RNA–Protein interactions for RNA: YER120W

SCS2, Transcript of Integral ER membrane protein, regulates phospholipid metabolism, yeast

Gene SCS2, Length 735 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCS2	YER120W	IRC10	Q08118	586 aa		5.2	□□□□□ -1.58
SCS2	YER120W	SGO1	Q08490	590 aa		5.2	□□□□□ -1.58
SCS2	YER120W	YOR022C	Q12204	715 aa		5.2	□□□□□ -1.58
SCS2	YER120W	MNL2	Q12205	849 aa		5.2	□□□□□ -1.58
SCS2	YER120W	YLR422W	Q06409	1932 aa		5.2	□□□□□ -1.58
SCS2	YER120W	TEF1	P02994	458 aa	Known RBP	5.19	□□□□□ -1.58
SCS2	YER120W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
SCS2	YER120W	CDC6	P09119	513 aa		5.19	□□□□□ -1.58
SCS2	YER120W	CBP3	P21560	335 aa		5.19	□□□□□ -1.58
SCS2	YER120W	VPS1	P21576	704 aa	Known RBP	5.19	□□□□□ -1.58
SCS2	YER120W	RSA4	P25382	515 aa	Known RBP	5.19	□□□□□ -1.58
SCS2	YER120W	PAP1	P29468	568 aa	Known RBP	5.19	□□□□□ -1.58
SCS2	YER120W	ITR1	P30605	584 aa		5.19	□□□□□ -1.58
SCS2	YER120W	DPH2	P32461	534 aa		5.19	□□□□□ -1.58
SCS2	YER120W	NUP120	P35729	1037 aa		5.19	□□□□□ -1.58
SCS2	YER120W	CTM1	P38818	585 aa		5.19	□□□□□ -1.58
SCS2	YER120W	SMC2	P38989	1170 aa	Known RBP	5.19	□□□□□ -1.58
SCS2	YER120W	ECM1	P39715	212 aa		5.19	□□□□□ -1.58
SCS2	YER120W	VAC8	P39968	578 aa		5.19	□□□□□ -1.58
SCS2	YER120W	RPN3	P40016	523 aa	Known RBP	5.19	□□□□□ -1.58
SCS2	YER120W	NDE1	P40215	560 aa		5.19	□□□□□ -1.58
SCS2	YER120W	YIL166C	P40445	542 aa		5.19	□□□□□ -1.58
SCS2	YER120W	ULP2	P40537	1034 aa	Predicted RBP	5.19	□□□□□ -1.58
SCS2	YER120W	MAF1	P41910	395 aa		5.19	□□□□□ -1.58
SCS2	YER120W	MET12	P46151	657 aa		5.19	□□□□□ -1.58
SCS2	YER120W	SAE2	P46946	345 aa		5.19	□□□□□ -1.58
SCS2	YER120W	IML2	P47031	731 aa		5.19	□□□□□ -1.58
SCS2	YER120W	GIM3	P53900	129 aa		5.19	□□□□□ -1.58
SCS2	YER120W	GAD1	Q04792	585 aa		5.19	□□□□□ -1.58
SCS2	YER120W	HCR1	Q05775	265 aa	Known RBP	5.19	□□□□□ -1.58
SCS2	YER120W	ESC8	Q08119	714 aa		5.19	□□□□□ -1.58
SCS2	YER120W	BRX1	Q08235	291 aa	Known RBP	5.19	□□□□□ -1.58
SCS2	YER120W	OSW2	Q12202	724 aa		5.19	□□□□□ -1.58
SCS2	YER120W	PKH2	Q12236	1081 aa	Known RBP	5.19	□□□□□ -1.58
SCS2	YER120W	TAF3	Q12297	353 aa		5.19	□□□□□ -1.58
SCS2	YER120W	WHI5	Q12416	295 aa		5.19	□□□□□ -1.58
SCS2	YER120W	RRD2	Q12461	358 aa		5.19	□□□□□ -1.58
SCS2	YER120W	SMC6	Q12749	1114 aa		5.19	□□□□□ -1.58
SCS2	YER120W	TMA7	Q3E764	64 aa	Known RBP	5.19	□□□□□ -1.58
SCS2	YER120W	ADE4	P04046	510 aa	Known RBP	5.18	□□□□□ -1.58
SCS2	YER120W	ADE8	P04161	214 aa		5.18	□□□□□ -1.58
SCS2	YER120W	RPC40	P07703	335 aa	Known RBP	5.18	□□□□□ -1.58
SCS2	YER120W	TRL1	P09880	827 aa	Known RBP	5.18	□□□□□ -1.58
SCS2	YER120W	TCP1	P12612	559 aa	Known RBP	5.18	□□□□□ -1.58
SCS2	YER120W	APE1	P14904	514 aa		5.18	□□□□□ -1.58
SCS2	YER120W	GLK1	P17709	500 aa	Known RBP	5.18	□□□□□ -1.58
SCS2	YER120W	RPC31	P17890	251 aa		5.18	□□□□□ -1.58
SCS2	YER120W	GLN3	P18494	730 aa		5.18	□□□□□ -1.58
SCS2	YER120W	PMA2	P19657	947 aa		5.18	□□□□□ -1.58
SCS2	YER120W	REC107	P21651	314 aa		5.18	□□□□□ -1.58
SCS2	YER120W	VMA8	P32610	256 aa	Known RBP	5.18	□□□□□ -1.58
SCS2	YER120W	COT1	P32798	439 aa		5.18	□□□□□ -1.58
SCS2	YER120W	CNS1	P33313	385 aa		5.18	□□□□□ -1.58
SCS2	YER120W	SWH1	P35845	1188 aa		5.18	□□□□□ -1.58
SCS2	YER120W	SET3	P36124	751 aa		5.18	□□□□□ -1.58
SCS2	YER120W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
SCS2	YER120W	MRX3	P38172	270 aa		5.18	□□□□□ -1.58
SCS2	YER120W	SAF1	P38352	637 aa		5.18	□□□□□ -1.58
SCS2	YER120W	PEX28	P38848	579 aa		5.18	□□□□□ -1.58
SCS2	YER120W	STN1	P38960	494 aa		5.18	□□□□□ -1.58
SCS2	YER120W	BOL3	P39724	118 aa		5.18	□□□□□ -1.58
SCS2	YER120W	TMN3	P40071	706 aa		5.18	□□□□□ -1.58
SCS2	YER120W	YRB1	P41920	201 aa	Known RBP	5.18	□□□□□ -1.58
SCS2	YER120W	RTT102	P53330	157 aa		5.18	□□□□□ -1.58
SCS2	YER120W	BIO5	P53744	561 aa	Known RBP	5.18	□□□□□ -1.58
SCS2	YER120W	PGA2	P53903	129 aa		5.18	□□□□□ -1.58
SCS2	YER120W	YLR407W	Q06070	228 aa		5.18	□□□□□ -1.58
SCS2	YER120W	PEX19	Q07418	342 aa		5.18	□□□□□ -1.58
SCS2	YER120W	IES4	Q08561	116 aa		5.18	□□□□□ -1.58
SCS2	YER120W	RKM1	Q08961	583 aa	Predicted RBP	5.18	□□□□□ -1.58
SCS2	YER120W	RTC5	Q12108	567 aa	Known RBP	5.18	□□□□□ -1.58
SCS2	YER120W	TIP41	Q12199	356 aa		5.18	□□□□□ -1.58
SCS2	YER120W	GCD1	P09032	578 aa	Predicted RBP	5.17	□□□□□ -1.58
SCS2	YER120W	FRS2	P15625	503 aa	Known RBP	5.17	□□□□□ -1.58
SCS2	YER120W	ATE1	P16639	503 aa		5.17	□□□□□ -1.58
SCS2	YER120W	DBP5	P20449	482 aa	Known RBP	5.17	□□□□□ -1.58
SCS2	YER120W	PEX1	P24004	1043 aa		5.17	□□□□□ -1.58
SCS2	YER120W	MSH2	P25847	964 aa		5.17	□□□□□ -1.58
SCS2	YER120W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.17	□□□□□ -1.58	not detected
SCS2	YER120W	PEX2	P32800	271 aa		5.17	□□□□□ -1.58
SCS2	YER120W	RPT1	P33299	467 aa	Known RBP	5.17	□□□□□ -1.58
SCS2	YER120W	MRP8	P35719	219 aa		5.17	□□□□□ -1.58
SCS2	YER120W	PSY4	P38193	441 aa		5.17	□□□□□ -1.58
SCS2	YER120W	YSW1	P38280	609 aa		5.17	□□□□□ -1.58
SCS2	YER120W	SIT1	P39980	628 aa		5.17	□□□□□ -1.58
SCS2	YER120W	TOK1	P40310	691 aa		5.17	□□□□□ -1.58
SCS2	YER120W	YTA12	P40341	825 aa		5.17	□□□□□ -1.58
SCS2	YER120W	MPH1	P40562	993 aa		5.17	□□□□□ -1.58
SCS2	YER120W	AVT1	P47082	602 aa		5.17	□□□□□ -1.58
SCS2	YER120W	SKP1	P52286	194 aa		5.17	□□□□□ -1.58
SCS2	YER120W	MNP1	P53163	194 aa	Predicted RBP	5.17	□□□□□ -1.58
SCS2	YER120W	YNL146W	P53906	100 aa		5.17	□□□□□ -1.58
SCS2	YER120W	NCS2	P53923	493 aa	Predicted RBP	5.17	□□□□□ -1.58
SCS2	YER120W	RNT1	Q02555	471 aa		5.17	□□□□□ -1.58
SCS2	YER120W	RRN5	Q02983	363 aa		5.17	□□□□□ -1.58
SCS2	YER120W	RRP17	Q04031	235 aa	Predicted RBP	5.17	□□□□□ -1.58
SCS2	YER120W	APC11	Q12157	165 aa		5.17	□□□□□ -1.58
SCS2	YER120W	SLP1	Q12232	587 aa		5.17	□□□□□ -1.58
SCS2	YER120W	CCH1	P50077	2039 aa		5.17	□□□□□ -1.58
SCS2	YER120W	FMP27	Q06179	2628 aa		5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms