RNA–Protein interactions for RNA: YPL116W

HOS3, Transcript of Trichostatin A-insensitive homodimeric histone deacetylase (HDAC), yeast

Gene HOS3, Length 2,094 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOS3	YPL116W	ENA2	Q01896	1091 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	MFM1	Q02783	413 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	HER2	Q03557	464 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	VPS64	Q03944	604 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	YPD1	Q07688	167 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	FAP7	Q12055	197 aa	Predicted RBP	4.23	□□□□□ -1.73
HOS3	YPL116W	ATG29	Q12092	213 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	SCM3	Q12334	223 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	GYP5	Q12344	894 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	ENA5	Q12691	1091 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	GEA1	P47102	1408 aa	Predicted RBP	4.23	□□□□□ -1.73
HOS3	YPL116W	NUP170	P38181	1502 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	LTE1	P07866	1435 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	AUS1	Q08409	1394 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	BI4	P03879	638 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	MET6	P05694	767 aa	Known RBP	4.23	□□□□□ -1.73
HOS3	YPL116W	SNF1	P06782	633 aa	Known RBP	4.23	□□□□□ -1.73
HOS3	YPL116W	TRL1	P09880	827 aa	Known RBP	4.23	□□□□□ -1.73
HOS3	YPL116W	IDI1	P15496	288 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	YPK2	P18961	677 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	DAL1	P32375	460 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	CDC12	P32468	407 aa	Known RBP	4.23	□□□□□ -1.73
HOS3	YPL116W	PMT1	P33775	817 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	NUP133	P36161	1157 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	SDH8	P38345	138 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	VMA22	P38784	181 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	LRP1	P38801	184 aa	Known RBP	4.23	□□□□□ -1.73
HOS3	YPL116W	HXT6	P39003	570 aa	Known RBP	4.23	□□□□□ -1.73
HOS3	YPL116W	HXT7	P39004	570 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	THO1	P40040	218 aa	Known RBP	4.23	□□□□□ -1.73
HOS3	YPL116W	RTS2	P40962	232 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	GPD2	P41911	440 aa	Known RBP	4.23	□□□□□ -1.73
HOS3	YPL116W	CTK3	P46963	296 aa	Predicted RBP	4.23	□□□□□ -1.73
HOS3	YPL116W	MNN11	P46985	422 aa	Known RBP	4.23	□□□□□ -1.73
HOS3	YPL116W	FMS1	P50264	508 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	TEL2	P53038	688 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	NCS6	P53088	359 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	ARC35	P53731	342 aa	Known RBP	4.23	□□□□□ -1.73
HOS3	YPL116W	RCM1	P53972	490 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	CIK1	Q01649	594 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	JIP4	Q03361	876 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	FIN1	Q03898	291 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	RBA50	Q04418	439 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	RTT103	Q05543	409 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	YFT2	Q06676	274 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	GYP1	Q08484	637 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	SMF3	Q12078	473 aa	Predicted RBP	4.23	□□□□□ -1.73
HOS3	YPL116W	YDL109C	Q12103	647 aa		4.23	□□□□□ -1.73
HOS3	YPL116W	GCD2	P12754	651 aa	Predicted RBP	4.22	□□□□□ -1.73
HOS3	YPL116W	THR1	P17423	357 aa	Known RBP	4.22	□□□□□ -1.73
HOS3	YPL116W	RDS2	P19541	446 aa	Known RBP	4.22	□□□□□ -1.73
HOS3	YPL116W	DBP3	P20447	523 aa	Known RBP	4.22	□□□□□ -1.73
HOS3	YPL116W	DBP1	P24784	617 aa	Known RBP	4.22	□□□□□ -1.73
HOS3	YPL116W	PTP1	P25044	335 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	YCR016W	P25617	290 aa	Known RBP	4.22	□□□□□ -1.73
HOS3	YPL116W	GUT2	P32191	649 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	EFT1	P32324	842 aa	Known RBP	4.22	□□□□□ -1.73
HOS3	YPL116W	VPS17	P32913	551 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	SEA4	P38164	1038 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	TDA3	P38758	523 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	CRP1	P38845	465 aa	Known RBP	4.22	□□□□□ -1.73
HOS3	YPL116W	PRM9	P39551	298 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	YJL049W	P47048	450 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	COX16	P47081	118 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	ILM1	P47155	203 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	VPS70	P47161	811 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	GNP1	P48813	663 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	MLC1	P53141	149 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	SPC105	P53148	917 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	OKP1	P53298	406 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	FPK1	P53739	893 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	TFB2	Q02939	513 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	YMR114C	Q04471	368 aa	Known RBP	4.22	□□□□□ -1.73
HOS3	YPL116W	PDR8	Q06149	701 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	PIG1	Q06216	648 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	DXO1	Q06349	442 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	YEH2	Q07950	538 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	DIS3	Q08162	1001 aa	Known RBP	4.22	□□□□□ -1.73
HOS3	YPL116W	FMP40	Q08968	688 aa	Predicted RBP	4.22	□□□□□ -1.73
HOS3	YPL116W	YPR204W	Q08995	1032 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	AEP3	Q12089	606 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	MED1	Q12321	566 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	IES3	Q12345	250 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	SPO21	Q12411	609 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	ARP6	Q12509	438 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	LAM4	P38800	1345 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	HXK1	P04806	485 aa	Known RBP	4.22	□□□□□ -1.73
HOS3	YPL116W	PHO8	P11491	566 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	MSD1	P15179	658 aa	Known RBP	4.22	□□□□□ -1.73
HOS3	YPL116W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
HOS3	YPL116W	URA4	P20051	364 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	GLN1	P32288	370 aa	Known RBP	4.22	□□□□□ -1.73
HOS3	YPL116W	LOS1	P33418	1100 aa	Predicted RBP	4.22	□□□□□ -1.73
HOS3	YPL116W	DBP7	P36120	742 aa	Known RBP	4.22	□□□□□ -1.73
HOS3	YPL116W	CDC27	P38042	758 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	BMT2	P38278	337 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	RGD1	P38339	666 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	CBR1	P38626	284 aa	Known RBP	4.22	□□□□□ -1.73
HOS3	YPL116W	LSM12	P38828	187 aa	Known RBP	4.22	□□□□□ -1.73
HOS3	YPL116W	RVS167	P39743	482 aa	Known RBP	4.22	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms