RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C SLD5Q03406 294 aa5.49□□□□□ -1.53
RAT1YOR048C CSN9Q03981 162 aa5.49□□□□□ -1.53
RAT1YOR048C NSE1Q07913 336 aa5.49□□□□□ -1.53
RAT1YOR048C YPR089WO13585 888 aa5.49□□□□□ -1.53
RAT1YOR048C ADE4P04046 510 aaKnown RBP5.49□□□□□ -1.53
RAT1YOR048C PDR1P12383 1068 aa5.49□□□□□ -1.53
RAT1YOR048C IDI1P15496 288 aa5.49□□□□□ -1.53
RAT1YOR048C YDJ1P25491 409 aaKnown RBP5.49□□□□□ -1.53
RAT1YOR048C GID7P25569 745 aa5.49□□□□□ -1.53
RAT1YOR048C SEC6P32844 805 aa5.49□□□□□ -1.53
RAT1YOR048C SEC31P38968 1273 aaKnown RBP5.49□□□□□ -1.53
RAT1YOR048C STL1P39932 569 aa5.49□□□□□ -1.53
RAT1YOR048C NIT1P40447 199 aa5.49□□□□□ -1.53
RAT1YOR048C YIL054WP40524 105 aa5.49□□□□□ -1.53
RAT1YOR048C SPR3P41901 512 aa5.49□□□□□ -1.53
RAT1YOR048C BNA3P47039 444 aaKnown RBP5.49□□□□□ -1.53
RAT1YOR048C KTR5P53966 522 aaPredicted RBP5.49□□□□□ -1.53
RAT1YOR048C ADY3Q07732 790 aa5.49□□□□□ -1.53
RAT1YOR048C GPN2Q08726 347 aaPredicted RBP5.49□□□□□ -1.53
RAT1YOR048C TMA46Q12000 345 aaKnown RBP5.49□□□□□ -1.53
RAT1YOR048C RIF1P29539 1916 aa5.49□□□□□ -1.53
RAT1YOR048C PMS1P14242 873 aa5.48□□□□□ -1.53
RAT1YOR048C RGR1P19263 1082 aa5.48□□□□□ -1.53
RAT1YOR048C FRE1P32791 686 aa5.48□□□□□ -1.53
RAT1YOR048C NUF2P33895 451 aa5.48□□□□□ -1.53
RAT1YOR048C YKL222CP35995 705 aa5.48□□□□□ -1.53
RAT1YOR048C RRP14P36080 434 aaKnown RBP5.48□□□□□ -1.53
RAT1YOR048C NOP9P47077 666 aaKnown RBP5.48□□□□□ -1.53
RAT1YOR048C SQS1P53866 767 aaKnown RBP5.48□□□□□ -1.53
RAT1YOR048C SNU56Q03782 492 aaKnown RBP5.48□□□□□ -1.53
RAT1YOR048C ATG26Q06321 1198 aa5.48□□□□□ -1.53
RAT1YOR048C MET7Q08645 548 aa5.48□□□□□ -1.53
RAT1YOR048C CIR2Q08822 631 aa5.48□□□□□ -1.53
RAT1YOR048C SUI3P09064 285 aaKnown RBP5.48□□□□□ -1.53
RAT1YOR048C SNA3P14359 133 aa5.48□□□□□ -1.53
RAT1YOR048C VMA1P17255 1071 aaKnown RBP5.48□□□□□ -1.53
RAT1YOR048C DEF1P35732 738 aaKnown RBP5.48□□□□□ -1.53
RAT1YOR048C ASK1P35734 292 aa5.48□□□□□ -1.53
RAT1YOR048C MCR1P36060 302 aaKnown RBP5.48□□□□□ -1.53
RAT1YOR048C CUE2P36075 443 aaKnown RBP5.48□□□□□ -1.53
RAT1YOR048C RRT6P53117 311 aaPredicted RBP5.48□□□□□ -1.53
RAT1YOR048C YMR030W-AQ3E760 96 aa5.48□□□□□ -1.53
RAT1YOR048C FMP33P46998 180 aa5.48□□□□□ -1.53
RAT1YOR048C MON1P53129 644 aa5.48□□□□□ -1.53
RAT1YOR048C COG2P53271 262 aa5.48□□□□□ -1.53
RAT1YOR048C VPS9P54787 451 aa5.48□□□□□ -1.53
RAT1YOR048C FMN1Q03778 218 aa5.48□□□□□ -1.53
RAT1YOR048C COQ9Q05779 260 aa5.48□□□□□ -1.53
RAT1YOR048C SPH1Q06160 661 aa5.48□□□□□ -1.53
RAT1YOR048C UBX5Q06682 500 aa5.48□□□□□ -1.53
RAT1YOR048C RPN8Q08723 338 aaKnown RBP5.48□□□□□ -1.53
RAT1YOR048C IOC2Q12072 812 aa5.48□□□□□ -1.53
RAT1YOR048C TCP1P12612 559 aaKnown RBP5.47□□□□□ -1.53
RAT1YOR048C MSM1P22438 575 aa5.47□□□□□ -1.53
RAT1YOR048C NGG1P32494 702 aa5.47□□□□□ -1.53
RAT1YOR048C RPT5P33297 434 aaKnown RBP5.47□□□□□ -1.53
RAT1YOR048C BEM4P39011 633 aa5.47□□□□□ -1.53
RAT1YOR048C PRK1P40494 810 aa5.47□□□□□ -1.53
RAT1YOR048C RSC8P43609 557 aaKnown RBP5.47□□□□□ -1.53
RAT1YOR048C TEL2P53038 688 aa5.47□□□□□ -1.53
RAT1YOR048C PRO2P54885 456 aaKnown RBP5.47□□□□□ -1.53
RAT1YOR048C BCP1Q06338 283 aa5.47□□□□□ -1.53
RAT1YOR048C GPR1Q12361 961 aa5.47□□□□□ -1.53
RAT1YOR048C SPE4Q12455 300 aa5.47□□□□□ -1.53
RAT1YOR048C ADF1Q2V2Q1 113 aa5.47□□□□□ -1.53
RAT1YOR048C SPE1P08432 466 aa5.47□□□□□ -1.53
RAT1YOR048C COT1P32798 439 aa5.47□□□□□ -1.53
RAT1YOR048C SLA2P33338 968 aa5.47□□□□□ -1.53
RAT1YOR048C TSC10P38342 320 aa5.47□□□□□ -1.53
RAT1YOR048C TGL3P40308 642 aa5.47□□□□□ -1.53
RAT1YOR048C DAK1P54838 584 aaKnown RBP5.47□□□□□ -1.53
RAT1YOR048C ROD1Q02805 837 aa5.47□□□□□ -1.53
RAT1YOR048C DOT1Q04089 582 aaKnown RBP5.47□□□□□ -1.53
RAT1YOR048C THI20Q08224 551 aa5.47□□□□□ -1.53
RAT1YOR048C ERG12P07277 443 aa5.46□□□□□ -1.53
RAT1YOR048C MSD1P15179 658 aaKnown RBP5.46□□□□□ -1.53
RAT1YOR048C SEC1P30619 724 aaKnown RBP5.46□□□□□ -1.53
RAT1YOR048C EFT1P32324 842 aaKnown RBP5.46□□□□□ -1.53
RAT1YOR048C GDA1P32621 518 aa5.46□□□□□ -1.53
RAT1YOR048C ABD1P32783 436 aaPredicted RBP5.46□□□□□ -1.53
RAT1YOR048C TDP1P38319 544 aa5.46□□□□□ -1.53
RAT1YOR048C SCC4P40090 624 aa5.46□□□□□ -1.53
RAT1YOR048C YER156CP40093 338 aaKnown RBP5.46□□□□□ -1.53
RAT1YOR048C ULI1P43604 169 aa5.46□□□□□ -1.53
RAT1YOR048C GRX3Q03835 250 aa5.46□□□□□ -1.53
RAT1YOR048C RKM2Q03942 479 aa5.46□□□□□ -1.53
RAT1YOR048C YMR321CQ04898 105 aa5.46□□□□□ -1.53
RAT1YOR048C RSA3Q05942 220 aaKnown RBP5.46□□□□□ -1.53
RAT1YOR048C TSR2Q06672 205 aaKnown RBP5.46□□□□□ -1.53
RAT1YOR048C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.46□□□□□ -1.53not detected
RAT1YOR048C SAM3Q08986 587 aa5.46□□□□□ -1.53
RAT1YOR048C LDB17Q12342 491 aa5.46□□□□□ -1.53
RAT1YOR048C NUP60P39705 539 aa5.46□□□□□ -1.54
RAT1YOR048C SLX8P40072 274 aa5.46□□□□□ -1.54
RAT1YOR048C SNZ3P43545 298 aa5.46□□□□□ -1.54
RAT1YOR048C SOL4P53315 255 aa5.46□□□□□ -1.54
RAT1YOR048C SNZ2P53824 298 aa5.46□□□□□ -1.54
RAT1YOR048C CDC55Q00362 526 aa5.46□□□□□ -1.54
RAT1YOR048C ADI1Q03677 179 aa5.46□□□□□ -1.54
RAT1YOR048C SMC5Q08204 1093 aa5.46□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms