RNA–Protein interactions for RNA: YNR001C

CIT1, Transcript of Citrate synthase, yeastyeast

Gene CIT1, Length 1,440 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT1YNR001C MAP1Q01662 387 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
CIT1YNR001C YDR514CQ04408 483 aa4.31□□□□□ -1.72
CIT1YNR001C RSC3Q06639 885 aa4.31□□□□□ -1.72
CIT1YNR001C OPY2Q06810 360 aa4.31□□□□□ -1.72
CIT1YNR001C TAD3Q9URQ3 322 aa4.31□□□□□ -1.72
CIT1YNR001C RPO21P04050 1733 aaKnown RBP4.31□□□□□ -1.72
CIT1YNR001C YOR1P53049 1477 aa4.31□□□□□ -1.72
CIT1YNR001C SSM4P40318 1319 aa4.3□□□□□ -1.72
CIT1YNR001C CDC31P06704 161 aaKnown RBP4.3□□□□□ -1.72
CIT1YNR001C COX11P19516 300 aaKnown RBP4.3□□□□□ -1.72
CIT1YNR001C RER1P25560 188 aa4.3□□□□□ -1.72
CIT1YNR001C HOG1P32485 435 aa4.3□□□□□ -1.72
CIT1YNR001C RFC5P38251 354 aa4.3□□□□□ -1.72
CIT1YNR001C CCM1P48237 864 aaPredicted RBP4.3□□□□□ -1.72
CIT1YNR001C AIM14P53109 570 aa4.3□□□□□ -1.72
CIT1YNR001C GUP2Q08929 609 aa4.3□□□□□ -1.72
CIT1YNR001C SVS1Q12254 260 aa4.3□□□□□ -1.72
CIT1YNR001C SNU66Q12420 587 aaPredicted RBP4.3□□□□□ -1.72
CIT1YNR001C MHP1P43638 1398 aa4.3□□□□□ -1.72
CIT1YNR001C ULS1Q08562 1619 aa4.3□□□□□ -1.72
CIT1YNR001C MSH1P25846 959 aa4.29□□□□□ -1.72
CIT1YNR001C CDC20P26309 610 aa4.29□□□□□ -1.72
CIT1YNR001C HEM12P32347 362 aaPredicted RBP4.29□□□□□ -1.72
CIT1YNR001C YKU70P32807 602 aa4.29□□□□□ -1.72
CIT1YNR001C PRS1P32895 427 aaKnown RBP4.29□□□□□ -1.72
CIT1YNR001C RRP8P38961 392 aaKnown RBP4.29□□□□□ -1.72
CIT1YNR001C SKY1Q03656 742 aa4.29□□□□□ -1.72
CIT1YNR001C ATG33Q06485 197 aa4.29□□□□□ -1.72
CIT1YNR001C GRC3Q07845 632 aa4.29□□□□□ -1.72
CIT1YNR001C PEX15Q08215 383 aa4.29□□□□□ -1.72
CIT1YNR001C YPR027CQ12079 277 aa4.29□□□□□ -1.72
CIT1YNR001C RPL11AP0C0W9 174 aaKnown RBP4.29□□□□□ -1.72
CIT1YNR001C DAL3P32459 195 aa4.29□□□□□ -1.72
CIT1YNR001C VTC2P43585 828 aa4.29□□□□□ -1.72
CIT1YNR001C YGR283CP53336 341 aaPredicted RBP4.29□□□□□ -1.72
CIT1YNR001C RSM24Q03976 319 aa4.29□□□□□ -1.72
CIT1YNR001C NHX1Q04121 633 aa4.29□□□□□ -1.72
CIT1YNR001C SXM1Q04175 944 aaKnown RBP4.29□□□□□ -1.72
CIT1YNR001C BLS1Q06071 122 aa4.29□□□□□ -1.72
CIT1YNR001C MET7Q08645 548 aa4.29□□□□□ -1.72
CIT1YNR001C VTS1Q08831 523 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
CIT1YNR001C YDR056CQ12025 205 aa4.29□□□□□ -1.72
CIT1YNR001C CLF1Q12309 687 aaPredicted RBP4.29□□□□□ -1.72
CIT1YNR001C RPL11BQ3E757 174 aaPredicted RBP4.29□□□□□ -1.72
CIT1YNR001C TRM3Q07527 1436 aa4.28□□□□□ -1.72
CIT1YNR001C TY1B-JR2P47100 1755 aaKnown RBP4.28□□□□□ -1.72
CIT1YNR001C TY1B-ER2Q03619 1755 aa4.28□□□□□ -1.72
CIT1YNR001C TY1B-MR1Q04214 1755 aa4.28□□□□□ -1.72
CIT1YNR001C TY1B-MR2Q04670 1755 aaKnown RBP4.28□□□□□ -1.72
CIT1YNR001C TY1B-LR1Q12088 1755 aaKnown RBP4.28□□□□□ -1.72
CIT1YNR001C TY1B-NL1Q12112 1755 aa4.28□□□□□ -1.72
CIT1YNR001C TY1B-GR1Q12141 1755 aa4.28□□□□□ -1.72
CIT1YNR001C TY1B-BLQ12490 1755 aa4.28□□□□□ -1.72
CIT1YNR001C HCA4P20448 770 aaKnown RBP4.28□□□□□ -1.72
CIT1YNR001C FUN30P31380 1131 aa4.28□□□□□ -1.72
CIT1YNR001C BEM3P32873 1128 aa4.28□□□□□ -1.72
CIT1YNR001C SLA2P33338 968 aa4.28□□□□□ -1.72
CIT1YNR001C LST4P34239 828 aa4.28□□□□□ -1.72
CIT1YNR001C RRN3P36070 627 aa4.28□□□□□ -1.72
CIT1YNR001C PPE1P38796 400 aa4.28□□□□□ -1.72
CIT1YNR001C RIX1P38883 763 aaPredicted RBP4.28□□□□□ -1.72
CIT1YNR001C MPT5P39016 859 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
CIT1YNR001C TOK1P40310 691 aa4.28□□□□□ -1.72
CIT1YNR001C QRI7P43122 407 aa4.28□□□□□ -1.72
CIT1YNR001C GYP8P43570 497 aa4.28□□□□□ -1.72
CIT1YNR001C RET2P43621 546 aa4.28□□□□□ -1.72
CIT1YNR001C BFA1P47113 574 aa4.28□□□□□ -1.72
CIT1YNR001C PTA1Q01329 785 aaPredicted RBP4.28□□□□□ -1.72
CIT1YNR001C MEH1Q02205 184 aa4.28□□□□□ -1.72
CIT1YNR001C ATP25Q03153 612 aa4.28□□□□□ -1.72
CIT1YNR001C SIZ1Q04195 904 aa4.28□□□□□ -1.72
CIT1YNR001C VIP1Q06685 1146 aaKnown RBP4.28□□□□□ -1.72
CIT1YNR001C MED1Q12321 566 aa4.28□□□□□ -1.72
CIT1YNR001C ENT1Q12518 454 aa4.28□□□□□ -1.72
CIT1YNR001C GEA1P47102 1408 aaPredicted RBP4.27□□□□□ -1.73
CIT1YNR001C SNQ2P32568 1501 aaKnown RBP4.27□□□□□ -1.73
CIT1YNR001C BI4P03879 638 aa4.27□□□□□ -1.73
CIT1YNR001C RPP0P05317 312 aaKnown RBP4.27□□□□□ -1.73
CIT1YNR001C SEC18P18759 758 aaKnown RBP4.27□□□□□ -1.73
CIT1YNR001C ACE2P21192 770 aa4.27□□□□□ -1.73
CIT1YNR001C MSM1P22438 575 aa4.27□□□□□ -1.73
CIT1YNR001C NPP1P25353 742 aa4.27□□□□□ -1.73
CIT1YNR001C PER1P25625 357 aa4.27□□□□□ -1.73
CIT1YNR001C CDC60P26637 1090 aaKnown RBP4.27□□□□□ -1.73
CIT1YNR001C APL1P27351 700 aa4.27□□□□□ -1.73
CIT1YNR001C PXA2P34230 853 aa4.27□□□□□ -1.73
CIT1YNR001C PEX5P35056 612 aa4.27□□□□□ -1.73
CIT1YNR001C EMC3P36039 253 aa4.27□□□□□ -1.73
CIT1YNR001C MCD4P36051 919 aa4.27□□□□□ -1.73
CIT1YNR001C UGA2P38067 497 aa4.27□□□□□ -1.73
CIT1YNR001C PSY4P38193 441 aa4.27□□□□□ -1.73
CIT1YNR001C RAD26P40352 1085 aa4.27□□□□□ -1.73
CIT1YNR001C GTR1Q00582 310 aa4.27□□□□□ -1.73
CIT1YNR001C YHM2Q04013 314 aa4.27□□□□□ -1.73
CIT1YNR001C HIM1Q06674 414 aa4.27□□□□□ -1.73
CIT1YNR001C YOR352WQ08816 343 aa4.27□□□□□ -1.73
CIT1YNR001C TY1B-DR3Q99231 1755 aa4.27□□□□□ -1.73
CIT1YNR001C MSS18P08593 268 aa4.26□□□□□ -1.73
CIT1YNR001C HMG1P12683 1054 aa4.26□□□□□ -1.73
CIT1YNR001C IMP2'P32351 346 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms