ -1.97
CSF1YLR087C NMD2P38798 1089 aaKnown RBP2.76□□□□□ -1.97
CSF1YLR087C SFI1Q12369 946 aa2.76□□□□□ -1.97
CSF1YLR087C SWI1P09547 1314 aa2.76□□□□□ -1.97
CSF1YLR087C MSH3P25336 1018 aa2.76□□□□□ -1.97
CSF1YLR087C VPS41P38959 992 aa2.76□□□□□ -1.97
CSF1YLR087C YLR419WQ06698 1435 aaKnown RBP2.76□□□□□ -1.97
CSF1YLR087C MNR2P35724 969 aa2.76□□□□□ -1.97
CSF1YLR087C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97not detected
CSF1YLR087C ZDS1P50111 915 aaKnown RBP2.76□□□□□ -1.97
CSF1YLR087C CDC60P26637 1090 aaKnown RBP2.76□□□□□ -1.97
CSF1YLR087C DEF1P35732 738 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms