RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W NNF2P53253 936 aa2.4□□□□□ -2.03
NUP170YBL079W ORC3P54790 616 aa2.4□□□□□ -2.03
NUP170YBL079W YMR178WQ03219 274 aaKnown RBP2.4□□□□□ -2.03
NUP170YBL079W YHM2Q04013 314 aa2.4□□□□□ -2.03
NUP170YBL079W EIS1Q05050 843 aaKnown RBP2.4□□□□□ -2.03
NUP170YBL079W DIC1Q06143 298 aa2.4□□□□□ -2.03
NUP170YBL079W LDB18Q07887 179 aa2.4□□□□□ -2.03
NUP170YBL079W CHO2P05374 869 aaKnown RBP2.4□□□□□ -2.03
NUP170YBL079W ABF1P14164 731 aa2.4□□□□□ -2.03
NUP170YBL079W PPH22P23595 377 aa2.4□□□□□ -2.03
NUP170YBL079W MRPL15P36523 253 aa2.4□□□□□ -2.03
NUP170YBL079W ECM2P38241 364 aaKnown RBP2.4□□□□□ -2.03
NUP170YBL079W YBR071WP38243 211 aa2.4□□□□□ -2.03
NUP170YBL079W REI1P38344 393 aaPredicted RBP2.4□□□□□ -2.03
NUP170YBL079W NDT80P38830 627 aa2.4□□□□□ -2.03
NUP170YBL079W YNL058CP53947 316 aa2.4□□□□□ -2.03
NUP170YBL079W NPL3Q01560 414 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
NUP170YBL079W RSF1Q05043 376 aa2.4□□□□□ -2.03
NUP170YBL079W THI20Q08224 551 aa2.4□□□□□ -2.03
NUP170YBL079W HIS1P00498 297 aaKnown RBP2.4□□□□□ -2.03
NUP170YBL079W TPK1P06244 397 aa2.4□□□□□ -2.03
NUP170YBL079W KAR1P11927 433 aa2.4□□□□□ -2.03
NUP170YBL079W PUT4P15380 627 aa2.4□□□□□ -2.03
NUP170YBL079W APA1P16550 321 aaKnown RBP2.4□□□□□ -2.03
NUP170YBL079W PRI2P20457 528 aa2.4□□□□□ -2.03
NUP170YBL079W TFC3P34111 1160 aa2.4□□□□□ -2.03
NUP170YBL079W ALG3P38179 458 aa2.4□□□□□ -2.03
NUP170YBL079W PCM1P38628 557 aaKnown RBP2.4□□□□□ -2.03
NUP170YBL079W YHR045WP38775 560 aa2.4□□□□□ -2.03
NUP170YBL079W SMF1P38925 575 aa2.4□□□□□ -2.03
NUP170YBL079W BEM4P39011 633 aa2.4□□□□□ -2.03
NUP170YBL079W ERV46P39727 415 aa2.4□□□□□ -2.03
NUP170YBL079W IST3P40565 148 aaPredicted RBP2.4□□□□□ -2.03
NUP170YBL079W SWC4P53201 476 aa2.4□□□□□ -2.03
NUP170YBL079W EEB1Q02891 456 aa2.4□□□□□ -2.03
NUP170YBL079W YDR109CQ04585 715 aa2.4□□□□□ -2.03
NUP170YBL079W YOR338WQ99326 363 aa2.4□□□□□ -2.03
NUP170YBL079W BEM1P29366 551 aa2.39□□□□□ -2.03
NUP170YBL079W PRS1P32895 427 aaKnown RBP2.39□□□□□ -2.03
NUP170YBL079W YEL1P34225 687 aa2.39□□□□□ -2.03
NUP170YBL079W TDA3P38758 523 aa2.39□□□□□ -2.03
NUP170YBL079W SEC24P40482 926 aaKnown RBP2.39□□□□□ -2.03
NUP170YBL079W YPR003CP53394 754 aa2.39□□□□□ -2.03
NUP170YBL079W ZRG17P53735 605 aa2.39□□□□□ -2.03
NUP170YBL079W ALF1P53904 254 aa2.39□□□□□ -2.03
NUP170YBL079W PNG1Q02890 363 aa2.39□□□□□ -2.03
NUP170YBL079W ENT5Q03769 411 aaKnown RBP2.39□□□□□ -2.03
NUP170YBL079W GFD1Q04839 188 aaKnown RBP2.39□□□□□ -2.03
NUP170YBL079W VTA1Q06263 330 aa2.39□□□□□ -2.03
NUP170YBL079W MDM38Q08179 573 aa2.39□□□□□ -2.03
NUP170YBL079W SRO7Q12038 1033 aa2.39□□□□□ -2.03
NUP170YBL079W REX3Q12090 404 aa2.39□□□□□ -2.03
NUP170YBL079W TSR3Q12094 313 aaKnown RBP2.39□□□□□ -2.03
NUP170YBL079W COX6P00427 148 aa2.39□□□□□ -2.03
NUP170YBL079W RPL17AP05740 184 aaKnown RBP2.39□□□□□ -2.03
NUP170YBL079W SST2P11972 698 aaKnown RBP2.39□□□□□ -2.03
NUP170YBL079W SUP45P12385 437 aaKnown RBP2.39□□□□□ -2.03
NUP170YBL079W STI1P15705 589 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
NUP170YBL079W PRR1P28708 518 aa2.39□□□□□ -2.03
NUP170YBL079W PLC1P32383 869 aa2.39□□□□□ -2.03
NUP170YBL079W TOM20P35180 183 aa2.39□□□□□ -2.03
NUP170YBL079W CTF13P35203 478 aa2.39□□□□□ -2.03
NUP170YBL079W RRP3P38712 501 aaKnown RBP2.39□□□□□ -2.03
NUP170YBL079W RPL17BP46990 184 aaKnown RBP2.39□□□□□ -2.03
NUP170YBL079W RAD17P48581 401 aa2.39□□□□□ -2.03
NUP170YBL079W GUP1P53154 560 aa2.39□□□□□ -2.03
NUP170YBL079W MUB1Q03162 620 aa2.39□□□□□ -2.03
NUP170YBL079W FMP45Q07651 309 aa2.39□□□□□ -2.03
NUP170YBL079W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
NUP170YBL079W CUP1-1P0CX80 61 aa2.39□□□□□ -2.03
NUP170YBL079W CUP1-2P0CX81 61 aa2.39□□□□□ -2.03
NUP170YBL079W DAL82P21705 255 aa2.39□□□□□ -2.03
NUP170YBL079W CAD1P24813 409 aaKnown RBP2.39□□□□□ -2.03
NUP170YBL079W SPS22P25380 463 aa2.39□□□□□ -2.03
NUP170YBL079W RAD5P32849 1169 aaPredicted RBP2.39□□□□□ -2.03
NUP170YBL079W PPS1P38148 807 aa2.39□□□□□ -2.03
NUP170YBL079W FHL1P39521 936 aa2.39□□□□□ -2.03
NUP170YBL079W SBE2P42223 864 aaKnown RBP2.39□□□□□ -2.03
NUP170YBL079W YJR124CP47159 448 aa2.39□□□□□ -2.03
NUP170YBL079W HLJ1P48353 224 aa2.39□□□□□ -2.03
NUP170YBL079W RLI1Q03195 608 aaKnown RBP2.39□□□□□ -2.03
NUP170YBL079W TAF9Q05027 157 aa2.39□□□□□ -2.03
NUP170YBL079W BSP1Q06604 576 aa2.39□□□□□ -2.03
NUP170YBL079W ARP7Q12406 477 aa2.39□□□□□ -2.03
NUP170YBL079W AI3P03877 415 aa2.38□□□□□ -2.03
NUP170YBL079W YJU2P28320 278 aaPredicted RBP2.38□□□□□ -2.03
NUP170YBL079W ABD1P32783 436 aaPredicted RBP2.38□□□□□ -2.03
NUP170YBL079W PRX1P34227 261 aaKnown RBP2.38□□□□□ -2.03
NUP170YBL079W RFC5P38251 354 aa2.38□□□□□ -2.03
NUP170YBL079W IFA38P38286 347 aa2.38□□□□□ -2.03
NUP170YBL079W PIH1P38768 344 aa2.38□□□□□ -2.03
NUP170YBL079W PFD1P46988 109 aa2.38□□□□□ -2.03
NUP170YBL079W SAP4P53036 818 aa2.38□□□□□ -2.03
NUP170YBL079W TPO2P53283 614 aa2.38□□□□□ -2.03
NUP170YBL079W TEP1P53916 434 aa2.38□□□□□ -2.03
NUP170YBL079W NUT2Q06213 157 aa2.38□□□□□ -2.03
NUP170YBL079W TRE1Q08919 783 aa2.38□□□□□ -2.03
NUP170YBL079W ENO1P00924 437 aaKnown RBP2.38□□□□□ -2.03
NUP170YBL079W SCL1P21243 252 aaKnown RBP2.38□□□□□ -2.03
NUP170YBL079W VBA3P25594 458 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms