RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C SVF1Q05515 481 aa5.08□□□□□ -1.6
SNF8YPL002C THI3Q07471 609 aa5.08□□□□□ -1.6
SNF8YPL002C PSF3Q12146 194 aa5.08□□□□□ -1.6
SNF8YPL002C SUP35P05453 685 aaKnown RBP5.07□□□□□ -1.6
SNF8YPL002C SEC21P32074 935 aaKnown RBP5.07□□□□□ -1.6
SNF8YPL002C PBY1P38254 753 aa5.07□□□□□ -1.6
SNF8YPL002C BUL2Q03758 920 aaKnown RBP5.07□□□□□ -1.6
SNF8YPL002C ADE8P04161 214 aa5.06□□□□□ -1.6
SNF8YPL002C PFK2P16862 959 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
SNF8YPL002C ERG7P38604 731 aa5.06□□□□□ -1.6
SNF8YPL002C VAC8P39968 578 aa5.06□□□□□ -1.6
SNF8YPL002C SIT1P39980 628 aa5.06□□□□□ -1.6
SNF8YPL002C NUG1P40010 520 aaKnown RBP5.06□□□□□ -1.6
SNF8YPL002C RTR1P40084 226 aaPredicted RBP5.06□□□□□ -1.6
SNF8YPL002C ALD6P54115 500 aaKnown RBP5.06□□□□□ -1.6
SNF8YPL002C IRC4Q03036 179 aa5.06□□□□□ -1.6
SNF8YPL002C YMR206WQ03695 313 aa5.06□□□□□ -1.6
SNF8YPL002C TMN2Q04562 672 aa5.06□□□□□ -1.6
SNF8YPL002C YOL057WQ08225 711 aa5.06□□□□□ -1.6
SNF8YPL002C FLO11P08640 1367 aa5.05□□□□□ -1.6
SNF8YPL002C ADR1P07248 1323 aa5.05□□□□□ -1.6
SNF8YPL002C HBS1P32769 611 aaKnown RBP5.05□□□□□ -1.6
SNF8YPL002C SPF1P39986 1215 aaKnown RBP5.05□□□□□ -1.6
SNF8YPL002C YFL040WP43562 540 aa5.05□□□□□ -1.6
SNF8YPL002C NET1P47035 1189 aa5.05□□□□□ -1.6
SNF8YPL002C STB4P50104 949 aa5.05□□□□□ -1.6
SNF8YPL002C WRS1Q12109 432 aaKnown RBP5.05□□□□□ -1.6
SNF8YPL002C TY3A-GQ12173 290 aa5.05□□□□□ -1.6
SNF8YPL002C TY3A-IQ99219 290 aa5.05□□□□□ -1.6
SNF8YPL002C YMR084WA2P2R3 262 aa5.04□□□□□ -1.6
SNF8YPL002C LCB1P25045 558 aaKnown RBP5.04□□□□□ -1.6
SNF8YPL002C MCD4P36051 919 aa5.04□□□□□ -1.6
SNF8YPL002C TOK1P40310 691 aa5.04□□□□□ -1.6
SNF8YPL002C SDP1P40479 209 aa5.04□□□□□ -1.6
SNF8YPL002C IRR1P40541 1150 aa5.04□□□□□ -1.6
SNF8YPL002C RNT1Q02555 471 aa5.04□□□□□ -1.6
SNF8YPL002C MUK1Q02866 612 aa5.04□□□□□ -1.6
SNF8YPL002C YML122CQ03207 126 aa5.04□□□□□ -1.6
SNF8YPL002C OMS1Q06668 471 aa5.04□□□□□ -1.6
SNF8YPL002C PEX19Q07418 342 aa5.04□□□□□ -1.6
SNF8YPL002C MCH5Q08777 521 aa5.04□□□□□ -1.6
SNF8YPL002C PRD1P25375 712 aa5.03□□□□□ -1.6
SNF8YPL002C NUP133P36161 1157 aa5.03□□□□□ -1.6
SNF8YPL002C YIL108WP40483 696 aaKnown RBP5.03□□□□□ -1.6
SNF8YPL002C PFD1P46988 109 aa5.03□□□□□ -1.6
SNF8YPL002C IOC4Q04213 475 aa5.03□□□□□ -1.6
SNF8YPL002C CFT2Q12102 859 aaPredicted RBP5.03□□□□□ -1.6
SNF8YPL002C SNU66Q12420 587 aaPredicted RBP5.03□□□□□ -1.6
SNF8YPL002C SAC3P46674 1301 aa5.02□□□□□ -1.61
SNF8YPL002C ALG7P07286 448 aa5.02□□□□□ -1.61
SNF8YPL002C TUB3P09734 445 aaKnown RBP5.02□□□□□ -1.61
SNF8YPL002C CDC60P26637 1090 aaKnown RBP5.02□□□□□ -1.61
SNF8YPL002C OCT1P35999 772 aa5.02□□□□□ -1.61
SNF8YPL002C YBR184WP38299 523 aa5.02□□□□□ -1.61
SNF8YPL002C KEL1P38853 1164 aaKnown RBP5.02□□□□□ -1.61
SNF8YPL002C CTF8P38877 133 aa5.02□□□□□ -1.61
SNF8YPL002C VAB2P40003 282 aa5.02□□□□□ -1.61
SNF8YPL002C LYS14P40971 790 aa5.02□□□□□ -1.61
SNF8YPL002C RRP46P53256 223 aaPredicted RBP5.02□□□□□ -1.61
SNF8YPL002C HDA1P53973 706 aa5.02□□□□□ -1.61
SNF8YPL002C TDA5Q06417 326 aaKnown RBP5.02□□□□□ -1.61
SNF8YPL002C SWI1P09547 1314 aa5.01□□□□□ -1.61
SNF8YPL002C PPR1P07272 904 aaPredicted RBP5.01□□□□□ -1.61
SNF8YPL002C RFA1P22336 621 aaKnown RBP5.01□□□□□ -1.61
SNF8YPL002C CEP3P40969 608 aa5.01□□□□□ -1.61
SNF8YPL002C YJR008WP47085 338 aa5.01□□□□□ -1.61
SNF8YPL002C CCM1P48237 864 aaPredicted RBP5.01□□□□□ -1.61
SNF8YPL002C TPO2P53283 614 aa5.01□□□□□ -1.61
SNF8YPL002C FMP30Q02883 468 aa5.01□□□□□ -1.61
SNF8YPL002C VPS30Q02948 557 aa5.01□□□□□ -1.61
SNF8YPL002C ECM30Q06673 1274 aa5.01□□□□□ -1.61
SNF8YPL002C YOR131CQ12486 218 aa5.01□□□□□ -1.61
SNF8YPL002C NUM1Q00402 2748 aa5□□□□□ -1.61
SNF8YPL002C MRP7P12687 371 aa5□□□□□ -1.61
SNF8YPL002C TYE7P33122 291 aaPredicted RBP5□□□□□ -1.61
SNF8YPL002C CTF13P35203 478 aa5□□□□□ -1.61
SNF8YPL002C QRI1P43123 477 aaKnown RBP5□□□□□ -1.61
SNF8YPL002C YFH7P43591 353 aa5□□□□□ -1.61
SNF8YPL002C YKR011CQ02209 353 aa5□□□□□ -1.61
SNF8YPL002C LCD1Q04377 747 aa5□□□□□ -1.61
SNF8YPL002C ACF2Q12168 779 aa5□□□□□ -1.61
SNF8YPL002C AHC1Q12433 566 aa5□□□□□ -1.61
SNF8YPL002C TOR1P35169 2470 aa4.99□□□□□ -1.61
SNF8YPL002C PRP9P19736 530 aaKnown RBP4.99□□□□□ -1.61
SNF8YPL002C URA1P28272 314 aaPredicted RBP4.99□□□□□ -1.61
SNF8YPL002C UIP5P36137 443 aa4.99□□□□□ -1.61
SNF8YPL002C YBR284WP38150 797 aa4.99□□□□□ -1.61
SNF8YPL002C ACA1P39970 489 aa4.99□□□□□ -1.61
SNF8YPL002C MPP10P47083 593 aaKnown RBP4.99□□□□□ -1.61
SNF8YPL002C YPR071WQ12346 211 aa4.99□□□□□ -1.61
SNF8YPL002C PRP4P20053 465 aaKnown RBP4.98□□□□□ -1.61
SNF8YPL002C RPT3P33298 428 aaKnown RBP4.98□□□□□ -1.61
SNF8YPL002C REC104P33323 182 aa4.98□□□□□ -1.61
SNF8YPL002C ALR2P43553 858 aa4.98□□□□□ -1.61
SNF8YPL002C MRPS35P53292 345 aa4.98□□□□□ -1.61
SNF8YPL002C FMP25Q08023 583 aa4.98□□□□□ -1.61
SNF8YPL002C ICL2Q12031 575 aa4.98□□□□□ -1.61
SNF8YPL002C SWM1Q12379 170 aa4.98□□□□□ -1.61
SNF8YPL002C TRM11Q12463 433 aa4.98□□□□□ -1.61
SNF8YPL002C PPS1P38148 807 aa4.97□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms