RNA–Protein interactions for RNA: YLR035C-A

YLR035C-A, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR035C-A, Length 3,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR035C-AYLR035C-A DRS1P32892 752 aaKnown RBP6.22□□□□□ -1.41
YLR035C-AYLR035C-A MTC1P47018 478 aaKnown RBP6.17□□□□□ -1.42
YLR035C-AYLR035C-A FAP1P53971 965 aa5.57□□□□□ -1.52
YLR035C-AYLR035C-A BFR2Q06631 534 aaKnown RBP5.3□□□□□ -1.56
YLR035C-AYLR035C-A DIP2Q12220 943 aaPredicted RBP5.27□□□□□ -1.57
YLR035C-AYLR035C-A PRY3P47033 881 aa5.19□□□□□ -1.58
YLR035C-AYLR035C-A RPG1P38249 964 aaKnown RBP5.11□□□□□ -1.59
YLR035C-AYLR035C-A ISW2Q08773 1120 aa5.04□□□□□ -1.6
YLR035C-AYLR035C-A AAD16Q02895 342 aa5.01□□□□□ -1.61
YLR035C-AYLR035C-A PRI1P10363 409 aa5□□□□□ -1.61
YLR035C-AYLR035C-A AVT3P36062 692 aa5□□□□□ -1.61
YLR035C-AYLR035C-A TSR3Q12094 313 aaKnown RBP5□□□□□ -1.61
YLR035C-AYLR035C-A RSE1Q04693 1361 aaKnown RBP4.96□□□□□ -1.62
YLR035C-AYLR035C-A RPL17AP05740 184 aaKnown RBP4.92□□□□□ -1.62
YLR035C-AYLR035C-A RPL17BP46990 184 aaKnown RBP4.92□□□□□ -1.62
YLR035C-AYLR035C-A REB1P21538 810 aa4.87□□□□□ -1.63
YLR035C-AYLR035C-A YCK3P39962 524 aa4.7□□□□□ -1.66
YLR035C-AYLR035C-A MRPL32P25348 183 aa4.66□□□□□ -1.66
YLR035C-AYLR035C-A DCD1P06773 312 aa4.66□□□□□ -1.66
YLR035C-AYLR035C-A TFA1P36100 482 aa4.62□□□□□ -1.67
YLR035C-AYLR035C-A HOP09932 586 aa4.6□□□□□ -1.67
YLR035C-AYLR035C-A HAA1Q12753 694 aaKnown RBP4.59□□□□□ -1.68
YLR035C-AYLR035C-A YAH1Q12184 172 aaKnown RBP4.55□□□□□ -1.68
YLR035C-AYLR035C-A PTP3P40048 928 aa4.53□□□□□ -1.68
YLR035C-AYLR035C-A CDC27P38042 758 aa4.52□□□□□ -1.69
YLR035C-AYLR035C-A SPT21P35209 758 aa4.51□□□□□ -1.69
YLR035C-AYLR035C-A YKR023WP36119 530 aaKnown RBP4.48□□□□□ -1.69
YLR035C-AYLR035C-A YIL055CP40523 627 aaKnown RBP4.39□□□□□ -1.71
YLR035C-AYLR035C-A OXP1P28273 1286 aa4.38□□□□□ -1.71
YLR035C-AYLR035C-A RIM101P33400 625 aa4.38□□□□□ -1.71
YLR035C-AYLR035C-A TFC8Q12308 588 aa4.37□□□□□ -1.71
YLR035C-AYLR035C-A SCY1P53009 804 aa4.36□□□□□ -1.71
YLR035C-AYLR035C-A MAP2P38174 421 aaKnown RBP4.36□□□□□ -1.71
YLR035C-AYLR035C-A BCH2P36122 765 aa4.31□□□□□ -1.72
YLR035C-AYLR035C-A YGL015CP33199 130 aa4.26□□□□□ -1.73
YLR035C-AYLR035C-A YLR271WQ06152 274 aa4.24□□□□□ -1.73
YLR035C-AYLR035C-A SSP1P38871 571 aa4.22□□□□□ -1.73
YLR035C-AYLR035C-A RSM7P47150 247 aa4.21□□□□□ -1.74
YLR035C-AYLR035C-A EPS1P40557 701 aa4.19□□□□□ -1.74
YLR035C-AYLR035C-A PIB1Q06651 286 aa4.19□□□□□ -1.74
YLR035C-AYLR035C-A AI2P03876 854 aa4.19□□□□□ -1.74
YLR035C-AYLR035C-A CST9Q06032 482 aa4.19□□□□□ -1.74
YLR035C-AYLR035C-A BDF1P35817 686 aa4.17□□□□□ -1.74
YLR035C-AYLR035C-A SLX5P32828 619 aaKnown RBP4.17□□□□□ -1.74
YLR035C-AYLR035C-A MRM1P25270 412 aa4.14□□□□□ -1.75
YLR035C-AYLR035C-A ARP8Q12386 881 aaKnown RBP RIP-Chip data4.13□□□□□ -1.75not detected
YLR035C-AYLR035C-A BBC1P47068 1157 aa4.13□□□□□ -1.75
YLR035C-AYLR035C-A RCR1P38212 213 aa4.1□□□□□ -1.75
YLR035C-AYLR035C-A UBP10P53874 792 aaPredicted RBP4.09□□□□□ -1.75
YLR035C-AYLR035C-A YFR006WP43590 535 aa4.07□□□□□ -1.76
YLR035C-AYLR035C-A PSD2P53037 1138 aaKnown RBP4.02□□□□□ -1.77
YLR035C-AYLR035C-A MGA2P40578 1113 aa4.02□□□□□ -1.77
YLR035C-AYLR035C-A TIF4632P39936 914 aaKnown RBP4.01□□□□□ -1.77
YLR035C-AYLR035C-A WSC3Q12215 556 aa4□□□□□ -1.77
YLR035C-AYLR035C-A DMA1P38823 416 aa3.99□□□□□ -1.77
YLR035C-AYLR035C-A DBP1P24784 617 aaKnown RBP3.94□□□□□ -1.78
YLR035C-AYLR035C-A MIF2P35201 549 aa3.94□□□□□ -1.78
YLR035C-AYLR035C-A YOR238WQ08634 303 aa3.93□□□□□ -1.78
YLR035C-AYLR035C-A STS1P38637 319 aa3.91□□□□□ -1.78
YLR035C-AYLR035C-A YBL029C-AQ3E756 94 aa3.91□□□□□ -1.78
YLR035C-AYLR035C-A GTT3P39996 337 aa3.9□□□□□ -1.78
YLR035C-AYLR035C-A RTG3P38165 486 aa3.9□□□□□ -1.79
YLR035C-AYLR035C-A RAM2P29703 316 aa3.9□□□□□ -1.79
YLR035C-AYLR035C-A VPS29P38759 282 aa3.89□□□□□ -1.79
YLR035C-AYLR035C-A SET4P42948 560 aa3.89□□□□□ -1.79
YLR035C-AYLR035C-A TGL3P40308 642 aa3.86□□□□□ -1.79
YLR035C-AYLR035C-A YAP5P40574 245 aa3.86□□□□□ -1.79
YLR035C-AYLR035C-A YMR1P47147 688 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
YLR035C-AYLR035C-A DCW1P36091 449 aa3.81□□□□□ -1.8
YLR035C-AYLR035C-A EDS1P38073 919 aa3.8□□□□□ -1.8
YLR035C-AYLR035C-A VMA1P17255 1071 aaKnown RBP3.78□□□□□ -1.8
YLR035C-AYLR035C-A COQ8P27697 501 aa3.78□□□□□ -1.8
YLR035C-AYLR035C-A SIS1P25294 352 aaKnown RBP3.78□□□□□ -1.8
YLR035C-AYLR035C-A SPP1Q03012 353 aa3.78□□□□□ -1.81
YLR035C-AYLR035C-A SET1P38827 1080 aaKnown RBP3.76□□□□□ -1.81
YLR035C-AYLR035C-A UBP9P39967 754 aa3.75□□□□□ -1.81
YLR035C-AYLR035C-A VPS70P47161 811 aa3.75□□□□□ -1.81
YLR035C-AYLR035C-A YOL036WQ08206 761 aa3.75□□□□□ -1.81
YLR035C-AYLR035C-A GYP5Q12344 894 aa3.74□□□□□ -1.81
YLR035C-AYLR035C-A BUD31P25337 157 aaPredicted RBP3.73□□□□□ -1.81
YLR035C-AYLR035C-A VNX1P42839 908 aa3.73□□□□□ -1.81
YLR035C-AYLR035C-A ULI1P43604 169 aa3.72□□□□□ -1.81
YLR035C-AYLR035C-A ATH1P48016 1211 aa3.72□□□□□ -1.81
YLR035C-AYLR035C-A MAK11P20484 414 aaKnown RBP3.72□□□□□ -1.81
YLR035C-AYLR035C-A PTC3P34221 468 aaKnown RBP3.72□□□□□ -1.81
YLR035C-AYLR035C-A VHR2P40041 505 aa3.7□□□□□ -1.82
YLR035C-AYLR035C-A GRE2Q12068 342 aaKnown RBP3.7□□□□□ -1.82
YLR035C-AYLR035C-A LDB19Q12502 818 aa3.69□□□□□ -1.82
YLR035C-AYLR035C-A TRP5P00931 707 aaKnown RBP3.68□□□□□ -1.82
YLR035C-AYLR035C-A RQC2Q12532 1038 aaKnown RBP3.67□□□□□ -1.82
YLR035C-AYLR035C-A MID1P41821 548 aa3.66□□□□□ -1.82
YLR035C-AYLR035C-A MST1P07236 462 aa3.65□□□□□ -1.82
YLR035C-AYLR035C-A TIF11P38912 153 aaKnown RBP3.65□□□□□ -1.82
YLR035C-AYLR035C-A SPB4P25808 606 aaPredicted RBP3.65□□□□□ -1.83
YLR035C-AYLR035C-A YEL023CP39992 682 aa3.64□□□□□ -1.83
YLR035C-AYLR035C-A YDR344CQ05510 147 aa3.64□□□□□ -1.83
YLR035C-AYLR035C-A HTA1P04911 132 aaKnown RBP3.63□□□□□ -1.83
YLR035C-AYLR035C-A HTA2P04912 132 aa3.63□□□□□ -1.83
YLR035C-AYLR035C-A SAP30P38429 201 aa3.63□□□□□ -1.83
YLR035C-AYLR035C-A ILV3P39522 585 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms