RNA–Protein interactions for RNA: YLR320W

MMS22, Transcript of Subunit of E3 ubiquitin ligase complex involved in replication repair, yeastyeast

Gene MMS22, Length 4,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MMS22YLR320W TPO1Q07824 586 aa2.41□□□□□ -2.02
MMS22YLR320W GET3Q12154 354 aaKnown RBP2.41□□□□□ -2.02
MMS22YLR320W FRE6Q12473 712 aa2.41□□□□□ -2.02
MMS22YLR320W YAP6Q03935 383 aa2.4□□□□□ -2.02
MMS22YLR320W YDR215CQ12240 137 aa2.4□□□□□ -2.02
MMS22YLR320W MED1Q12321 566 aa2.4□□□□□ -2.02
MMS22YLR320W PAR32Q12515 295 aaKnown RBP2.4□□□□□ -2.02
MMS22YLR320W CDC16P09798 840 aa2.4□□□□□ -2.03
MMS22YLR320W ESL1P40456 1118 aa2.4□□□□□ -2.03
MMS22YLR320W PRP4P20053 465 aaKnown RBP2.4□□□□□ -2.03
MMS22YLR320W RXT2P38255 430 aa2.4□□□□□ -2.03
MMS22YLR320W SKN7P38889 622 aa2.4□□□□□ -2.03
MMS22YLR320W YMR124WP39523 943 aaKnown RBP2.4□□□□□ -2.03
MMS22YLR320W MTC3P53077 123 aa2.4□□□□□ -2.03
MMS22YLR320W ARA2Q04212 335 aa2.4□□□□□ -2.03
MMS22YLR320W AIM41Q12032 185 aa2.4□□□□□ -2.03
MMS22YLR320W KOG1P38873 1557 aa2.4□□□□□ -2.03
MMS22YLR320W ADE2P21264 571 aaKnown RBP2.4□□□□□ -2.03
MMS22YLR320W ICP55P40051 511 aa2.4□□□□□ -2.03
MMS22YLR320W CCT5P40413 562 aaKnown RBP2.4□□□□□ -2.03
MMS22YLR320W SSU1P41930 458 aa2.4□□□□□ -2.03
MMS22YLR320W DUG1P43616 481 aaKnown RBP2.4□□□□□ -2.03
MMS22YLR320W CDC26P14724 124 aa2.39□□□□□ -2.03
MMS22YLR320W YCK1P23291 538 aa2.39□□□□□ -2.03
MMS22YLR320W TFB1P32776 642 aa2.39□□□□□ -2.03
MMS22YLR320W ALY1P36117 915 aa2.39□□□□□ -2.03
MMS22YLR320W YBL029WP38201 376 aa2.39□□□□□ -2.03
MMS22YLR320W YJR061WP40355 935 aa2.39□□□□□ -2.03
MMS22YLR320W RMD8P43620 662 aa2.39□□□□□ -2.03
MMS22YLR320W IRC8P47046 822 aa2.39□□□□□ -2.03
MMS22YLR320W NNF2P53253 936 aa2.39□□□□□ -2.03
MMS22YLR320W YOL159C-AQ3E769 90 aa2.39□□□□□ -2.03
MMS22YLR320W HSF1P10961 833 aa2.39□□□□□ -2.03
MMS22YLR320W MCM3P24279 971 aaKnown RBP2.39□□□□□ -2.03
MMS22YLR320W MRPL36P36531 177 aa2.39□□□□□ -2.03
MMS22YLR320W HOS4P40480 1083 aa2.39□□□□□ -2.03
MMS22YLR320W CTR1P49573 406 aa2.39□□□□□ -2.03
MMS22YLR320W DUG3P53871 357 aa2.39□□□□□ -2.03
MMS22YLR320W PSF3Q12146 194 aa2.39□□□□□ -2.03
MMS22YLR320W YPR053CQ6Q5F3 151 aa2.39□□□□□ -2.03
MMS22YLR320W SEC12P11655 471 aa2.39□□□□□ -2.03
MMS22YLR320W YHR112CP38716 378 aa2.39□□□□□ -2.03
MMS22YLR320W NOP2P40991 618 aaKnown RBP2.39□□□□□ -2.03
MMS22YLR320W PLB2Q03674 706 aa2.39□□□□□ -2.03
MMS22YLR320W FMP45Q07651 309 aa2.39□□□□□ -2.03
MMS22YLR320W TRP3P00937 484 aa2.38□□□□□ -2.03
MMS22YLR320W PRP28P23394 588 aa2.38□□□□□ -2.03
MMS22YLR320W PRE8P23639 250 aa2.38□□□□□ -2.03
MMS22YLR320W CRG1P38892 291 aaRIP-Chip data2.38□□□□□ -2.03not detected
MMS22YLR320W YML037CQ03703 340 aa2.38□□□□□ -2.03
MMS22YLR320W TGL5Q12043 749 aa2.38□□□□□ -2.03
MMS22YLR320W TRM13Q12383 476 aa2.38□□□□□ -2.03
MMS22YLR320W GAL80P04387 435 aa2.38□□□□□ -2.03
MMS22YLR320W SIP1P32578 815 aa2.38□□□□□ -2.03
MMS22YLR320W PAF1P38351 445 aa2.38□□□□□ -2.03
MMS22YLR320W SGF73P53165 657 aa2.38□□□□□ -2.03
MMS22YLR320W SPC98P53540 846 aa2.38□□□□□ -2.03
MMS22YLR320W RRP6Q12149 733 aaKnown RBP2.38□□□□□ -2.03
MMS22YLR320W SEC53P07283 254 aaKnown RBP2.38□□□□□ -2.03
MMS22YLR320W PRP2P20095 876 aaPredicted RBP2.38□□□□□ -2.03
MMS22YLR320W SRO9P25567 434 aaKnown RBP2.38□□□□□ -2.03
MMS22YLR320W MUP3P38734 546 aa2.38□□□□□ -2.03
MMS22YLR320W SSZ1P38788 538 aaKnown RBP2.38□□□□□ -2.03
MMS22YLR320W RIC1P40395 1056 aa2.38□□□□□ -2.03
MMS22YLR320W SPC19Q03954 165 aa2.38□□□□□ -2.03
MMS22YLR320W MSB1P21339 1137 aaKnown RBP2.38□□□□□ -2.03
MMS22YLR320W SAF1P38352 637 aa2.38□□□□□ -2.03
MMS22YLR320W SIT1P39980 628 aa2.38□□□□□ -2.03
MMS22YLR320W ARB1P40024 610 aaKnown RBP2.38□□□□□ -2.03
MMS22YLR320W EMP65P40085 556 aa2.38□□□□□ -2.03
MMS22YLR320W SDP1P40479 209 aa2.38□□□□□ -2.03
MMS22YLR320W CAF130P53280 1122 aaPredicted RBP2.38□□□□□ -2.03
MMS22YLR320W SEC5P89102 971 aa2.38□□□□□ -2.03
MMS22YLR320W VBA4Q04602 768 aaKnown RBP2.38□□□□□ -2.03
MMS22YLR320W CIA1Q05583 330 aa2.38□□□□□ -2.03
MMS22YLR320W IRC13Q08630 104 aa2.38□□□□□ -2.03
MMS22YLR320W CIR2Q08822 631 aa2.38□□□□□ -2.03
MMS22YLR320W COX1P00401 534 aa2.37□□□□□ -2.03
MMS22YLR320W ERG20P08524 352 aaKnown RBP2.37□□□□□ -2.03
MMS22YLR320W PAH1P32567 862 aa2.37□□□□□ -2.03
MMS22YLR320W NUP120P35729 1037 aa2.37□□□□□ -2.03
MMS22YLR320W RPP1P38786 293 aa2.37□□□□□ -2.03
MMS22YLR320W LTP1P40347 161 aa2.37□□□□□ -2.03
MMS22YLR320W YNR071CP53757 342 aa2.37□□□□□ -2.03
MMS22YLR320W KEL3Q08979 651 aaPredicted RBP2.37□□□□□ -2.03
MMS22YLR320W USV1Q12132 391 aa2.37□□□□□ -2.03
MMS22YLR320W CLF1Q12309 687 aaPredicted RBP2.37□□□□□ -2.03
MMS22YLR320W AI5_ALPHAQ9ZZX1 630 aa2.37□□□□□ -2.03
MMS22YLR320W SPE1P08432 466 aa2.37□□□□□ -2.03
MMS22YLR320W ERG8P24521 451 aa2.37□□□□□ -2.03
MMS22YLR320W SMI1P32566 505 aa2.37□□□□□ -2.03
MMS22YLR320W AKL1P38080 1108 aaKnown RBP2.37□□□□□ -2.03
MMS22YLR320W KAP123P40069 1113 aaKnown RBP2.37□□□□□ -2.03
MMS22YLR320W CIT3P43635 486 aa2.37□□□□□ -2.03
MMS22YLR320W MNT2P53059 558 aa2.37□□□□□ -2.03
MMS22YLR320W CSR1Q06705 408 aaKnown RBP2.37□□□□□ -2.03
MMS22YLR320W HFI1Q12060 488 aa2.37□□□□□ -2.03
MMS22YLR320W YLL058WQ12198 575 aa2.37□□□□□ -2.03
MMS22YLR320W SWI6P09959 803 aa2.37□□□□□ -2.03
MMS22YLR320W SGF29P25554 259 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 56.9 ms