RNA–Protein interactions for RNA: YER172C-A

YER172C-A, Transcript of Dubious open reading frame, yeastyeast

Gene YER172C-A, Length 381 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YER172C-AYER172C-A NOP13P53883 403 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
YER172C-AYER172C-A ALF1P53904 254 aa2.18□□□□□ -2.06
YER172C-AYER172C-A ESBP6P53918 673 aa2.18□□□□□ -2.06
YER172C-AYER172C-A NCS2P53923 493 aaPredicted RBP2.18□□□□□ -2.06
YER172C-AYER172C-A RPA49Q01080 415 aaPredicted RBP2.18□□□□□ -2.06
YER172C-AYER172C-A SLD5Q03406 294 aa2.18□□□□□ -2.06
YER172C-AYER172C-A SPO71Q03868 1245 aa2.18□□□□□ -2.06
YER172C-AYER172C-A AIM33Q04516 312 aa2.18□□□□□ -2.06
YER172C-AYER172C-A YMR321CQ04898 105 aa2.18□□□□□ -2.06
YER172C-AYER172C-A DUS4Q06063 367 aa2.18□□□□□ -2.06
YER172C-AYER172C-A SMD2Q06217 110 aaKnown RBP2.18□□□□□ -2.06
YER172C-AYER172C-A YDL073WQ07454 984 aa2.18□□□□□ -2.06
YER172C-AYER172C-A CRD1Q07560 283 aa2.18□□□□□ -2.06
YER172C-AYER172C-A APC5Q08683 685 aa2.18□□□□□ -2.06
YER172C-AYER172C-A NEW1Q08972 1196 aaKnown RBP2.18□□□□□ -2.06
YER172C-AYER172C-A YPL277CQ08989 487 aa2.18□□□□□ -2.06
YER172C-AYER172C-A SGT2Q12118 346 aaKnown RBP2.18□□□□□ -2.06
YER172C-AYER172C-A SUT2Q12286 268 aa2.18□□□□□ -2.06
YER172C-AYER172C-A TY1A-NL1Q12391 440 aaKnown RBP2.18□□□□□ -2.06
YER172C-AYER172C-A GIS3Q12418 502 aa2.18□□□□□ -2.06
YER172C-AYER172C-A RTP1Q12751 981 aa2.18□□□□□ -2.06
YER172C-AYER172C-A SNF1P06782 633 aaKnown RBP2.17□□□□□ -2.06
YER172C-AYER172C-A PHO4P07270 312 aaKnown RBP2.17□□□□□ -2.06
YER172C-AYER172C-A SWI6P09959 803 aa2.17□□□□□ -2.06
YER172C-AYER172C-A SSB1P11484 613 aaKnown RBP2.17□□□□□ -2.06
YER172C-AYER172C-A ATE1P16639 503 aa2.17□□□□□ -2.06
YER172C-AYER172C-A PHO13P19881 312 aa2.17□□□□□ -2.06
YER172C-AYER172C-A DBP5P20449 482 aaKnown RBP2.17□□□□□ -2.06
YER172C-AYER172C-A NPR1P22211 790 aa2.17□□□□□ -2.06
YER172C-AYER172C-A SPO11P23179 398 aa2.17□□□□□ -2.06
YER172C-AYER172C-A RSC6P25632 483 aa2.17□□□□□ -2.06
YER172C-AYER172C-A TMT1P32643 299 aa2.17□□□□□ -2.06
YER172C-AYER172C-A RPT1P33299 467 aaKnown RBP2.17□□□□□ -2.06
YER172C-AYER172C-A DUR3P33413 735 aa2.17□□□□□ -2.06
YER172C-AYER172C-A UBP11P36026 717 aa2.17□□□□□ -2.06
YER172C-AYER172C-A PXL1P36166 706 aa2.17□□□□□ -2.06
YER172C-AYER172C-A MMS4P38257 691 aa2.17□□□□□ -2.06
YER172C-AYER172C-A YHL008CP38750 627 aa2.17□□□□□ -2.06
YER172C-AYER172C-A BUD16P39988 312 aa2.17□□□□□ -2.06
YER172C-AYER172C-A SSB2P40150 613 aaKnown RBP2.17□□□□□ -2.06
YER172C-AYER172C-A MMF1P40185 145 aaKnown RBP2.17□□□□□ -2.06
YER172C-AYER172C-A LSB6P42951 607 aa2.17□□□□□ -2.06
YER172C-AYER172C-A SPO74P45819 413 aa2.17□□□□□ -2.06
YER172C-AYER172C-A AIP1P46680 615 aaKnown RBP2.17□□□□□ -2.06
YER172C-AYER172C-A FYV8P46949 817 aaKnown RBP2.17□□□□□ -2.06
YER172C-AYER172C-A SAM37P50110 327 aa2.17□□□□□ -2.06
YER172C-AYER172C-A CUL3P53202 744 aa2.17□□□□□ -2.06
YER172C-AYER172C-A RTT102P53330 157 aa2.17□□□□□ -2.06
YER172C-AYER172C-A PGA2P53903 129 aa2.17□□□□□ -2.06
YER172C-AYER172C-A DAK1P54838 584 aaKnown RBP2.17□□□□□ -2.06
YER172C-AYER172C-A ULP1Q02724 621 aa2.17□□□□□ -2.06
YER172C-AYER172C-A YPL034WQ03083 165 aa2.17□□□□□ -2.06
YER172C-AYER172C-A HAS1Q03532 505 aaKnown RBP2.17□□□□□ -2.06
YER172C-AYER172C-A TSR1Q07381 788 aaKnown RBP2.17□□□□□ -2.06
YER172C-AYER172C-A IES4Q08561 116 aa2.17□□□□□ -2.06
YER172C-AYER172C-A MCA1Q08601 432 aa2.17□□□□□ -2.06
YER172C-AYER172C-A SPE3Q12074 293 aaKnown RBP2.17□□□□□ -2.06
YER172C-AYER172C-A YLL058WQ12198 575 aa2.17□□□□□ -2.06
YER172C-AYER172C-A CMR1Q12510 522 aaKnown RBP2.17□□□□□ -2.06
YER172C-AYER172C-A TUF1P02992 437 aaKnown RBP2.16□□□□□ -2.06
YER172C-AYER172C-A HTS1P07263 546 aaKnown RBP2.16□□□□□ -2.06
YER172C-AYER172C-A WHI2P12611 486 aa2.16□□□□□ -2.06
YER172C-AYER172C-A SEC23P15303 768 aaKnown RBP2.16□□□□□ -2.06
YER172C-AYER172C-A COX11P19516 300 aaKnown RBP2.16□□□□□ -2.06
YER172C-AYER172C-A ADE2P21264 571 aaKnown RBP2.16□□□□□ -2.06
YER172C-AYER172C-A CDC15P27636 974 aa2.16□□□□□ -2.06
YER172C-AYER172C-A NAM7P30771 971 aaKnown RBP2.16□□□□□ -2.06
YER172C-AYER172C-A MET4P32389 672 aa2.16□□□□□ -2.06
YER172C-AYER172C-A GCD6P32501 712 aaKnown RBP2.16□□□□□ -2.06
YER172C-AYER172C-A VPH1P32563 840 aaKnown RBP2.16□□□□□ -2.06
YER172C-AYER172C-A SAC6P32599 642 aaKnown RBP2.16□□□□□ -2.06
YER172C-AYER172C-A TRM2P33753 639 aa2.16□□□□□ -2.06
YER172C-AYER172C-A SHP1P34223 423 aa2.16□□□□□ -2.06
YER172C-AYER172C-A MAE1P36013 669 aaKnown RBP2.16□□□□□ -2.06
YER172C-AYER172C-A MIC60P36112 540 aa2.16□□□□□ -2.06
YER172C-AYER172C-A UIP5P36137 443 aa2.16□□□□□ -2.06
YER172C-AYER172C-A PET10P36139 283 aa2.16□□□□□ -2.06
YER172C-AYER172C-A ECM2P38241 364 aaKnown RBP2.16□□□□□ -2.06
YER172C-AYER172C-A YHR054CP38780 354 aa2.16□□□□□ -2.06
YER172C-AYER172C-A SMC2P38989 1170 aaKnown RBP2.16□□□□□ -2.06
YER172C-AYER172C-A EAF5P39995 279 aa2.16□□□□□ -2.06
YER172C-AYER172C-A NEO1P40527 1151 aa2.16□□□□□ -2.06
YER172C-AYER172C-A SKP2P42843 763 aa2.16□□□□□ -2.06
YER172C-AYER172C-A SCD6P45978 349 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
YER172C-AYER172C-A DAS1P47005 663 aa2.16□□□□□ -2.06
YER172C-AYER172C-A RPS7BP48164 190 aaKnown RBP2.16□□□□□ -2.06
YER172C-AYER172C-A CCM1P48237 864 aaPredicted RBP2.16□□□□□ -2.06
YER172C-AYER172C-A PSP2P50109 593 aaKnown RBP2.16□□□□□ -2.06
YER172C-AYER172C-A ALT2P52892 507 aa2.16□□□□□ -2.06
YER172C-AYER172C-A NUT1P53114 1132 aa2.16□□□□□ -2.06
YER172C-AYER172C-A VPS75P53853 264 aa2.16□□□□□ -2.06
YER172C-AYER172C-A YNL134CP53912 376 aaKnown RBP2.16□□□□□ -2.06
YER172C-AYER172C-A VTC3Q02725 835 aa2.16□□□□□ -2.06
YER172C-AYER172C-A EBS1Q03466 884 aaKnown RBP2.16□□□□□ -2.06
YER172C-AYER172C-A WAR1Q03631 944 aa2.16□□□□□ -2.06
YER172C-AYER172C-A GIR2Q03768 265 aaPredicted RBP2.16□□□□□ -2.06
YER172C-AYER172C-A YCS4Q06156 1176 aa2.16□□□□□ -2.06
YER172C-AYER172C-A SPP382Q06411 708 aaPredicted RBP2.16□□□□□ -2.06
YER172C-AYER172C-A SUE1Q06524 206 aa2.16□□□□□ -2.06
YER172C-AYER172C-A PMT7Q06644 662 aa2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 54 ms