RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W LSM5P40089 93 aaKnown RBP4.79□□□□□ -1.64
SOF1YLL011W JEM1P40358 645 aa4.79□□□□□ -1.64
SOF1YLL011W FCP1Q03254 732 aa4.79□□□□□ -1.64
SOF1YLL011W TY1A-MR1Q04215 440 aa4.79□□□□□ -1.64
SOF1YLL011W ARG3P05150 338 aa4.78□□□□□ -1.64
SOF1YLL011W AAD3P25612 363 aa4.78□□□□□ -1.64
SOF1YLL011W ESL2P36168 1195 aa4.78□□□□□ -1.64
SOF1YLL011W NPR3P38742 1146 aa4.78□□□□□ -1.64
SOF1YLL011W YLF2P38746 405 aa4.78□□□□□ -1.64
SOF1YLL011W MEP1P40260 492 aa4.78□□□□□ -1.64
SOF1YLL011W PRM2P40534 656 aa4.78□□□□□ -1.64
SOF1YLL011W GPI8P49018 411 aa4.78□□□□□ -1.64
SOF1YLL011W EXG2P52911 562 aa4.78□□□□□ -1.64
SOF1YLL011W BSC5P53755 489 aa4.78□□□□□ -1.64
SOF1YLL011W PCD1Q12524 340 aa4.78□□□□□ -1.64
SOF1YLL011W STH1P32597 1359 aa4.78□□□□□ -1.64
SOF1YLL011W PDR12Q02785 1511 aa4.78□□□□□ -1.64
SOF1YLL011W ERG3P32353 365 aa4.77□□□□□ -1.65
SOF1YLL011W YHR033WP38690 423 aa4.77□□□□□ -1.65
SOF1YLL011W YHL012WP38709 493 aa4.77□□□□□ -1.65
SOF1YLL011W ARF3P40994 183 aaRIP-Chip data4.77□□□□□ -1.65not detected
SOF1YLL011W SSY5P47002 699 aa4.77□□□□□ -1.65
SOF1YLL011W PSP1P50896 841 aaKnown RBP4.77□□□□□ -1.65
SOF1YLL011W SSL2Q00578 843 aa4.77□□□□□ -1.65
SOF1YLL011W ACS1Q01574 713 aa4.77□□□□□ -1.65
SOF1YLL011W ASM4Q05166 528 aa4.77□□□□□ -1.65
SOF1YLL011W ISA1Q07821 250 aaPredicted RBP4.77□□□□□ -1.65
SOF1YLL011W ZRT2Q12436 422 aa4.77□□□□□ -1.65
SOF1YLL011W SKM1Q12469 655 aa4.77□□□□□ -1.65
SOF1YLL011W ATG11Q12527 1178 aa4.77□□□□□ -1.65
SOF1YLL011W IQG1Q12280 1495 aa4.77□□□□□ -1.65
SOF1YLL011W SES1P07284 462 aaKnown RBP4.76□□□□□ -1.65
SOF1YLL011W SAM35P14693 329 aa4.76□□□□□ -1.65
SOF1YLL011W FRD1P32614 470 aaKnown RBP4.76□□□□□ -1.65
SOF1YLL011W MAC1P35192 417 aa4.76□□□□□ -1.65
SOF1YLL011W YEL025CP39991 1188 aa4.76□□□□□ -1.65
SOF1YLL011W MTR3P48240 250 aaPredicted RBP4.76□□□□□ -1.65
SOF1YLL011W DUO1P53168 247 aaKnown RBP4.76□□□□□ -1.65
SOF1YLL011W CWC22P53333 577 aaKnown RBP4.76□□□□□ -1.65
SOF1YLL011W ORC4P54791 529 aa4.76□□□□□ -1.65
SOF1YLL011W RPT6Q01939 405 aaKnown RBP4.76□□□□□ -1.65
SOF1YLL011W RCR2Q03446 210 aaKnown RBP4.76□□□□□ -1.65
SOF1YLL011W AAD4Q07747 329 aa4.76□□□□□ -1.65
SOF1YLL011W PGC1Q08959 321 aa4.76□□□□□ -1.65
SOF1YLL011W HOS1Q12214 470 aa4.76□□□□□ -1.65
SOF1YLL011W DOP1Q03921 1698 aa4.76□□□□□ -1.65
SOF1YLL011W GPM1P00950 247 aaKnown RBP4.75□□□□□ -1.65
SOF1YLL011W GCN4P03069 281 aa4.75□□□□□ -1.65
SOF1YLL011W URA3P03962 267 aa4.75□□□□□ -1.65
SOF1YLL011W TPK1P06244 397 aa4.75□□□□□ -1.65
SOF1YLL011W ILS1P09436 1072 aaKnown RBP4.75□□□□□ -1.65
SOF1YLL011W PCK1P10963 549 aa4.75□□□□□ -1.65
SOF1YLL011W ROX1P25042 368 aa4.75□□□□□ -1.65
SOF1YLL011W TRK2P28584 889 aa4.75□□□□□ -1.65
SOF1YLL011W SAC6P32599 642 aaKnown RBP4.75□□□□□ -1.65
SOF1YLL011W YKL100CP34248 587 aa4.75□□□□□ -1.65
SOF1YLL011W YJR061WP40355 935 aa4.75□□□□□ -1.65
SOF1YLL011W UBP7P40453 1071 aa4.75□□□□□ -1.65
SOF1YLL011W FOL2P51601 243 aaKnown RBP4.75□□□□□ -1.65
SOF1YLL011W CTF4Q01454 927 aa4.75□□□□□ -1.65
SOF1YLL011W TRI1Q05024 226 aa4.75□□□□□ -1.65
SOF1YLL011W COX17Q12287 69 aa4.75□□□□□ -1.65
SOF1YLL011W SFI1Q12369 946 aa4.75□□□□□ -1.65
SOF1YLL011W PDR10P51533 1564 aa4.75□□□□□ -1.65
SOF1YLL011W IME1P21190 360 aa4.75□□□□□ -1.65
SOF1YLL011W ARP2P32381 391 aaKnown RBP4.75□□□□□ -1.65
SOF1YLL011W POP2P39008 433 aa4.75□□□□□ -1.65
SOF1YLL011W LTP1P40347 161 aa4.75□□□□□ -1.65
SOF1YLL011W TAF4P50105 388 aa4.75□□□□□ -1.65
SOF1YLL011W HOS2P53096 452 aaPredicted RBP4.75□□□□□ -1.65
SOF1YLL011W YNR061CP53747 219 aa4.75□□□□□ -1.65
SOF1YLL011W SQS1P53866 767 aaKnown RBP4.75□□□□□ -1.65
SOF1YLL011W HUA2Q12134 243 aa4.75□□□□□ -1.65
SOF1YLL011W ISA2Q12425 185 aa4.75□□□□□ -1.65
SOF1YLL011W RTN2Q12443 393 aa4.75□□□□□ -1.65
SOF1YLL011W NHA1Q99271 985 aa4.75□□□□□ -1.65
SOF1YLL011W GDB1Q06625 1536 aa4.74□□□□□ -1.65
SOF1YLL011W SUI3P09064 285 aaKnown RBP4.74□□□□□ -1.65
SOF1YLL011W PMS1P14242 873 aa4.74□□□□□ -1.65
SOF1YLL011W ARG1P22768 420 aa4.74□□□□□ -1.65
SOF1YLL011W SRO9P25567 434 aaKnown RBP4.74□□□□□ -1.65
SOF1YLL011W CWH43P25618 953 aa4.74□□□□□ -1.65
SOF1YLL011W RRM3P38766 723 aa4.74□□□□□ -1.65
SOF1YLL011W SAK1P38990 1142 aa4.74□□□□□ -1.65
SOF1YLL011W CAB2P40506 365 aa4.74□□□□□ -1.65
SOF1YLL011W BUD8P41698 603 aa4.74□□□□□ -1.65
SOF1YLL011W SIP4P46954 829 aa4.74□□□□□ -1.65
SOF1YLL011W IMA1P53051 589 aa4.74□□□□□ -1.65
SOF1YLL011W PEF1P53238 335 aa4.74□□□□□ -1.65
SOF1YLL011W VPS75P53853 264 aa4.74□□□□□ -1.65
SOF1YLL011W ZDS2P54786 942 aa4.74□□□□□ -1.65
SOF1YLL011W YSA1Q01976 231 aa4.74□□□□□ -1.65
SOF1YLL011W RMT2Q03305 412 aa4.74□□□□□ -1.65
SOF1YLL011W YDR131CQ03899 556 aa4.74□□□□□ -1.65
SOF1YLL011W CDA1Q06702 301 aa4.74□□□□□ -1.65
SOF1YLL011W RLP24Q07915 199 aaKnown RBP4.74□□□□□ -1.65
SOF1YLL011W CIR2Q08822 631 aa4.74□□□□□ -1.65
SOF1YLL011W TY1A-NL1Q12391 440 aaKnown RBP4.74□□□□□ -1.65
SOF1YLL011W YOR111WQ99210 232 aa4.74□□□□□ -1.65
SOF1YLL011W NUP157P40064 1391 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms