RNA–Protein interactions for RNA: YDL149W

ATG9, Transcript of Transmembrane protein involved in forming Cvt and autophagic vesicles, yeastyeast

Gene ATG9, Length 2,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG9YDL149W FAP1P53971 965 aa4.33□□□□□ -1.72
ATG9YDL149W PRY3P47033 881 aa4.04□□□□□ -1.76
ATG9YDL149W DRS1P32892 752 aaKnown RBP3.9□□□□□ -1.79
ATG9YDL149W RQC2Q12532 1038 aaKnown RBP3.75□□□□□ -1.81
ATG9YDL149W YCK3P39962 524 aa3.74□□□□□ -1.81
ATG9YDL149W HAA1Q12753 694 aaKnown RBP3.64□□□□□ -1.83
ATG9YDL149W TFA1P36100 482 aa3.62□□□□□ -1.83
ATG9YDL149W BFR2Q06631 534 aaKnown RBP3.61□□□□□ -1.83
ATG9YDL149W BUD31P25337 157 aaPredicted RBP3.56□□□□□ -1.84
ATG9YDL149W TAF7Q05021 590 aa3.56□□□□□ -1.84
ATG9YDL149W AAD16Q02895 342 aa3.38□□□□□ -1.87
ATG9YDL149W MTC1P47018 478 aaKnown RBP3.37□□□□□ -1.87
ATG9YDL149W SIS1P25294 352 aaKnown RBP3.3□□□□□ -1.88
ATG9YDL149W DMA1P38823 416 aa3.26□□□□□ -1.89
ATG9YDL149W LEO1P38439 464 aa3.16□□□□□ -1.9
ATG9YDL149W YGL015CP33199 130 aa3.14□□□□□ -1.91
ATG9YDL149W AVT3P36062 692 aa3.11□□□□□ -1.91
ATG9YDL149W DIP2Q12220 943 aaPredicted RBP3.11□□□□□ -1.91
ATG9YDL149W ISW2Q08773 1120 aa3.07□□□□□ -1.92
ATG9YDL149W PRI1P10363 409 aa3.06□□□□□ -1.92
ATG9YDL149W AIM44Q99299 758 aa3.04□□□□□ -1.92
ATG9YDL149W MRPL32P25348 183 aa3.03□□□□□ -1.92
ATG9YDL149W TSR3Q12094 313 aaKnown RBP3□□□□□ -1.93
ATG9YDL149W UBP9P39967 754 aa3□□□□□ -1.93
ATG9YDL149W PTP3P40048 928 aa2.98□□□□□ -1.93
ATG9YDL149W RPG1P38249 964 aaKnown RBP2.98□□□□□ -1.93
ATG9YDL149W RGA2Q06407 1009 aa2.98□□□□□ -1.93
ATG9YDL149W URN1Q06525 465 aaKnown RBP2.96□□□□□ -1.94
ATG9YDL149W DMA2P53924 522 aa2.95□□□□□ -1.94
ATG9YDL149W NAP1P25293 417 aaKnown RBP2.92□□□□□ -1.94
ATG9YDL149W LEU3P08638 886 aa2.91□□□□□ -1.94
ATG9YDL149W IOC4Q04213 475 aa2.89□□□□□ -1.95
ATG9YDL149W RLF2Q12495 606 aa2.88□□□□□ -1.95
ATG9YDL149W RPN1P38764 993 aaKnown RBP2.85□□□□□ -1.95
ATG9YDL149W IFH1P39520 1085 aa2.82□□□□□ -1.96
ATG9YDL149W YRB30P53107 440 aaPredicted RBP2.82□□□□□ -1.96
ATG9YDL149W RSE1Q04693 1361 aaKnown RBP2.81□□□□□ -1.96
ATG9YDL149W REB1P21538 810 aa2.8□□□□□ -1.96
ATG9YDL149W SPB4P25808 606 aaPredicted RBP2.78□□□□□ -1.96
ATG9YDL149W NOP7P53261 605 aaKnown RBP2.78□□□□□ -1.96
ATG9YDL149W SSP1P38871 571 aa2.78□□□□□ -1.96
ATG9YDL149W HGH1P48362 394 aaKnown RBP2.77□□□□□ -1.97
ATG9YDL149W SAS10Q12136 610 aaPredicted RBP2.77□□□□□ -1.97
ATG9YDL149W ABP1P15891 592 aaKnown RBP2.77□□□□□ -1.97
ATG9YDL149W BRL1P38770 471 aa2.76□□□□□ -1.97
ATG9YDL149W YML020WQ03722 664 aa2.76□□□□□ -1.97
ATG9YDL149W CKB1P43639 278 aa2.74□□□□□ -1.97
ATG9YDL149W TOP1P04786 769 aa2.73□□□□□ -1.97
ATG9YDL149W SNU71P53207 620 aaKnown RBP2.73□□□□□ -1.97
ATG9YDL149W ORC1P54784 914 aaPredicted RBP2.73□□□□□ -1.97
ATG9YDL149W ARP8Q12386 881 aaKnown RBP RIP-Chip data2.73□□□□□ -1.97not detected
ATG9YDL149W YJL171CP46992 396 aa2.72□□□□□ -1.97
ATG9YDL149W YAH1Q12184 172 aaKnown RBP2.72□□□□□ -1.97
ATG9YDL149W SLX8P40072 274 aa2.71□□□□□ -1.98
ATG9YDL149W MET10P39692 1035 aa2.7□□□□□ -1.98
ATG9YDL149W RPL17AP05740 184 aaKnown RBP2.7□□□□□ -1.98
ATG9YDL149W RPL17BP46990 184 aaKnown RBP2.7□□□□□ -1.98
ATG9YDL149W SUB1P54000 292 aaKnown RBP2.69□□□□□ -1.98
ATG9YDL149W KIN1P13185 1064 aa2.68□□□□□ -1.98
ATG9YDL149W SLD2P34252 453 aa2.67□□□□□ -1.98
ATG9YDL149W BRN1P38170 754 aa2.67□□□□□ -1.98
ATG9YDL149W RTS3P53289 263 aa2.67□□□□□ -1.98
ATG9YDL149W SSA1P10591 642 aaKnown RBP2.67□□□□□ -1.98
ATG9YDL149W VPS72Q03388 795 aa2.67□□□□□ -1.98
ATG9YDL149W VPS70P47161 811 aa2.67□□□□□ -1.98
ATG9YDL149W TIF4632P39936 914 aaKnown RBP2.66□□□□□ -1.98
ATG9YDL149W NUG1P40010 520 aaKnown RBP2.66□□□□□ -1.98
ATG9YDL149W GEF1P37020 779 aa2.66□□□□□ -1.98
ATG9YDL149W NOP8Q08287 484 aaPredicted RBP2.64□□□□□ -1.99
ATG9YDL149W YIL055CP40523 627 aaKnown RBP2.64□□□□□ -1.99
ATG9YDL149W YJR008WP47085 338 aa2.64□□□□□ -1.99
ATG9YDL149W ASF1P32447 279 aa2.63□□□□□ -1.99
ATG9YDL149W MNN4P36044 1178 aa2.62□□□□□ -1.99
ATG9YDL149W GLC3P32775 704 aa2.61□□□□□ -1.99
ATG9YDL149W RPL34AP87262 121 aaPredicted RBP2.61□□□□□ -1.99
ATG9YDL149W MDG1P53885 366 aa2.61□□□□□ -1.99
ATG9YDL149W MGA2P40578 1113 aa2.6□□□□□ -1.99
ATG9YDL149W YLR271WQ06152 274 aa2.6□□□□□ -1.99
ATG9YDL149W YTA7P40340 1379 aa2.6□□□□□ -1.99
ATG9YDL149W RPL34BP40525 121 aaKnown RBP2.59□□□□□ -1.99
ATG9YDL149W SUB2Q07478 446 aaKnown RBP2.59□□□□□ -1.99
ATG9YDL149W RRN6P32786 894 aa2.59□□□□□ -2
ATG9YDL149W RIM101P33400 625 aa2.59□□□□□ -2
ATG9YDL149W SET1P38827 1080 aaKnown RBP2.59□□□□□ -2
ATG9YDL149W YNR021WP53723 404 aaKnown RBP2.59□□□□□ -2
ATG9YDL149W UBP10P53874 792 aaPredicted RBP2.59□□□□□ -2
ATG9YDL149W ITT1Q04638 464 aa2.59□□□□□ -2
ATG9YDL149W GIN4Q12263 1142 aa2.59□□□□□ -2
ATG9YDL149W ATF2P53296 535 aa2.58□□□□□ -2
ATG9YDL149W SSA4P22202 642 aaKnown RBP2.58□□□□□ -2
ATG9YDL149W MRX12P47084 519 aa2.58□□□□□ -2
ATG9YDL149W SPC42P36094 363 aa2.58□□□□□ -2
ATG9YDL149W GUA1P38625 525 aaKnown RBP2.58□□□□□ -2
ATG9YDL149W BUD21Q08492 214 aaPredicted RBP2.58□□□□□ -2
ATG9YDL149W SWE1P32944 819 aa2.57□□□□□ -2
ATG9YDL149W LAM6Q08001 693 aa2.57□□□□□ -2
ATG9YDL149W PBS2P08018 668 aa2.57□□□□□ -2
ATG9YDL149W MAM3Q12296 706 aa2.57□□□□□ -2
ATG9YDL149W MAP2P38174 421 aaKnown RBP2.56□□□□□ -2
ATG9YDL149W YJL007CP47080 104 aa2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms