RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO21	YDL140C	PNO1	Q99216	274 aa	Known RBP	3.98	□□□□□ -1.77
RPO21	YDL140C	GAL10	P04397	699 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	PDC6	P26263	563 aa	Known RBP	3.98	□□□□□ -1.77
RPO21	YDL140C	KTR1	P27810	393 aa	Known RBP	3.98	□□□□□ -1.77
RPO21	YDL140C	NFU1	P32860	256 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	PXA1	P41909	870 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	CCT7	P42943	550 aa	Known RBP	3.98	□□□□□ -1.77
RPO21	YDL140C	LYS5	P50113	272 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	MDM12	Q92328	271 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	SWI1	P09547	1314 aa		3.97	□□□□□ -1.77
RPO21	YDL140C	RPB10	P22139	70 aa		3.97	□□□□□ -1.77
RPO21	YDL140C	SUL1	P38359	859 aa		3.97	□□□□□ -1.77
RPO21	YDL140C	CRG1	P38892	291 aa	RIP-Chip data	3.97	□□□□□ -1.77	not detected
RPO21	YDL140C	PCF11	P39081	626 aa	Predicted RBP	3.97	□□□□□ -1.77
RPO21	YDL140C	SPF1	P39986	1215 aa	Known RBP	3.97	□□□□□ -1.77
RPO21	YDL140C	YNL193W	P53870	558 aa		3.97	□□□□□ -1.77
RPO21	YDL140C	RPN5	Q12250	445 aa	Known RBP	3.97	□□□□□ -1.77
RPO21	YDL140C	YOR093C	Q12275	1648 aa		3.97	□□□□□ -1.77
RPO21	YDL140C	HIS4	P00815	799 aa	Known RBP	3.97	□□□□□ -1.77
RPO21	YDL140C	YER152C	P10356	443 aa		3.97	□□□□□ -1.77
RPO21	YDL140C	CRM1	P30822	1084 aa	Known RBP	3.97	□□□□□ -1.77
RPO21	YDL140C	SWI3	P32591	825 aa		3.97	□□□□□ -1.77
RPO21	YDL140C	APT2	P36973	181 aa		3.97	□□□□□ -1.77
RPO21	YDL140C	CCT3	P39077	534 aa	Known RBP	3.97	□□□□□ -1.77
RPO21	YDL140C	LSB6	P42951	607 aa		3.97	□□□□□ -1.77
RPO21	YDL140C	APS3	P47064	194 aa		3.97	□□□□□ -1.77
RPO21	YDL140C	NMA2	P53204	395 aa		3.97	□□□□□ -1.77
RPO21	YDL140C	GPD1	Q00055	391 aa	Known RBP	3.97	□□□□□ -1.77
RPO21	YDL140C	EGD1	Q02642	157 aa	Known RBP	3.97	□□□□□ -1.77
RPO21	YDL140C	SRL4	Q03085	281 aa		3.97	□□□□□ -1.77
RPO21	YDL140C	ATP25	Q03153	612 aa		3.97	□□□□□ -1.77
RPO21	YDL140C	CLN3	P13365	580 aa		3.97	□□□□□ -1.77
RPO21	YDL140C	GPI10	P30777	616 aa		3.97	□□□□□ -1.77
RPO21	YDL140C	CDC3	P32457	520 aa	Known RBP	3.97	□□□□□ -1.77
RPO21	YDL140C	EHT1	P38295	451 aa		3.97	□□□□□ -1.77
RPO21	YDL140C	ARF3	P40994	183 aa	RIP-Chip data	3.97	□□□□□ -1.77	not detected
RPO21	YDL140C	CTH1	P47976	325 aa		3.97	□□□□□ -1.77
RPO21	YDL140C	FOL2	P51601	243 aa	Known RBP	3.97	□□□□□ -1.77
RPO21	YDL140C	GOR1	P53839	350 aa		3.97	□□□□□ -1.77
RPO21	YDL140C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	3.97	□□□□□ -1.77	not detected
RPO21	YDL140C	DBP10	Q12389	995 aa	Known RBP	3.97	□□□□□ -1.77
RPO21	YDL140C	TGL4	P36165	910 aa		3.97	□□□□□ -1.77
RPO21	YDL140C	SEC28	P40509	296 aa	Known RBP	3.97	□□□□□ -1.77
RPO21	YDL140C	SPC105	P53148	917 aa		3.97	□□□□□ -1.77
RPO21	YDL140C	RSA3	Q05942	220 aa	Known RBP	3.97	□□□□□ -1.77
RPO21	YDL140C	CIT2	P08679	460 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	UTR4	P32626	227 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	COG6	P53959	839 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	CSI1	Q04368	295 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	LDB17	Q12342	491 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	VCX1	Q99385	411 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	MET2	P08465	486 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	DAL81	P21657	970 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	RAM1	P22007	431 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	PET127	P32606	800 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	YKR075C	P36155	307 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	LAM1	P38851	1228 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	HXT8	P40886	569 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	PMT3	P47190	753 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	CBK1	P53894	756 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	YOL024W	Q08172	172 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	AI2	P03876	854 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	MIP1	P15801	1254 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	YIH1	P25637	258 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	BYE1	P36106	594 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	ILV3	P39522	585 aa	Known RBP	3.96	□□□□□ -1.78
RPO21	YDL140C	SIP4	P46954	829 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	YGR130C	P53278	816 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	ESF2	P53743	316 aa	Known RBP	3.96	□□□□□ -1.78
RPO21	YDL140C	RPM2	Q02773	1202 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	SEG1	Q04279	960 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	HDA3	Q06623	655 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	MDM20	Q12387	796 aa	Known RBP	3.96	□□□□□ -1.78
RPO21	YDL140C	PDR15	Q04182	1529 aa	Known RBP	3.96	□□□□□ -1.78
RPO21	YDL140C	RGR1	P19263	1082 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	3.96	□□□□□ -1.78	not detected
RPO21	YDL140C	ECM21	P38167	1117 aa	Known RBP	3.96	□□□□□ -1.78
RPO21	YDL140C	VPS70	P47161	811 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	YGR266W	P53326	701 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	BRE5	P53741	515 aa	Known RBP	3.96	□□□□□ -1.78
RPO21	YDL140C	PGA2	P53903	129 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	SFB2	P53953	876 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	TPP1	Q03796	238 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	TSA2	Q04120	196 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	SGO1	Q08490	590 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	YDR061W	Q12298	539 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	LYS2	P07702	1392 aa		3.96	□□□□□ -1.78
RPO21	YDL140C	HCM1	P25364	564 aa		3.95	□□□□□ -1.78
RPO21	YDL140C	MSH2	P25847	964 aa		3.95	□□□□□ -1.78
RPO21	YDL140C	SSH4	P32343	579 aa		3.95	□□□□□ -1.78
RPO21	YDL140C	HIS7	P33734	552 aa	Known RBP	3.95	□□□□□ -1.78
RPO21	YDL140C	RPF2	P36160	344 aa	Known RBP	3.95	□□□□□ -1.78
RPO21	YDL140C	MRX1	P40050	688 aa		3.95	□□□□□ -1.78
RPO21	YDL140C	PYK2	P52489	506 aa	Known RBP	3.95	□□□□□ -1.78
RPO21	YDL140C	YDR109C	Q04585	715 aa		3.95	□□□□□ -1.78
RPO21	YDL140C	YPR204W	Q08995	1032 aa		3.95	□□□□□ -1.78
RPO21	YDL140C	YRR1	Q12172	810 aa		3.95	□□□□□ -1.78
RPO21	YDL140C	SAC7	P17121	654 aa		3.95	□□□□□ -1.78
RPO21	YDL140C	TKL1	P23254	680 aa	Known RBP	3.95	□□□□□ -1.78
RPO21	YDL140C	SPS22	P25380	463 aa		3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms