RNA–Protein interactions for RNA: YLR035C-A

YLR035C-A, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR035C-A, Length 3,468 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR035C-AYLR035C-A SPT8P38915 602 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A CAJ1P39101 391 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A YEL068CP39977 110 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A GET2P40056 285 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A FAF1P40546 346 aaPredicted RBP1.91□□□□□ -2.1
YLR035C-AYLR035C-A DOT5P40553 215 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A YGR237CP50089 785 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A SPC98P53540 846 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A YLH47Q06493 454 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A GRC3Q07845 632 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A MRN1Q08925 612 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
YLR035C-AYLR035C-A YMR084WA2P2R3 262 aa1.9□□□□□ -2.1
YLR035C-AYLR035C-A KIN3P22209 435 aa1.9□□□□□ -2.1
YLR035C-AYLR035C-A SMY1P32364 656 aaKnown RBP1.9□□□□□ -2.1
YLR035C-AYLR035C-A HIR1P32479 840 aa1.9□□□□□ -2.1
YLR035C-AYLR035C-A NGG1P32494 702 aa1.9□□□□□ -2.1
YLR035C-AYLR035C-A SMI1P32566 505 aa1.9□□□□□ -2.1
YLR035C-AYLR035C-A ARC19P33204 171 aaKnown RBP1.9□□□□□ -2.1
YLR035C-AYLR035C-A CNS1P33313 385 aa1.9□□□□□ -2.1
YLR035C-AYLR035C-A SKI2P35207 1287 aaKnown RBP RIP-Chip data1.9□□□□□ -2.1not detected
YLR035C-AYLR035C-A RRN3P36070 627 aa1.9□□□□□ -2.1
YLR035C-AYLR035C-A MRPL40P36534 297 aa1.9□□□□□ -2.1
YLR035C-AYLR035C-A PCM1P38628 557 aaKnown RBP1.9□□□□□ -2.1
YLR035C-AYLR035C-A YHR033WP38690 423 aa1.9□□□□□ -2.1
YLR035C-AYLR035C-A FMO1P38866 432 aa1.9□□□□□ -2.1
YLR035C-AYLR035C-A DUN1P39009 513 aa1.9□□□□□ -2.1
YLR035C-AYLR035C-A RRP46P53256 223 aaPredicted RBP1.9□□□□□ -2.1
YLR035C-AYLR035C-A PXR1P53335 271 aaPredicted RBP1.9□□□□□ -2.1
YLR035C-AYLR035C-A INP2Q03824 705 aa1.9□□□□□ -2.1
YLR035C-AYLR035C-A CTK1Q03957 528 aaKnown RBP1.9□□□□□ -2.1
YLR035C-AYLR035C-A VHS3Q08438 674 aa1.9□□□□□ -2.1
YLR035C-AYLR035C-A MCH5Q08777 521 aa1.9□□□□□ -2.1
YLR035C-AYLR035C-A MDM12Q92328 271 aa1.9□□□□□ -2.1
YLR035C-AYLR035C-A HSH49Q99181 213 aaPredicted RBP1.9□□□□□ -2.1
YLR035C-AYLR035C-A TY1B-NL2Q99337 1749 aaKnown RBP1.9□□□□□ -2.1
YLR035C-AYLR035C-A SSM4P40318 1319 aa1.9□□□□□ -2.1
YLR035C-AYLR035C-A RPB4P20433 221 aaPredicted RBP1.9□□□□□ -2.11
YLR035C-AYLR035C-A MCM3P24279 971 aaKnown RBP1.9□□□□□ -2.11
YLR035C-AYLR035C-A POL4P25615 582 aa1.9□□□□□ -2.11
YLR035C-AYLR035C-A NIP100P33420 868 aa1.9□□□□□ -2.11
YLR035C-AYLR035C-A PHO11P35842 467 aa1.9□□□□□ -2.11
YLR035C-AYLR035C-A PHO12P38693 467 aa1.9□□□□□ -2.11
YLR035C-AYLR035C-A LSG1P53145 640 aaKnown RBP1.9□□□□□ -2.11
YLR035C-AYLR035C-A YMR210WQ03649 449 aa1.9□□□□□ -2.11
YLR035C-AYLR035C-A NDL1Q06568 189 aa1.9□□□□□ -2.11
YLR035C-AYLR035C-A MLH3Q12083 715 aa1.9□□□□□ -2.11
YLR035C-AYLR035C-A RPC40P07703 335 aaKnown RBP1.9□□□□□ -2.11
YLR035C-AYLR035C-A RNR1P21524 888 aaKnown RBP1.9□□□□□ -2.11
YLR035C-AYLR035C-A CLB1P24868 471 aa1.9□□□□□ -2.11
YLR035C-AYLR035C-A RAD51P25454 400 aa1.9□□□□□ -2.11
YLR035C-AYLR035C-A PAH1P32567 862 aa1.9□□□□□ -2.11
YLR035C-AYLR035C-A TOM71P38825 639 aaKnown RBP1.9□□□□□ -2.11
YLR035C-AYLR035C-A RIO2P40160 425 aaKnown RBP1.9□□□□□ -2.11
YLR035C-AYLR035C-A CAF16P43569 289 aa1.9□□□□□ -2.11
YLR035C-AYLR035C-A VTC2P43585 828 aa1.9□□□□□ -2.11
YLR035C-AYLR035C-A POL31P46957 487 aa1.9□□□□□ -2.11
YLR035C-AYLR035C-A ENP2P48234 707 aaKnown RBP1.9□□□□□ -2.11
YLR035C-AYLR035C-A RFX1P48743 811 aa1.9□□□□□ -2.11
YLR035C-AYLR035C-A OCA1P50946 238 aaPredicted RBP1.9□□□□□ -2.11
YLR035C-AYLR035C-A SHE4P51534 789 aa1.9□□□□□ -2.11
YLR035C-AYLR035C-A PCL10P53124 433 aa1.9□□□□□ -2.11
YLR035C-AYLR035C-A RCR2Q03446 210 aaKnown RBP1.9□□□□□ -2.11
YLR035C-AYLR035C-A TRS23Q03784 219 aa1.9□□□□□ -2.11
YLR035C-AYLR035C-A TSR1Q07381 788 aaKnown RBP1.9□□□□□ -2.11
YLR035C-AYLR035C-A STE2D6VTK4 431 aa1.89□□□□□ -2.11
YLR035C-AYLR035C-A TRP4P07285 380 aaPredicted RBP1.89□□□□□ -2.11
YLR035C-AYLR035C-A GAL7P08431 366 aa1.89□□□□□ -2.11
YLR035C-AYLR035C-A RPB2P08518 1224 aaKnown RBP1.89□□□□□ -2.11
YLR035C-AYLR035C-A PMI40P29952 429 aaKnown RBP1.89□□□□□ -2.11
YLR035C-AYLR035C-A ATG19P35193 415 aa1.89□□□□□ -2.11
YLR035C-AYLR035C-A MTH1P35198 433 aa1.89□□□□□ -2.11
YLR035C-AYLR035C-A ELF1P36053 145 aa1.89□□□□□ -2.11
YLR035C-AYLR035C-A AGP2P38090 596 aa1.89□□□□□ -2.11
YLR035C-AYLR035C-A RIM4P38741 713 aa1.89□□□□□ -2.11
YLR035C-AYLR035C-A YHR218WP38899 603 aa1.89□□□□□ -2.11
YLR035C-AYLR035C-A YHC3P47040 408 aa1.89□□□□□ -2.11
YLR035C-AYLR035C-A SRB7P47822 140 aa1.89□□□□□ -2.11
YLR035C-AYLR035C-A AMA1P50082 593 aa1.89□□□□□ -2.11
YLR035C-AYLR035C-A RSC1P53236 928 aa1.89□□□□□ -2.11
YLR035C-AYLR035C-A TSR2Q06672 205 aaKnown RBP1.89□□□□□ -2.11
YLR035C-AYLR035C-A SMC6Q12749 1114 aa1.89□□□□□ -2.11
YLR035C-AYLR035C-A RAV1P47104 1357 aa1.89□□□□□ -2.11
YLR035C-AYLR035C-A SPA2P23201 1466 aaKnown RBP1.89□□□□□ -2.11
YLR035C-AYLR035C-A PPR1P07272 904 aaPredicted RBP1.89□□□□□ -2.11
YLR035C-AYLR035C-A FBP1P09201 348 aa1.89□□□□□ -2.11
YLR035C-AYLR035C-A RED1P14291 827 aa1.89□□□□□ -2.11
YLR035C-AYLR035C-A STE11P23561 717 aa1.89□□□□□ -2.11
YLR035C-AYLR035C-A IME2P32581 645 aa1.89□□□□□ -2.11
YLR035C-AYLR035C-A FUI1P38196 639 aa1.89□□□□□ -2.11
YLR035C-AYLR035C-A RXT2P38255 430 aa1.89□□□□□ -2.11
YLR035C-AYLR035C-A UME6P39001 836 aa1.89□□□□□ -2.11
YLR035C-AYLR035C-A UBP12P39538 1254 aa1.89□□□□□ -2.11
YLR035C-AYLR035C-A RAD26P40352 1085 aa1.89□□□□□ -2.11
YLR035C-AYLR035C-A CTR1P49573 406 aa1.89□□□□□ -2.11
YLR035C-AYLR035C-A EFM5P53200 248 aaKnown RBP1.89□□□□□ -2.11
YLR035C-AYLR035C-A PAP2P53632 584 aaKnown RBP1.89□□□□□ -2.11
YLR035C-AYLR035C-A VPS60Q03390 229 aa1.89□□□□□ -2.11
YLR035C-AYLR035C-A TMN2Q04562 672 aa1.89□□□□□ -2.11
YLR035C-AYLR035C-A ECM38Q05902 660 aaPredicted RBP1.89□□□□□ -2.11
YLR035C-AYLR035C-A YLR456WQ06199 204 aa1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms