RNA–Protein interactions for RNA: YBR115C

LYS2, Transcript of Alpha aminoadipate reductase, yeast

Gene LYS2, Length 4,179 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LYS2	YBR115C	TFC1	P32367	649 aa		4.61	□□□□□ -1.67
LYS2	YBR115C	NPT1	P39683	429 aa	Known RBP	4.61	□□□□□ -1.67
LYS2	YBR115C	EMW1	P42842	904 aa	Known RBP	4.61	□□□□□ -1.67
LYS2	YBR115C	PPN1	Q04119	674 aa		4.61	□□□□□ -1.67
LYS2	YBR115C	NMD4	Q12129	218 aa		4.61	□□□□□ -1.67
LYS2	YBR115C	LDB17	Q12342	491 aa		4.61	□□□□□ -1.67
LYS2	YBR115C	MTF2	P10849	440 aa		4.6	□□□□□ -1.67
LYS2	YBR115C	MTF1	P14908	341 aa	Known RBP	4.6	□□□□□ -1.67
LYS2	YBR115C	HOP1	P20050	605 aa		4.6	□□□□□ -1.67
LYS2	YBR115C	AGP1	P25376	633 aa		4.6	□□□□□ -1.67
LYS2	YBR115C	ECM1	P39715	212 aa		4.6	□□□□□ -1.67
LYS2	YBR115C	YRB1	P41920	201 aa	Known RBP	4.6	□□□□□ -1.67
LYS2	YBR115C	UBP2	Q01476	1272 aa		4.6	□□□□□ -1.67
LYS2	YBR115C	INA17	Q02888	182 aa		4.6	□□□□□ -1.67
LYS2	YBR115C	MSC3	Q05812	728 aa		4.6	□□□□□ -1.67
LYS2	YBR115C	BRE4	Q07660	1125 aa		4.6	□□□□□ -1.67
LYS2	YBR115C	MST1	P07236	462 aa		4.6	□□□□□ -1.67
LYS2	YBR115C	PRP22	P24384	1145 aa	Known RBP	4.6	□□□□□ -1.67
LYS2	YBR115C	IRR1	P40541	1150 aa		4.6	□□□□□ -1.67
LYS2	YBR115C	YAR1	P46683	200 aa		4.6	□□□□□ -1.67
LYS2	YBR115C	IML2	P47031	731 aa		4.6	□□□□□ -1.67
LYS2	YBR115C	ALT1	P52893	592 aa		4.6	□□□□□ -1.67
LYS2	YBR115C	NUT1	P53114	1132 aa		4.6	□□□□□ -1.67
LYS2	YBR115C	CIT1	P00890	479 aa		4.6	□□□□□ -1.67
LYS2	YBR115C	SGF29	P25554	259 aa		4.6	□□□□□ -1.67
LYS2	YBR115C	MDJ1	P35191	511 aa		4.6	□□□□□ -1.67
LYS2	YBR115C	MRPL40	P36534	297 aa		4.6	□□□□□ -1.67
LYS2	YBR115C	CCT7	P42943	550 aa	Known RBP	4.6	□□□□□ -1.67
LYS2	YBR115C	YPL225W	Q08971	146 aa	Known RBP	4.6	□□□□□ -1.67
LYS2	YBR115C	PTC3	P34221	468 aa	Known RBP	4.59	□□□□□ -1.67
LYS2	YBR115C	KAP104	P38217	918 aa	Known RBP	4.59	□□□□□ -1.67
LYS2	YBR115C	ZAP1	P47043	880 aa		4.59	□□□□□ -1.67
LYS2	YBR115C	PMT3	P47190	753 aa		4.59	□□□□□ -1.67
LYS2	YBR115C	VMA10	P48836	114 aa	Known RBP	4.59	□□□□□ -1.67
LYS2	YBR115C	KTR6	P54070	446 aa		4.59	□□□□□ -1.67
LYS2	YBR115C	PRO2	P54885	456 aa	Known RBP	4.59	□□□□□ -1.67
LYS2	YBR115C	CMR1	Q12510	522 aa	Known RBP	4.59	□□□□□ -1.67
LYS2	YBR115C	NOP14	Q99207	810 aa	Known RBP	4.59	□□□□□ -1.67
LYS2	YBR115C	HAP4	P14064	554 aa		4.59	□□□□□ -1.67
LYS2	YBR115C	RPB4	P20433	221 aa	Predicted RBP	4.59	□□□□□ -1.67
LYS2	YBR115C	RAM1	P22007	431 aa		4.59	□□□□□ -1.67
LYS2	YBR115C	NUF2	P33895	451 aa		4.59	□□□□□ -1.67
LYS2	YBR115C	SAH1	P39954	449 aa	Known RBP	4.59	□□□□□ -1.67
LYS2	YBR115C	RPN3	P40016	523 aa	Known RBP	4.59	□□□□□ -1.67
LYS2	YBR115C	YFL034W	P43564	1073 aa		4.59	□□□□□ -1.67
LYS2	YBR115C	MRPS35	P53292	345 aa		4.59	□□□□□ -1.67
LYS2	YBR115C	TMN2	Q04562	672 aa		4.59	□□□□□ -1.67
LYS2	YBR115C	PUS1	Q12211	544 aa	Known RBP	4.59	□□□□□ -1.67
LYS2	YBR115C	HSP42	Q12329	375 aa		4.59	□□□□□ -1.67
LYS2	YBR115C	ATP14	Q12349	124 aa		4.59	□□□□□ -1.67
LYS2	YBR115C	SPE1	P08432	466 aa		4.59	□□□□□ -1.68
LYS2	YBR115C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.68	not detected
LYS2	YBR115C	SKG6	P32900	734 aa	Predicted RBP	4.59	□□□□□ -1.68
LYS2	YBR115C	RER2	P35196	286 aa		4.59	□□□□□ -1.68
LYS2	YBR115C	LHS1	P36016	881 aa		4.59	□□□□□ -1.68
LYS2	YBR115C	SUL1	P38359	859 aa		4.59	□□□□□ -1.68
LYS2	YBR115C	SIP3	P38717	1229 aa		4.59	□□□□□ -1.68
LYS2	YBR115C	ROK1	P45818	564 aa	Predicted RBP	4.59	□□□□□ -1.68
LYS2	YBR115C	RPA34	P47006	233 aa	Predicted RBP	4.59	□□□□□ -1.68
LYS2	YBR115C	APT1	P49435	187 aa	Known RBP	4.59	□□□□□ -1.68
LYS2	YBR115C	COP1	P53622	1201 aa	Known RBP	4.59	□□□□□ -1.68
LYS2	YBR115C	YNL058C	P53947	316 aa		4.59	□□□□□ -1.68
LYS2	YBR115C	SLG1	P54867	378 aa		4.59	□□□□□ -1.68
LYS2	YBR115C	RTT103	Q05543	409 aa		4.59	□□□□□ -1.68
LYS2	YBR115C	SUE1	Q06524	206 aa		4.59	□□□□□ -1.68
LYS2	YBR115C	TSR3	Q12094	313 aa	Known RBP	4.59	□□□□□ -1.68
LYS2	YBR115C	YOR022C	Q12204	715 aa		4.59	□□□□□ -1.68
LYS2	YBR115C	PET18	P25362	215 aa		4.58	□□□□□ -1.68
LYS2	YBR115C	YMR134W	P40207	237 aa		4.58	□□□□□ -1.68
LYS2	YBR115C	IMP4	P53941	290 aa	Known RBP	4.58	□□□□□ -1.68
LYS2	YBR115C	KAP120	Q02932	1032 aa		4.58	□□□□□ -1.68
LYS2	YBR115C	YLR287C	Q05881	355 aa		4.58	□□□□□ -1.68
LYS2	YBR115C	YDL129W	Q07555	291 aa		4.58	□□□□□ -1.68
LYS2	YBR115C	RSA4	P25382	515 aa	Known RBP	4.58	□□□□□ -1.68
LYS2	YBR115C	OAF3	P36023	863 aa		4.58	□□□□□ -1.68
LYS2	YBR115C	RCY1	P39531	840 aa		4.58	□□□□□ -1.68
LYS2	YBR115C	TOK1	P40310	691 aa		4.58	□□□□□ -1.68
LYS2	YBR115C	VMA13	P41807	478 aa	Known RBP	4.58	□□□□□ -1.68
LYS2	YBR115C	YFL066C	P43538	392 aa		4.58	□□□□□ -1.68
LYS2	YBR115C	VPS25	P47142	202 aa		4.58	□□□□□ -1.68
LYS2	YBR115C	RIM21	P48565	533 aa		4.58	□□□□□ -1.68
LYS2	YBR115C	RPL6A	Q02326	176 aa	Known RBP	4.58	□□□□□ -1.68
LYS2	YBR115C	TOR2	P32600	2474 aa	Known RBP	4.58	□□□□□ -1.68
LYS2	YBR115C	HIS4	P00815	799 aa	Known RBP	4.58	□□□□□ -1.68
LYS2	YBR115C	SPS1	P08458	490 aa		4.58	□□□□□ -1.68
LYS2	YBR115C	RPL19A	P0CX82	189 aa	Known RBP	4.58	□□□□□ -1.68
LYS2	YBR115C	RPL19B	P0CX83	189 aa	Predicted RBP	4.58	□□□□□ -1.68
LYS2	YBR115C	KAR1	P11927	433 aa		4.58	□□□□□ -1.68
LYS2	YBR115C	YCR016W	P25617	290 aa	Known RBP	4.58	□□□□□ -1.68
LYS2	YBR115C	GPI10	P30777	616 aa		4.58	□□□□□ -1.68
LYS2	YBR115C	TCD1	P38756	429 aa		4.58	□□□□□ -1.68
LYS2	YBR115C	FYV10	P40492	516 aa		4.58	□□□□□ -1.68
LYS2	YBR115C	MAF1	P41910	395 aa		4.58	□□□□□ -1.68
LYS2	YBR115C	LOH1	P47055	219 aa		4.58	□□□□□ -1.68
LYS2	YBR115C	RPN14	P53196	417 aa		4.58	□□□□□ -1.68
LYS2	YBR115C	RET3	P53600	189 aa		4.58	□□□□□ -1.68
LYS2	YBR115C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
LYS2	YBR115C	ECM23	Q02710	187 aa		4.58	□□□□□ -1.68
LYS2	YBR115C	ATG23	Q06671	453 aa		4.58	□□□□□ -1.68
LYS2	YBR115C	GPI13	Q07830	1017 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 68.1 ms