RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	CBF1	P17106	351 aa		4.15	□□□□□ -1.75
ATG2	YNL242W	THR1	P17423	357 aa	Known RBP	4.15	□□□□□ -1.75
ATG2	YNL242W	PFF1	P38244	976 aa		4.15	□□□□□ -1.75
ATG2	YNL242W	YBR138C	P38277	524 aa		4.15	□□□□□ -1.75
ATG2	YNL242W	YHR020W	P38708	688 aa	Known RBP	4.15	□□□□□ -1.75
ATG2	YNL242W	SPC72	P39723	622 aa		4.15	□□□□□ -1.75
ATG2	YNL242W	GPD2	P41911	440 aa	Known RBP	4.15	□□□□□ -1.75
ATG2	YNL242W	STB2	P46679	850 aa		4.15	□□□□□ -1.75
ATG2	YNL242W	TIM54	P47045	478 aa		4.15	□□□□□ -1.75
ATG2	YNL242W	SEC10	Q06245	871 aa		4.15	□□□□□ -1.75
ATG2	YNL242W	YLR053C	Q12026	108 aa		4.15	□□□□□ -1.75
ATG2	YNL242W	YOR131C	Q12486	218 aa		4.15	□□□□□ -1.75
ATG2	YNL242W	SEC6	P32844	805 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	IRR1	P40541	1150 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	YGL176C	P46945	554 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	FPK1	P53739	893 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	KAR5	Q04746	504 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	YDR278C	Q05612	105 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	MCP2	Q06567	569 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	NYV1	Q12255	253 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	RPL8B	P29453	256 aa	Known RBP	4.14	□□□□□ -1.75
ATG2	YNL242W	RPN3	P40016	523 aa	Known RBP	4.14	□□□□□ -1.75
ATG2	YNL242W	DAK2	P43550	591 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	GNP1	P48813	663 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	PSP2	P50109	593 aa	Known RBP	4.14	□□□□□ -1.75
ATG2	YNL242W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
ATG2	YNL242W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
ATG2	YNL242W	YIG1	Q08956	461 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	KEL3	Q08979	651 aa	Predicted RBP	4.14	□□□□□ -1.75
ATG2	YNL242W	RRD2	Q12461	358 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	HIS3	P06633	220 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	ERG12	P07277	443 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	ARG8	P18544	423 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	RGR1	P19263	1082 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	RET1	P22276	1149 aa	Known RBP	4.14	□□□□□ -1.75
ATG2	YNL242W	UBA1	P22515	1024 aa	Known RBP	4.14	□□□□□ -1.75
ATG2	YNL242W	CNA1	P23287	553 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
ATG2	YNL242W	YJU2	P28320	278 aa	Predicted RBP	4.14	□□□□□ -1.75
ATG2	YNL242W	SMI1	P32566	505 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	TPO5	P36029	618 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	YKR015C	P36111	568 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	PDX3	P38075	228 aa	Known RBP	4.14	□□□□□ -1.75
ATG2	YNL242W	GUP1	P53154	560 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	YMR187C	Q03236	431 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	AIM33	Q04516	312 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	THI3	Q07471	609 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	SUB2	Q07478	446 aa	Known RBP	4.14	□□□□□ -1.75
ATG2	YNL242W	RSF2	P46974	1380 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	ADE3	P07245	946 aa	Known RBP	4.14	□□□□□ -1.75
ATG2	YNL242W	SSC1	P0CS90	654 aa	Known RBP	4.14	□□□□□ -1.75
ATG2	YNL242W	SRL3	P36167	246 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	SHU2	P38957	223 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	SIP5	P40210	489 aa	Known RBP	4.14	□□□□□ -1.75
ATG2	YNL242W	DAN4	P47179	1161 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	YGR273C	P53329	174 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	MSC6	Q08818	692 aa	Known RBP	4.14	□□□□□ -1.75
ATG2	YNL242W	YPR202W	Q08993	238 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	HTZ1	Q12692	134 aa	Known RBP	4.14	□□□□□ -1.75
ATG2	YNL242W	YBL113C	Q7M4S9	792 aa		4.14	□□□□□ -1.75
ATG2	YNL242W	CAD1	P24813	409 aa	Known RBP	4.13	□□□□□ -1.75
ATG2	YNL242W	DBF4	P32325	704 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	OCT1	P35999	772 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	VPS21	P36017	210 aa	Known RBP	4.13	□□□□□ -1.75
ATG2	YNL242W	TBS1	P38114	1094 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	EXO5	P38289	585 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	PTP3	P40048	928 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	MKT1	P40850	830 aa	Known RBP	4.13	□□□□□ -1.75
ATG2	YNL242W	SWP82	P43554	623 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	MIP1	P15801	1254 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	URA4	P20051	364 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	SBA1	P28707	216 aa	Known RBP	4.13	□□□□□ -1.75
ATG2	YNL242W	MRF1	P30775	413 aa	Predicted RBP	4.13	□□□□□ -1.75
ATG2	YNL242W	MEI5	P32489	222 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	RTG2	P32608	588 aa	Known RBP	4.13	□□□□□ -1.75
ATG2	YNL242W	DBP7	P36120	742 aa	Known RBP	4.13	□□□□□ -1.75
ATG2	YNL242W	DIA4	P38705	446 aa	Predicted RBP	4.13	□□□□□ -1.75
ATG2	YNL242W	YEL023C	P39992	682 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	LAM5	P43560	674 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	MRM2	P53123	320 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	CWC25	P53854	179 aa	Known RBP	4.13	□□□□□ -1.75
ATG2	YNL242W	PEX29	Q03370	554 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	RSM24	Q03976	319 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	TDA9	Q04545	1251 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	UIP4	Q08926	304 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	TRP2	P00899	507 aa	Known RBP	4.13	□□□□□ -1.75
ATG2	YNL242W	TFB1	P32776	642 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	NCL1	P38205	684 aa	Known RBP	4.13	□□□□□ -1.75
ATG2	YNL242W	ALA1	P40825	983 aa	Known RBP	4.13	□□□□□ -1.75
ATG2	YNL242W	CIT3	P43635	486 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	SRB7	P47822	140 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	HEH2	Q03281	663 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	YMR027W	Q04371	470 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	YDL124W	Q07551	312 aa	Known RBP	4.13	□□□□□ -1.75
ATG2	YNL242W	PHM7	Q12252	991 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	STB3	Q12427	513 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	VCX1	Q99385	411 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	TIF1	P10081	395 aa	Known RBP	4.13	□□□□□ -1.75
ATG2	YNL242W	MSH2	P25847	964 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	PRO3	P32263	286 aa	Known RBP	4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms