RNA–Protein interactions for RNA: YBR280C

SAF1, Transcript of F-Box protein involved in proteasome-dependent degradation of Aah1p, yeast

Gene SAF1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAF1	YBR280C	STE20	Q03497	939 aa	Known RBP	4.85	□□□□□ -1.63
SAF1	YBR280C	OPT2	Q06593	877 aa		4.85	□□□□□ -1.63
SAF1	YBR280C	RAD3	P06839	778 aa		4.84	□□□□□ -1.63
SAF1	YBR280C	CDC42	P19073	191 aa		4.84	□□□□□ -1.63
SAF1	YBR280C	HSP78	P33416	811 aa		4.84	□□□□□ -1.63
SAF1	YBR280C	STE13	P33894	931 aa		4.84	□□□□□ -1.63
SAF1	YBR280C	KIC1	P38692	1080 aa		4.84	□□□□□ -1.63
SAF1	YBR280C	BAT1	P38891	393 aa	Known RBP	4.84	□□□□□ -1.63
SAF1	YBR280C	YAP5	P40574	245 aa		4.84	□□□□□ -1.63
SAF1	YBR280C	VTC4	P47075	721 aa		4.84	□□□□□ -1.63
SAF1	YBR280C	CPR7	P47103	393 aa		4.84	□□□□□ -1.63
SAF1	YBR280C	HRD3	Q05787	833 aa		4.84	□□□□□ -1.63
SAF1	YBR280C	RCL1	Q08096	367 aa	Predicted RBP	4.84	□□□□□ -1.63
SAF1	YBR280C	CCR4	P31384	837 aa	Known RBP	4.84	□□□□□ -1.64
SAF1	YBR280C	SGE1	P33335	543 aa		4.84	□□□□□ -1.64
SAF1	YBR280C	SSP1	P38871	571 aa		4.84	□□□□□ -1.64
SAF1	YBR280C	YJR061W	P40355	935 aa		4.84	□□□□□ -1.64
SAF1	YBR280C	PFD1	P46988	109 aa		4.84	□□□□□ -1.64
SAF1	YBR280C	NPY1	P53164	384 aa		4.84	□□□□□ -1.64
SAF1	YBR280C	RTN1	Q04947	295 aa	Known RBP	4.84	□□□□□ -1.64
SAF1	YBR280C	RML2	P32611	393 aa		4.83	□□□□□ -1.64
SAF1	YBR280C	ECM13	P38195	257 aa		4.83	□□□□□ -1.64
SAF1	YBR280C	DUN1	P39009	513 aa		4.83	□□□□□ -1.64
SAF1	YBR280C	PSY2	P40164	858 aa		4.83	□□□□□ -1.64
SAF1	YBR280C	UBP7	P40453	1071 aa		4.83	□□□□□ -1.64
SAF1	YBR280C	NUP84	P52891	726 aa		4.83	□□□□□ -1.64
SAF1	YBR280C	PIR3	Q03180	325 aa		4.83	□□□□□ -1.64
SAF1	YBR280C	CLU1	Q03690	1277 aa	Known RBP	4.83	□□□□□ -1.64
SAF1	YBR280C	GIR2	Q03768	265 aa	Predicted RBP	4.83	□□□□□ -1.64
SAF1	YBR280C	ECM3	Q99252	613 aa		4.83	□□□□□ -1.64
SAF1	YBR280C	OM45	P16547	393 aa		4.82	□□□□□ -1.64
SAF1	YBR280C	SLX5	P32828	619 aa	Known RBP	4.82	□□□□□ -1.64
SAF1	YBR280C	NOP4	P37838	685 aa	Known RBP	4.82	□□□□□ -1.64
SAF1	YBR280C	DUG1	P43616	481 aa	Known RBP	4.82	□□□□□ -1.64
SAF1	YBR280C	PYK2	P52489	506 aa	Known RBP	4.82	□□□□□ -1.64
SAF1	YBR280C	FLC3	P53121	802 aa		4.82	□□□□□ -1.64
SAF1	YBR280C	PEX13	P80667	386 aa		4.82	□□□□□ -1.64
SAF1	YBR280C	SPG3	Q04398	127 aa	Predicted RBP	4.82	□□□□□ -1.64
SAF1	YBR280C	RTK1	Q12100	620 aa	Predicted RBP	4.82	□□□□□ -1.64
SAF1	YBR280C	LCB4	Q12246	624 aa		4.82	□□□□□ -1.64
SAF1	YBR280C	SPO21	Q12411	609 aa		4.82	□□□□□ -1.64
SAF1	YBR280C	ENO2	P00925	437 aa	Known RBP	4.82	□□□□□ -1.64
SAF1	YBR280C	KEX1	P09620	729 aa		4.82	□□□□□ -1.64
SAF1	YBR280C	MAK16	P10962	306 aa	Predicted RBP	4.82	□□□□□ -1.64
SAF1	YBR280C	ARF2	P19146	181 aa	Known RBP	4.82	□□□□□ -1.64
SAF1	YBR280C	LEU5	P38702	357 aa		4.82	□□□□□ -1.64
SAF1	YBR280C	WSC4	P38739	605 aa		4.82	□□□□□ -1.64
SAF1	YBR280C	YPS6	P40583	537 aa		4.82	□□□□□ -1.64
SAF1	YBR280C	PPM1	Q04081	328 aa		4.82	□□□□□ -1.64
SAF1	YBR280C	YOL075C	Q08234	1294 aa		4.82	□□□□□ -1.64
SAF1	YBR280C	TRE1	Q08919	783 aa		4.82	□□□□□ -1.64
SAF1	YBR280C	FAL1	Q12099	399 aa	Known RBP	4.82	□□□□□ -1.64
SAF1	YBR280C	CAP1	P28495	268 aa	Known RBP	4.81	□□□□□ -1.64
SAF1	YBR280C	CDC11	P32458	415 aa		4.81	□□□□□ -1.64
SAF1	YBR280C	SAC6	P32599	642 aa	Known RBP	4.81	□□□□□ -1.64
SAF1	YBR280C	RFT1	P38206	574 aa	Predicted RBP	4.81	□□□□□ -1.64
SAF1	YBR280C	RSM7	P47150	247 aa		4.81	□□□□□ -1.64
SAF1	YBR280C	MND1	P53102	219 aa		4.81	□□□□□ -1.64
SAF1	YBR280C	YGL036W	P53185	909 aa	Predicted RBP	4.81	□□□□□ -1.64
SAF1	YBR280C	YMR206W	Q03695	313 aa		4.81	□□□□□ -1.64
SAF1	YBR280C	ECM38	Q05902	660 aa	Predicted RBP	4.81	□□□□□ -1.64
SAF1	YBR280C	APC5	Q08683	685 aa		4.81	□□□□□ -1.64
SAF1	YBR280C	VPS54	Q12071	889 aa		4.81	□□□□□ -1.64
SAF1	YBR280C	YBR053C	P38235	358 aa		4.8	□□□□□ -1.64
SAF1	YBR280C	TIF34	P40217	347 aa	Known RBP	4.8	□□□□□ -1.64
SAF1	YBR280C	RPT2	P40327	437 aa	Known RBP	4.8	□□□□□ -1.64
SAF1	YBR280C	ASG7	P46993	209 aa		4.8	□□□□□ -1.64
SAF1	YBR280C	MNN10	P50108	393 aa	Known RBP	4.8	□□□□□ -1.64
SAF1	YBR280C	HFM1	P51979	1187 aa		4.8	□□□□□ -1.64
SAF1	YBR280C	DRN1	P53255	507 aa	Known RBP	4.8	□□□□□ -1.64
SAF1	YBR280C	PMT7	Q06644	662 aa		4.8	□□□□□ -1.64
SAF1	YBR280C	RSB1	Q08417	382 aa		4.8	□□□□□ -1.64
SAF1	YBR280C	AI5_BETA	Q9ZZX0	354 aa		4.8	□□□□□ -1.64
SAF1	YBR280C	BIK1	P11709	440 aa		4.8	□□□□□ -1.64
SAF1	YBR280C	SNF5	P18480	905 aa		4.8	□□□□□ -1.64
SAF1	YBR280C	YJU3	P28321	313 aa		4.8	□□□□□ -1.64
SAF1	YBR280C	PSO2	P30620	661 aa		4.8	□□□□□ -1.64
SAF1	YBR280C	DCW1	P36091	449 aa		4.8	□□□□□ -1.64
SAF1	YBR280C	CTM1	P38818	585 aa		4.8	□□□□□ -1.64
SAF1	YBR280C	FIG4	P42837	879 aa		4.8	□□□□□ -1.64
SAF1	YBR280C	COS5	P47187	383 aa		4.8	□□□□□ -1.64
SAF1	YBR280C	COQ5	P49017	307 aa		4.8	□□□□□ -1.64
SAF1	YBR280C	LSC2	P53312	427 aa		4.8	□□□□□ -1.64
SAF1	YBR280C	YNL144C	P53907	740 aa		4.8	□□□□□ -1.64
SAF1	YBR280C	AQR1	P53943	586 aa		4.8	□□□□□ -1.64
SAF1	YBR280C	GPD1	Q00055	391 aa	Known RBP	4.8	□□□□□ -1.64
SAF1	YBR280C	YPL062W	Q02781	134 aa		4.8	□□□□□ -1.64
SAF1	YBR280C	YMR187C	Q03236	431 aa		4.8	□□□□□ -1.64
SAF1	YBR280C	YSH1	Q06224	779 aa	Predicted RBP	4.8	□□□□□ -1.64
SAF1	YBR280C	SPP382	Q06411	708 aa	Predicted RBP	4.8	□□□□□ -1.64
SAF1	YBR280C	MDM38	Q08179	573 aa		4.8	□□□□□ -1.64
SAF1	YBR280C	NDD1	Q08887	554 aa		4.8	□□□□□ -1.64
SAF1	YBR280C	SVS1	Q12254	260 aa		4.8	□□□□□ -1.64
SAF1	YBR280C	ARP7	Q12406	477 aa		4.8	□□□□□ -1.64
SAF1	YBR280C	TRS33	Q99394	268 aa		4.8	□□□□□ -1.64
SAF1	YBR280C	JIP3	O13555	125 aa		4.79	□□□□□ -1.64
SAF1	YBR280C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
SAF1	YBR280C	SFP1	P32432	683 aa		4.79	□□□□□ -1.64
SAF1	YBR280C	YMC2	P38087	329 aa		4.79	□□□□□ -1.64
SAF1	YBR280C	PFS1	P38872	237 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 19 ms