RNA–Protein interactions for RNA: ENST00000616888.1

Metazoa_SRP.60-201, humanhuman

BASIC

Gene Metazoa_SRP, Length 305 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Metazoa_SRP.60-201ENST00000616888 MKRN4PQ13434 485 aaPredicted RBP15.35■□□□□ 0.05
Metazoa_SRP.60-201ENST00000616888 ABCC8Q09428 1581 aa15.31■□□□□ 0.04
Metazoa_SRP.60-201ENST00000616888 PRKAR2AP13861 404 aaKnown RBP15.3■□□□□ 0.04
Metazoa_SRP.60-201ENST00000616888 SSUH2Q9Y2M2 353 aa15.29■□□□□ 0.04
Metazoa_SRP.60-201ENST00000616888 WRNQ14191 1432 aaPredicted RBP eCLIP15.26■□□□□ 0.03
Metazoa_SRP.60-201ENST00000616888 EVX2Q03828 476 aa15.21■□□□□ 0.03
Metazoa_SRP.60-201ENST00000616888 CC2D2AQ9P2K1 1620 aa15.21■□□□□ 0.02
Metazoa_SRP.60-201ENST00000616888 EEA1Q15075 1411 aa15.18■□□□□ 0.02
Metazoa_SRP.60-201ENST00000616888 PRR29P0C7W0 189 aa15.12■□□□□ 0.01
Metazoa_SRP.60-201ENST00000616888 C19orf67A6NJJ6 358 aa15.1■□□□□ 0.01
Metazoa_SRP.60-201ENST00000616888 CFTRP13569 1480 aa15.09■□□□□ 0.01
Metazoa_SRP.60-201ENST00000616888 SOGA1O94964 1423 aa15.09■□□□□ 0.01
Metazoa_SRP.60-201ENST00000616888 SYNJ1O43426 1573 aa15.07■□□□□ 0
Metazoa_SRP.60-201ENST00000616888 UBTFP17480 764 aaKnown RBP15.07■□□□□ 0
Metazoa_SRP.60-201ENST00000616888 CADPSQ9ULU8 1353 aa15.07■□□□□ 0
Metazoa_SRP.60-201ENST00000616888 CHADLQ6NUI6 762 aa15.03■□□□□ -0
Metazoa_SRP.60-201ENST00000616888 TOP2BQ02880 1626 aa15.02□□□□□ -0.01
Metazoa_SRP.60-201ENST00000616888 PCGF6Q9BYE7 350 aa15.01□□□□□ -0.01
Metazoa_SRP.60-201ENST00000616888 GOLGA3Q08378 1498 aa14.98□□□□□ -0.01
Metazoa_SRP.60-201ENST00000616888 RUSC2Q8N2Y8 1516 aa14.97□□□□□ -0.01
Metazoa_SRP.60-201ENST00000616888 BIVM-ERCC5R4GMW8 1640 aa14.96□□□□□ -0.01
Metazoa_SRP.60-201ENST00000616888 CEP164Q9UPV0 1460 aa14.95□□□□□ -0.02
Metazoa_SRP.60-201ENST00000616888 TRIM26Q12899 539 aaPredicted RBP14.95□□□□□ -0.02
Metazoa_SRP.60-201ENST00000616888 PRDM2Q13029 1718 aa14.95□□□□□ -0.02
Metazoa_SRP.60-201ENST00000616888 GABBR2O75899 941 aa14.94□□□□□ -0.02
Metazoa_SRP.60-201ENST00000616888 TNIKQ9UKE5 1360 aa14.94□□□□□ -0.02
Metazoa_SRP.60-201ENST00000616888 CUX1P39880 1505 aa14.92□□□□□ -0.02
Metazoa_SRP.60-201ENST00000616888 FANCD2Q9BXW9 1451 aa14.91□□□□□ -0.02
Metazoa_SRP.60-201ENST00000616888 KIF27Q86VH2 1401 aa14.91□□□□□ -0.02
Metazoa_SRP.60-201ENST00000616888 CEP162Q5TB80 1403 aa14.88□□□□□ -0.03
Metazoa_SRP.60-201ENST00000616888 KIF21BO75037 1637 aa14.86□□□□□ -0.03
Metazoa_SRP.60-201ENST00000616888 LAMC3Q9Y6N6 1575 aa14.85□□□□□ -0.03
Metazoa_SRP.60-201ENST00000616888 PDS5BQ9NTI5 1447 aa14.84□□□□□ -0.03
Metazoa_SRP.60-201ENST00000616888 FARP1Q9Y4F1 1045 aaPredicted RBP14.83□□□□□ -0.04
Metazoa_SRP.60-201ENST00000616888 NESP48681 1621 aa14.81□□□□□ -0.04
Metazoa_SRP.60-201ENST00000616888 CD44P16070 742 aaKnown RBP14.81□□□□□ -0.04
Metazoa_SRP.60-201ENST00000616888 RANGAP1P46060 587 aaPredicted RBP14.8□□□□□ -0.04
Metazoa_SRP.60-201ENST00000616888 CUX2O14529 1486 aa14.8□□□□□ -0.04
Metazoa_SRP.60-201ENST00000616888 FGD5Q6ZNL6 1462 aa14.79□□□□□ -0.04
Metazoa_SRP.60-201ENST00000616888 DNMBPQ6XZF7 1577 aa14.77□□□□□ -0.04
Metazoa_SRP.60-201ENST00000616888 CLCN6P51797 869 aa14.77□□□□□ -0.05
Metazoa_SRP.60-201ENST00000616888 RAPGEF2Q9Y4G8 1499 aa14.76□□□□□ -0.05
Metazoa_SRP.60-201ENST00000616888 CLIP1P30622 1438 aa14.76□□□□□ -0.05
Metazoa_SRP.60-201ENST00000616888 PPARGC1BQ86YN6 1023 aaKnown RBP14.76□□□□□ -0.05
Metazoa_SRP.60-201ENST00000616888 STAG3Q9UJ98 1225 aa14.75□□□□□ -0.05
Metazoa_SRP.60-201ENST00000616888 ERICH3Q5RHP9 1530 aa14.74□□□□□ -0.05
Metazoa_SRP.60-201ENST00000616888 TOPBP1Q92547 1522 aa14.72□□□□□ -0.05
Metazoa_SRP.60-201ENST00000616888 SPDYE4A6NLX3 237 aa14.72□□□□□ -0.05
Metazoa_SRP.60-201ENST00000616888 LHX8Q68G74 356 aa14.72□□□□□ -0.05
Metazoa_SRP.60-201ENST00000616888 PRXQ9BXM0 1461 aa14.7□□□□□ -0.06
Metazoa_SRP.60-201ENST00000616888 TTBK1Q5TCY1 1321 aaPredicted RBP14.68□□□□□ -0.06
Metazoa_SRP.60-201ENST00000616888 HRCP23327 699 aa14.68□□□□□ -0.06
Metazoa_SRP.60-201ENST00000616888 CARMIL1Q5VZK9 1371 aa14.67□□□□□ -0.06
Metazoa_SRP.60-201ENST00000616888 POLA1P09884 1462 aaPredicted RBP14.66□□□□□ -0.06
Metazoa_SRP.60-201ENST00000616888 RAD54L2Q9Y4B4 1467 aa14.65□□□□□ -0.06
Metazoa_SRP.60-201ENST00000616888 IGF1RP08069 1367 aa14.65□□□□□ -0.06
Metazoa_SRP.60-201ENST00000616888 URB2Q14146 1524 aaKnown RBP14.63□□□□□ -0.07
Metazoa_SRP.60-201ENST00000616888 ABCA10Q8WWZ4 1543 aa14.63□□□□□ -0.07
Metazoa_SRP.60-201ENST00000616888 VPS8Q8N3P4 1428 aa14.61□□□□□ -0.07
Metazoa_SRP.60-201ENST00000616888 FKBP8Q14318 412 aa14.6□□□□□ -0.07
Metazoa_SRP.60-201ENST00000616888 KIF21AQ7Z4S6 1674 aa14.59□□□□□ -0.07
Metazoa_SRP.60-201ENST00000616888 MRC2Q9UBG0 1479 aa14.59□□□□□ -0.07
Metazoa_SRP.60-201ENST00000616888 ERCC6Q03468 1493 aa14.58□□□□□ -0.08
Metazoa_SRP.60-201ENST00000616888 CREBZFQ9NS37 354 aa14.58□□□□□ -0.08
Metazoa_SRP.60-201ENST00000616888 ZEB1P37275 1124 aaPredicted RBP14.57□□□□□ -0.08
Metazoa_SRP.60-201ENST00000616888 DCBLD2Q96PD2 775 aa14.57□□□□□ -0.08
Metazoa_SRP.60-201ENST00000616888 ZRANB1Q9UGI0 708 aa14.57□□□□□ -0.08
Metazoa_SRP.60-201ENST00000616888 POTEIP0CG38 1075 aa14.54□□□□□ -0.08
Metazoa_SRP.60-201ENST00000616888 ZNF579Q8NAF0 562 aaKnown RBP14.54□□□□□ -0.08
Metazoa_SRP.60-201ENST00000616888 TDRD9Q8NDG6 1382 aaKnown RBP14.54□□□□□ -0.08
Metazoa_SRP.60-201ENST00000616888 CUL7Q14999 1698 aa14.53□□□□□ -0.08
Metazoa_SRP.60-201ENST00000616888 GAPVD1Q14C86 1478 aa14.53□□□□□ -0.08
Metazoa_SRP.60-201ENST00000616888 PAK3O75914 559 aaPredicted RBP14.49□□□□□ -0.09
Metazoa_SRP.60-201ENST00000616888 ARAP1Q96P48 1450 aa14.47□□□□□ -0.09
Metazoa_SRP.60-201ENST00000616888 ATP1B4Q9UN42 357 aaPredicted RBP14.47□□□□□ -0.09
Metazoa_SRP.60-201ENST00000616888 IFT140Q96RY7 1462 aa14.45□□□□□ -0.1
Metazoa_SRP.60-201ENST00000616888 WDR97A6NE52 1622 aa14.45□□□□□ -0.1
Metazoa_SRP.60-201ENST00000616888 NPM1P06748 294 aaKnown RBP eCLIP14.45□□□□□ -0.1
Metazoa_SRP.60-201ENST00000616888 ABCA5Q8WWZ7 1642 aa14.44□□□□□ -0.1
Metazoa_SRP.60-201ENST00000616888 ARHGAP35Q9NRY4 1499 aa14.44□□□□□ -0.1
Metazoa_SRP.60-201ENST00000616888 P3H3Q8IVL6 736 aa14.43□□□□□ -0.1
Metazoa_SRP.60-201ENST00000616888 CCER1Q8TC90 406 aaPredicted RBP14.43□□□□□ -0.1
Metazoa_SRP.60-201ENST00000616888 PROM2Q8N271 834 aa14.42□□□□□ -0.1
Metazoa_SRP.60-201ENST00000616888 FHAD1B1AJZ9 1412 aa14.41□□□□□ -0.1
Metazoa_SRP.60-201ENST00000616888 WDR62O43379 1518 aa14.41□□□□□ -0.1
Metazoa_SRP.60-201ENST00000616888 TARBP1Q13395 1621 aaKnown RBP14.4□□□□□ -0.1
Metazoa_SRP.60-201ENST00000616888 GRIN2BQ13224 1484 aa14.39□□□□□ -0.11
Metazoa_SRP.60-201ENST00000616888 AQRO60306 1485 aaKnown RBP eCLIP14.38□□□□□ -0.11
Metazoa_SRP.60-201ENST00000616888 EFCAB5A4FU69 1503 aa14.38□□□□□ -0.11
Metazoa_SRP.60-201ENST00000616888 CTTNBP2Q8WZ74 1663 aa14.36□□□□□ -0.11
Metazoa_SRP.60-201ENST00000616888 GALR2O43603 387 aaPredicted RBP14.35□□□□□ -0.11
Metazoa_SRP.60-201ENST00000616888 PBRM1Q86U86 1689 aa14.34□□□□□ -0.11
Metazoa_SRP.60-201ENST00000616888 FHOD3Q2V2M9 1422 aa14.32□□□□□ -0.12
Metazoa_SRP.60-201ENST00000616888 FMN1Q68DA7 1419 aa14.32□□□□□ -0.12
Metazoa_SRP.60-201ENST00000616888 KANK4Q5T7N3 995 aaPredicted RBP14.3□□□□□ -0.12
Metazoa_SRP.60-201ENST00000616888 CHMP7Q8WUX9 453 aaPredicted RBP14.29□□□□□ -0.12
Metazoa_SRP.60-201ENST00000616888 PHF12Q96QT6 1004 aa14.29□□□□□ -0.12
Metazoa_SRP.60-201ENST00000616888 ADAMTS12P58397 1594 aa14.28□□□□□ -0.12
Metazoa_SRP.60-201ENST00000616888 ZNF608Q9ULD9 1512 aaPredicted RBP14.28□□□□□ -0.12
Metazoa_SRP.60-201ENST00000616888 THOC2Q8NI27 1593 aaKnown RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms