RNA–Protein interactions for RNA: ENST00000616888.1

Metazoa_SRP.60-201, humanhuman

BASIC

Gene Metazoa_SRP, Length 305 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Metazoa_SRP.60-201ENST00000616888 AEBP2Q6ZN18 517 aaPredicted RBP28.78■■■□□ 2.2
Metazoa_SRP.60-201ENST00000616888 CHIC1Q5VXU3 224 aa27.2■■□□□ 1.94
Metazoa_SRP.60-201ENST00000616888 SENP3Q9H4L4 574 aaPredicted RBP24.74■■□□□ 1.55
Metazoa_SRP.60-201ENST00000616888 PHF23Q9BUL5 403 aaPredicted RBP24.35■■□□□ 1.49
Metazoa_SRP.60-201ENST00000616888 FOXD1Q16676 465 aa22.99■■□□□ 1.27
Metazoa_SRP.60-201ENST00000616888 MSH5O43196 834 aa21.72■■□□□ 1.07
Metazoa_SRP.60-201ENST00000616888 PLPPR3Q6T4P5 718 aa21.7■■□□□ 1.06
Metazoa_SRP.60-201ENST00000616888 POTEDQ86YR6 584 aa21.49■■□□□ 1.03
Metazoa_SRP.60-201ENST00000616888 PIAS4Q8N2W9 510 aaPredicted RBP21.49■■□□□ 1.03
Metazoa_SRP.60-201ENST00000616888 PPP6R1Q9UPN7 881 aa21.28■■□□□ 1
Metazoa_SRP.60-201ENST00000616888 ADRA2BP18089 450 aa21.24■□□□□ 0.99
Metazoa_SRP.60-201ENST00000616888 NISCHQ9Y2I1 1504 aa20.67■□□□□ 0.9
Metazoa_SRP.60-201ENST00000616888 SCAF1Q9H7N4 1312 aaKnown RBP19.61■□□□□ 0.73
Metazoa_SRP.60-201ENST00000616888 MAPK8IP2Q13387 824 aaPredicted RBP19.56■□□□□ 0.72
Metazoa_SRP.60-201ENST00000616888 DMRT2Q9Y5R5 561 aa19.54■□□□□ 0.72
Metazoa_SRP.60-201ENST00000616888 PPP4R3CPQ6ZMV5 832 aa18.96■□□□□ 0.63
Metazoa_SRP.60-201ENST00000616888 DCAF8L1A6NGE4 600 aa18.82■□□□□ 0.6
Metazoa_SRP.60-201ENST00000616888 CACNB1Q02641 598 aaPredicted RBP18.77■□□□□ 0.6
Metazoa_SRP.60-201ENST00000616888 HOXD11P31277 338 aaPredicted RBP18.73■□□□□ 0.59
Metazoa_SRP.60-201ENST00000616888 CNKSR2Q8WXI2 1034 aa18.68■□□□□ 0.58
Metazoa_SRP.60-201ENST00000616888 RNF216Q9NWF9 866 aaPredicted RBP18.56■□□□□ 0.56
Metazoa_SRP.60-201ENST00000616888 RNF39Q9H2S5 420 aa18.43■□□□□ 0.54
Metazoa_SRP.60-201ENST00000616888 NCBP3Q53F19 620 aaKnown RBP18.26■□□□□ 0.51
Metazoa_SRP.60-201ENST00000616888 C1QBPQ07021 282 aaKnown RBP18.23■□□□□ 0.51
Metazoa_SRP.60-201ENST00000616888 DNAJC5BQ9UF47 199 aa18.19■□□□□ 0.5
Metazoa_SRP.60-201ENST00000616888 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.92■□□□□ 0.46
Metazoa_SRP.60-201ENST00000616888 CCDC180Q9P1Z9 1646 aa17.9■□□□□ 0.46
Metazoa_SRP.60-201ENST00000616888 NPM3O75607 178 aaKnown RBP17.85■□□□□ 0.45
Metazoa_SRP.60-201ENST00000616888 KCNA4P22459 653 aa17.75■□□□□ 0.43
Metazoa_SRP.60-201ENST00000616888 U3KPZ7 1027 aaPredicted RBP17.42■□□□□ 0.38
Metazoa_SRP.60-201ENST00000616888 DCAF8L2P0C7V8 631 aa17.37■□□□□ 0.37
Metazoa_SRP.60-201ENST00000616888 ZCCHC6Q5VYS8 1495 aaKnown RBP17.37■□□□□ 0.37
Metazoa_SRP.60-201ENST00000616888 CAPN15O75808 1086 aa17.3■□□□□ 0.36
Metazoa_SRP.60-201ENST00000616888 SPINK5Q9NQ38 1064 aaPredicted RBP17.23■□□□□ 0.35
Metazoa_SRP.60-201ENST00000616888 SHROOM4Q9ULL8 1493 aa17.2■□□□□ 0.34
Metazoa_SRP.60-201ENST00000616888 DSG3P32926 999 aa17.19■□□□□ 0.34
Metazoa_SRP.60-201ENST00000616888 APLP2Q06481 763 aa17.1■□□□□ 0.33
Metazoa_SRP.60-201ENST00000616888 SLC4A2P04920 1241 aa17.08■□□□□ 0.32
Metazoa_SRP.60-201ENST00000616888 DCAF1Q9Y4B6 1507 aa17.04■□□□□ 0.32
Metazoa_SRP.60-201ENST00000616888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.01■□□□□ 0.31
Metazoa_SRP.60-201ENST00000616888 HNRNPUL2Q1KMD3 747 aaKnown RBP17.01■□□□□ 0.31
Metazoa_SRP.60-201ENST00000616888 TRHP20396 242 aaPredicted RBP16.96■□□□□ 0.31
Metazoa_SRP.60-201ENST00000616888 ZNF219Q9P2Y4 722 aaPredicted RBP16.95■□□□□ 0.3
Metazoa_SRP.60-201ENST00000616888 ABCC9O60706 1549 aa16.9■□□□□ 0.3
Metazoa_SRP.60-201ENST00000616888 SLC4A1APQ9BWU0 796 aaKnown RBP16.89■□□□□ 0.29
Metazoa_SRP.60-201ENST00000616888 SAMD1Q6SPF0 538 aaPredicted RBP16.86■□□□□ 0.29
Metazoa_SRP.60-201ENST00000616888 POTEHQ6S545 545 aa16.83■□□□□ 0.28
Metazoa_SRP.60-201ENST00000616888 ABCB7O75027 752 aa16.81■□□□□ 0.28
Metazoa_SRP.60-201ENST00000616888 MYO15BQ96JP2 1530 aa16.75■□□□□ 0.27
Metazoa_SRP.60-201ENST00000616888 SUPT5HO00267 1087 aaKnown RBP16.72■□□□□ 0.27
Metazoa_SRP.60-201ENST00000616888 NACADO15069 1562 aa16.69■□□□□ 0.26
Metazoa_SRP.60-201ENST00000616888 SCRIBQ14160 1630 aa16.59■□□□□ 0.25
Metazoa_SRP.60-201ENST00000616888 MYCNP04198 464 aaPredicted RBP16.58■□□□□ 0.24
Metazoa_SRP.60-201ENST00000616888 RB1CC1Q8TDY2 1594 aa16.55■□□□□ 0.24
Metazoa_SRP.60-201ENST00000616888 RBM42Q9BTD8 480 aaKnown RBP16.53■□□□□ 0.24
Metazoa_SRP.60-201ENST00000616888 POLA2Q14181 598 aa16.44■□□□□ 0.22
Metazoa_SRP.60-201ENST00000616888 FOXD4L1Q9NU39 408 aa16.39■□□□□ 0.21
Metazoa_SRP.60-201ENST00000616888 ZBTB22O15209 634 aa16.32■□□□□ 0.2
Metazoa_SRP.60-201ENST00000616888 EHMT2Q96KQ7 1210 aa16.26■□□□□ 0.19
Metazoa_SRP.60-201ENST00000616888 CHRDL2Q6WN34 429 aa16.17■□□□□ 0.18
Metazoa_SRP.60-201ENST00000616888 ZBTB12Q9Y330 459 aaPredicted RBP16.16■□□□□ 0.18
Metazoa_SRP.60-201ENST00000616888 RSF1Q96T23 1441 aaPredicted RBP16.12■□□□□ 0.17
Metazoa_SRP.60-201ENST00000616888 CSRNP3Q8WYN3 585 aa16.11■□□□□ 0.17
Metazoa_SRP.60-201ENST00000616888 ATF5Q9Y2D1 282 aaPredicted RBP16.09■□□□□ 0.17
Metazoa_SRP.60-201ENST00000616888 AKT1S1Q96B36 256 aa16.05■□□□□ 0.16
Metazoa_SRP.60-201ENST00000616888 PABPN1Q86U42 306 aaKnown RBP eCLIP16.03■□□□□ 0.16
Metazoa_SRP.60-201ENST00000616888 CECR2Q9BXF3 1484 aa16.03■□□□□ 0.16
Metazoa_SRP.60-201ENST00000616888 BAZ1AQ9NRL2 1556 aaPredicted RBP16■□□□□ 0.15
Metazoa_SRP.60-201ENST00000616888 UNC13AQ9UPW8 1703 aa15.99■□□□□ 0.15
Metazoa_SRP.60-201ENST00000616888 MROH2BQ7Z745 1585 aa15.96■□□□□ 0.15
Metazoa_SRP.60-201ENST00000616888 OSCARQ8IYS5 282 aa15.88■□□□□ 0.13
Metazoa_SRP.60-201ENST00000616888 REM2Q8IYK8 340 aaPredicted RBP15.86■□□□□ 0.13
Metazoa_SRP.60-201ENST00000616888 BICRAQ9NZM4 1560 aa15.86■□□□□ 0.13
Metazoa_SRP.60-201ENST00000616888 WIZO95785 1651 aa15.85■□□□□ 0.13
Metazoa_SRP.60-201ENST00000616888 SMARCA4P51532 1647 aa15.84■□□□□ 0.13
Metazoa_SRP.60-201ENST00000616888 ATXN8OSP0DMR3 200 aa15.83■□□□□ 0.12
Metazoa_SRP.60-201ENST00000616888 TOP2AP11388 1531 aaKnown RBP15.73■□□□□ 0.11
Metazoa_SRP.60-201ENST00000616888 PIP4P2Q8N4L2 257 aa15.71■□□□□ 0.11
Metazoa_SRP.60-201ENST00000616888 TRIM41Q8WV44 630 aa15.71■□□□□ 0.11
Metazoa_SRP.60-201ENST00000616888 SP7Q8TDD2 431 aaPredicted RBP15.68■□□□□ 0.1
Metazoa_SRP.60-201ENST00000616888 FBLN2P98095 1184 aa15.67■□□□□ 0.1
Metazoa_SRP.60-201ENST00000616888 PITPNM1O00562 1244 aa15.66■□□□□ 0.1
Metazoa_SRP.60-201ENST00000616888 SPDYE2BA6NHP3 402 aa15.61■□□□□ 0.09
Metazoa_SRP.60-201ENST00000616888 SPDYE6P0CI01 402 aa15.61■□□□□ 0.09
Metazoa_SRP.60-201ENST00000616888 SPDYE2Q495Y8 402 aa15.61■□□□□ 0.09
Metazoa_SRP.60-201ENST00000616888 SMARCA2P51531 1590 aa15.61■□□□□ 0.09
Metazoa_SRP.60-201ENST00000616888 FXR2P51116 673 aaKnown RBP eCLIP15.59■□□□□ 0.09
Metazoa_SRP.60-201ENST00000616888 CCDC88BA6NC98 1476 aa15.58■□□□□ 0.08
Metazoa_SRP.60-201ENST00000616888 BAZ1BQ9UIG0 1483 aaKnown RBP15.58■□□□□ 0.08
Metazoa_SRP.60-201ENST00000616888 HAX1O00165 279 aa15.57■□□□□ 0.08
Metazoa_SRP.60-201ENST00000616888 ATAD2BQ9ULI0 1458 aa15.56■□□□□ 0.08
Metazoa_SRP.60-201ENST00000616888 PEG3Q9GZU2 1588 aa15.56■□□□□ 0.08
Metazoa_SRP.60-201ENST00000616888 EIF4G1Q04637 1599 aaKnown RBP15.47■□□□□ 0.07
Metazoa_SRP.60-201ENST00000616888 FAM9AQ8IZU1 332 aaPredicted RBP15.46■□□□□ 0.07
Metazoa_SRP.60-201ENST00000616888 LOC105371045A0A1W2PR82 267 aa15.4■□□□□ 0.06
Metazoa_SRP.60-201ENST00000616888 SPDYE1Q8NFV5 336 aaPredicted RBP15.4■□□□□ 0.06
Metazoa_SRP.60-201ENST00000616888 ZNF692Q9BU19 519 aaPredicted RBP15.39■□□□□ 0.05
Metazoa_SRP.60-201ENST00000616888 CLEC11AQ9Y240 323 aa15.38■□□□□ 0.05
Metazoa_SRP.60-201ENST00000616888 NCAPD3P42695 1498 aa15.38■□□□□ 0.05
Metazoa_SRP.60-201ENST00000616888 HMGXB3Q12766 1538 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms