RNA–Protein interactions for RNA: YDL149W

ATG9, Transcript of Transmembrane protein involved in forming Cvt and autophagic vesicles, yeastyeast

Gene ATG9, Length 2,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG9YDL149W TPK1P06244 397 aa2.06□□□□□ -2.08
ATG9YDL149W MSN1P22148 382 aa2.06□□□□□ -2.08
ATG9YDL149W RRP7P25368 297 aaPredicted RBP2.06□□□□□ -2.08
ATG9YDL149W BOS1P25385 244 aa2.06□□□□□ -2.08
ATG9YDL149W SPB1P25582 841 aaPredicted RBP2.06□□□□□ -2.08
ATG9YDL149W PAT1P25644 796 aaKnown RBP2.06□□□□□ -2.08
ATG9YDL149W RME1P32338 300 aaKnown RBP2.06□□□□□ -2.08
ATG9YDL149W MRE11P32829 692 aa2.06□□□□□ -2.08
ATG9YDL149W SWH1P35845 1188 aa2.06□□□□□ -2.08
ATG9YDL149W GPT2P36148 743 aa2.06□□□□□ -2.08
ATG9YDL149W GND1P38720 489 aaKnown RBP2.06□□□□□ -2.08
ATG9YDL149W WSS1P38838 269 aa2.06□□□□□ -2.08
ATG9YDL149W AIM46P38885 310 aa2.06□□□□□ -2.08
ATG9YDL149W SHU2P38957 223 aa2.06□□□□□ -2.08
ATG9YDL149W YHB1P39676 399 aaKnown RBP2.06□□□□□ -2.08
ATG9YDL149W UTP7P40055 554 aaKnown RBP2.06□□□□□ -2.08
ATG9YDL149W PFK26P40433 827 aaKnown RBP2.06□□□□□ -2.08
ATG9YDL149W ASG1P40467 964 aa2.06□□□□□ -2.08
ATG9YDL149W QDR2P40474 542 aa2.06□□□□□ -2.08
ATG9YDL149W YIL089WP40500 205 aa2.06□□□□□ -2.08
ATG9YDL149W IMA5P40884 581 aa2.06□□□□□ -2.08
ATG9YDL149W ROK1P45818 564 aaPredicted RBP2.06□□□□□ -2.08
ATG9YDL149W NIT3P49954 291 aa2.06□□□□□ -2.08
ATG9YDL149W PAN2P53010 1115 aaPredicted RBP2.06□□□□□ -2.08
ATG9YDL149W TEL2P53038 688 aa2.06□□□□□ -2.08
ATG9YDL149W NUT1P53114 1132 aa2.06□□□□□ -2.08
ATG9YDL149W YNR068CP53754 272 aa2.06□□□□□ -2.08
ATG9YDL149W BSC5P53755 489 aa2.06□□□□□ -2.08
ATG9YDL149W YDR514CQ04408 483 aa2.06□□□□□ -2.08
ATG9YDL149W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
ATG9YDL149W VPS54Q12071 889 aa2.06□□□□□ -2.08
ATG9YDL149W PCD1Q12524 340 aa2.06□□□□□ -2.08
ATG9YDL149W Q0182Q9ZZW1 134 aa2.06□□□□□ -2.08
ATG9YDL149W STE2D6VTK4 431 aa2.06□□□□□ -2.08
ATG9YDL149W PET123P17558 318 aa2.06□□□□□ -2.08
ATG9YDL149W PRP2P20095 876 aaPredicted RBP2.06□□□□□ -2.08
ATG9YDL149W ROX1P25042 368 aa2.06□□□□□ -2.08
ATG9YDL149W NFS1P25374 497 aa2.06□□□□□ -2.08
ATG9YDL149W YCL049CP25577 312 aa2.06□□□□□ -2.08
ATG9YDL149W SRP101P32916 621 aa2.06□□□□□ -2.08
ATG9YDL149W GCS1P35197 352 aa2.06□□□□□ -2.08
ATG9YDL149W YKR075CP36155 307 aa2.06□□□□□ -2.08
ATG9YDL149W AMN1P38285 549 aaPredicted RBP2.06□□□□□ -2.08
ATG9YDL149W PRE3P38624 215 aa2.06□□□□□ -2.08
ATG9YDL149W YHR097CP38809 366 aaKnown RBP2.06□□□□□ -2.08
ATG9YDL149W UTP9P38882 575 aaKnown RBP2.06□□□□□ -2.08
ATG9YDL149W RIC1P40395 1056 aa2.06□□□□□ -2.08
ATG9YDL149W EFM4P40516 257 aa2.06□□□□□ -2.08
ATG9YDL149W SKP2P42843 763 aa2.06□□□□□ -2.08
ATG9YDL149W STU2P46675 888 aa2.06□□□□□ -2.08
ATG9YDL149W ALY2P47029 1046 aa2.06□□□□□ -2.08
ATG9YDL149W UBC9P50623 157 aaPredicted RBP2.06□□□□□ -2.08
ATG9YDL149W MSN5P52918 1224 aa2.06□□□□□ -2.08
ATG9YDL149W EFM5P53200 248 aaKnown RBP2.06□□□□□ -2.08
ATG9YDL149W MDR1P53258 950 aa2.06□□□□□ -2.08
ATG9YDL149W DUS1P53759 423 aaKnown RBP2.06□□□□□ -2.08
ATG9YDL149W TIF35Q04067 274 aaKnown RBP2.06□□□□□ -2.08
ATG9YDL149W ATG33Q06485 197 aa2.06□□□□□ -2.08
ATG9YDL149W RSC3Q06639 885 aa2.06□□□□□ -2.08
ATG9YDL149W OMS1Q06668 471 aa2.06□□□□□ -2.08
ATG9YDL149W AVL9Q12500 764 aa2.06□□□□□ -2.08
ATG9YDL149W PHO5P00635 467 aa2.05□□□□□ -2.08
ATG9YDL149W CPA2P03965 1118 aaKnown RBP2.05□□□□□ -2.08
ATG9YDL149W PDC1P06169 563 aaKnown RBP2.05□□□□□ -2.08
ATG9YDL149W SNF1P06782 633 aaKnown RBP2.05□□□□□ -2.08
ATG9YDL149W FUM1P08417 488 aaKnown RBP2.05□□□□□ -2.08
ATG9YDL149W CLB3P24870 427 aa2.05□□□□□ -2.08
ATG9YDL149W SEC65P29478 273 aa2.05□□□□□ -2.08
ATG9YDL149W HOG1P32485 435 aa2.05□□□□□ -2.08
ATG9YDL149W KRE6P32486 720 aa2.05□□□□□ -2.08
ATG9YDL149W DOA4P32571 926 aa2.05□□□□□ -2.08
ATG9YDL149W GYP6P32806 458 aa2.05□□□□□ -2.08
ATG9YDL149W SER1P33330 395 aaKnown RBP2.05□□□□□ -2.08
ATG9YDL149W UIP5P36137 443 aa2.05□□□□□ -2.08
ATG9YDL149W SHM2P37291 469 aaKnown RBP2.05□□□□□ -2.08
ATG9YDL149W YBL029WP38201 376 aa2.05□□□□□ -2.08
ATG9YDL149W PCM1P38628 557 aaKnown RBP2.05□□□□□ -2.08
ATG9YDL149W YGR266WP53326 701 aa2.05□□□□□ -2.08
ATG9YDL149W RET3P53600 189 aa2.05□□□□□ -2.08
ATG9YDL149W SIW14P53965 281 aa2.05□□□□□ -2.08
ATG9YDL149W REX2P54964 269 aaKnown RBP2.05□□□□□ -2.08
ATG9YDL149W HOS3Q02959 697 aaKnown RBP2.05□□□□□ -2.08
ATG9YDL149W YML119WQ03208 357 aa2.05□□□□□ -2.08
ATG9YDL149W ERB1Q04660 807 aaKnown RBP2.05□□□□□ -2.08
ATG9YDL149W RTN1Q04947 295 aaKnown RBP2.05□□□□□ -2.08
ATG9YDL149W DPL1Q05567 589 aa2.05□□□□□ -2.08
ATG9YDL149W LUC7Q07508 261 aaPredicted RBP2.05□□□□□ -2.08
ATG9YDL149W SAM3Q08986 587 aa2.05□□□□□ -2.08
ATG9YDL149W NSI1Q12457 570 aa2.05□□□□□ -2.08
ATG9YDL149W YBR126W-AQ8TGU7 68 aa2.05□□□□□ -2.08
ATG9YDL149W YLR302CO13544 120 aa2.05□□□□□ -2.08
ATG9YDL149W CWH43P25618 953 aa2.05□□□□□ -2.08
ATG9YDL149W SYP1P25623 870 aaKnown RBP2.05□□□□□ -2.08
ATG9YDL149W PUP2P32379 260 aa2.05□□□□□ -2.08
ATG9YDL149W HBS1P32769 611 aaKnown RBP2.05□□□□□ -2.08
ATG9YDL149W SFA1P32771 386 aa2.05□□□□□ -2.08
ATG9YDL149W NPL6P32832 435 aa2.05□□□□□ -2.08
ATG9YDL149W MKS1P34072 584 aa2.05□□□□□ -2.08
ATG9YDL149W COY1P34237 679 aa2.05□□□□□ -2.08
ATG9YDL149W YKT6P36015 200 aaKnown RBP2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms