RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	YNR031C	YKL050C	P35736	922 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	UBS1	P38290	277 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	ERC1	P38767	581 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	TAT2	P38967	592 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	YTA6	P40328	754 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	GYP8	P43570	497 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	VTC2	P43585	828 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	SUM1	P46676	1062 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	PSP2	P50109	593 aa	Known RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	YGL140C	P53120	1219 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	MON1	P53129	644 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	YGR012W	P53206	393 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	SRT1	Q03175	343 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	YML083C	Q04526	418 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	SSQ1	Q05931	657 aa	Predicted RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	SPP382	Q06411	708 aa	Predicted RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	SMC5	Q08204	1093 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	MSC6	Q08818	692 aa	Known RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	YPL260W	Q08977	551 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	YDL206W	Q12424	762 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	MTF2	P10849	440 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	TRX2	P22803	104 aa	Known RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	APN1	P22936	367 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	TFB1	P32776	642 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	VAM7	P32912	316 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	SLA2	P33338	968 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	SLD2	P34252	453 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	VPS24	P36095	224 aa	Known RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	SIP3	P38717	1229 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	PET100	P38958	111 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	1.58	□□□□□ -2.16	RIP-Chip
SSK2	YNR031C	IML2	P47031	731 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	ISM1	P48526	1002 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	MRPS35	P53292	345 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	MAL13	P53338	473 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	YNL134C	P53912	376 aa	Known RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	NAM8	Q00539	523 aa	Known RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	LEE1	Q02799	301 aa	Known RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	RSM28	Q03430	361 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	TRS130	Q03660	1102 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	VMS1	Q04311	632 aa	Known RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	MYO5	Q04439	1219 aa	Known RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	PUS1	Q12211	544 aa	Known RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	MATALPHA2	P0CY08	210 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	HMLALPHA2	P0CY09	210 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	SSB1	P11484	613 aa	Known RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	SPT15	P13393	240 aa	Known RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	POX1	P13711	748 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	RSR1	P13856	272 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	PRP2	P20095	876 aa	Predicted RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	CMK1	P27466	446 aa	Known RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	URA1	P28272	314 aa	Predicted RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	DPH5	P32469	300 aa	Predicted RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	SRP40	P32583	406 aa	Predicted RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	UGA4	P32837	571 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	YBL028C	P38202	106 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	REI1	P38344	393 aa	Predicted RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	TIF5	P38431	405 aa	Known RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	RTS1	P38903	757 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	SSB2	P40150	613 aa	Known RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	YRB1	P41920	201 aa	Known RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	NOP9	P47077	666 aa	Known RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	GCV1	P48015	400 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	TGL2	P54857	326 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	PRO2	P54885	456 aa	Known RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	UBP2	Q01476	1272 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	FDC1	Q03034	503 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	IRC4	Q03036	179 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	MUB1	Q03162	620 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	YMR265C	Q03508	461 aa	Known RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	YMR111C	Q04461	462 aa	Predicted RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	RTT103	Q05543	409 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	HRQ1	Q05549	1077 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	HRK1	Q08732	759 aa	Known RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	YOR378W	Q08902	515 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	RIM20	Q12033	661 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	MPD2	Q99316	277 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	RED1	P14291	827 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	HNM1	P19807	563 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	CLN2	P20438	545 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	MIH1	P23748	554 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	NPP1	P25353	742 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	ZUO1	P32527	433 aa	Known RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	YEL043W	P32618	956 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	PTR2	P32901	601 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	BLI1	P35727	113 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	OLA1	P38219	394 aa	Known RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	CST26	P38226	397 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	HSM3	P38348	480 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	APE4	P38821	490 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	SMC2	P38989	1170 aa	Known RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	EDC3	P39998	551 aa	Known RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	YIR042C	P40586	236 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	CIR1	P42940	261 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	YGR273C	P53329	174 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	MOT3	P54785	490 aa	Known RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	CUS1	Q02554	436 aa	Predicted RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	HAS1	Q03532	505 aa	Known RBP	1.58	□□□□□ -2.16
SSK2	YNR031C	ATG23	Q06671	453 aa		1.58	□□□□□ -2.16
SSK2	YNR031C	YLR413W	Q06689	675 aa		1.58	□□□□□ -2.16

Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms