RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 FMP52P40008 231 aa3.75□□□□□ -1.81
snR54snR54 UBC11P52492 156 aa3.75□□□□□ -1.81
snR54snR54 TEL2P53038 688 aa3.75□□□□□ -1.81
snR54snR54 MTL1P53214 551 aa3.75□□□□□ -1.81
snR54snR54 RIA1P53893 1110 aa3.75□□□□□ -1.81
snR54snR54 RGC1Q06108 1083 aaKnown RBP3.75□□□□□ -1.81
snR54snR54 SGO1Q08490 590 aa3.75□□□□□ -1.81
snR54snR54 MSL5Q12186 476 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
snR54snR54 MIH1P23748 554 aa3.74□□□□□ -1.81
snR54snR54 VBA3P25594 458 aa3.74□□□□□ -1.81
snR54snR54 YKR051WP36142 418 aa3.74□□□□□ -1.81
snR54snR54 TDP1P38319 544 aa3.74□□□□□ -1.81
snR54snR54 CBR1P38626 284 aaKnown RBP3.74□□□□□ -1.81
snR54snR54 YHR112CP38716 378 aa3.74□□□□□ -1.81
snR54snR54 ATF1P40353 525 aa3.74□□□□□ -1.81
snR54snR54 NUP82P40368 713 aa3.74□□□□□ -1.81
snR54snR54 BAP3P41815 604 aa3.74□□□□□ -1.81
snR54snR54 YFL052WP43551 465 aa3.74□□□□□ -1.81
snR54snR54 YBP2P53169 641 aa3.74□□□□□ -1.81
snR54snR54 LGE1Q02796 332 aaKnown RBP3.74□□□□□ -1.81
snR54snR54 ATG11Q12527 1178 aa3.74□□□□□ -1.81
snR54snR54 MDM12Q92328 271 aa3.74□□□□□ -1.81
snR54snR54 STO1P34160 861 aaKnown RBP3.73□□□□□ -1.81
snR54snR54 FMO1P38866 432 aa3.73□□□□□ -1.81
snR54snR54 LYS9P38999 446 aa3.73□□□□□ -1.81
snR54snR54 BNA2P47125 453 aa3.73□□□□□ -1.81
snR54snR54 NPY1P53164 384 aa3.73□□□□□ -1.81
snR54snR54 PHO8P11491 566 aa3.72□□□□□ -1.81
snR54snR54 KIN3P22209 435 aa3.72□□□□□ -1.81
snR54snR54 ERG6P25087 383 aaKnown RBP3.72□□□□□ -1.81
snR54snR54 PEX2P32800 271 aa3.72□□□□□ -1.81
snR54snR54 RPN10P38886 268 aaKnown RBP3.72□□□□□ -1.81
snR54snR54 CCT3P39077 534 aaKnown RBP3.72□□□□□ -1.81
snR54snR54 ECM1P39715 212 aa3.72□□□□□ -1.81
snR54snR54 CAF16P43569 289 aa3.72□□□□□ -1.81
snR54snR54 PAN2P53010 1115 aaPredicted RBP3.72□□□□□ -1.81
snR54snR54 VPS73P53142 486 aaKnown RBP3.72□□□□□ -1.81
snR54snR54 ORC4P54791 529 aa3.72□□□□□ -1.81
snR54snR54 SSL2Q00578 843 aa3.72□□□□□ -1.81
snR54snR54 SNP1Q00916 300 aaPredicted RBP3.72□□□□□ -1.81
snR54snR54 ARG5,6Q01217 863 aa3.72□□□□□ -1.81
snR54snR54 HRP1Q99383 534 aaKnown RBP3.72□□□□□ -1.81
snR54snR54 MVD1P32377 396 aaKnown RBP3.71□□□□□ -1.82
snR54snR54 APL2P36000 726 aaPredicted RBP3.71□□□□□ -1.82
snR54snR54 MIP6P38760 659 aaKnown RBP3.71□□□□□ -1.82
snR54snR54 SFB3P38810 929 aa3.71□□□□□ -1.82
snR54snR54 HRB1P38922 454 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82not detected
snR54snR54 UBC9P50623 157 aaPredicted RBP3.71□□□□□ -1.82
snR54snR54 SMX3P54999 86 aaPredicted RBP3.71□□□□□ -1.82
snR54snR54 YLR125WQ12138 136 aa3.71□□□□□ -1.82
snR54snR54 BNR1P40450 1375 aa3.71□□□□□ -1.82
snR54snR54 SIR3P06701 978 aa3.7□□□□□ -1.82
snR54snR54 SRD1P09007 221 aa3.7□□□□□ -1.82
snR54snR54 GFA1P14742 717 aaKnown RBP3.7□□□□□ -1.82
snR54snR54 GSY1P23337 708 aa3.7□□□□□ -1.82
snR54snR54 THI4P32318 326 aa3.7□□□□□ -1.82
snR54snR54 CUE2P36075 443 aaKnown RBP3.7□□□□□ -1.82
snR54snR54 REV7P38927 245 aa3.7□□□□□ -1.82
snR54snR54 CCT7P42943 550 aaKnown RBP3.7□□□□□ -1.82
snR54snR54 TAH11P47112 604 aa3.7□□□□□ -1.82
snR54snR54 ARP4P80428 489 aa3.7□□□□□ -1.82
snR54snR54 CTK1Q03957 528 aaKnown RBP3.7□□□□□ -1.82
snR54snR54 RPN7Q06103 429 aaKnown RBP3.7□□□□□ -1.82
snR54snR54 YKL033W-AQ86ZR7 236 aa3.7□□□□□ -1.82
snR54snR54 MET6P05694 767 aaKnown RBP3.69□□□□□ -1.82
snR54snR54 CIT2P08679 460 aa3.69□□□□□ -1.82
snR54snR54 RAD18P10862 487 aa3.69□□□□□ -1.82
snR54snR54 PYC1P11154 1178 aaKnown RBP3.69□□□□□ -1.82
snR54snR54 CDC43P18898 376 aa3.69□□□□□ -1.82
snR54snR54 HOG1P32485 435 aa3.69□□□□□ -1.82
snR54snR54 PPZ2P33329 710 aa3.69□□□□□ -1.82
snR54snR54 TRZ1P36159 838 aaPredicted RBP3.69□□□□□ -1.82
snR54snR54 NUP60P39705 539 aa3.69□□□□□ -1.82
snR54snR54 GET2P40056 285 aa3.69□□□□□ -1.82
snR54snR54 LEE1Q02799 301 aaKnown RBP3.69□□□□□ -1.82
snR54snR54 NHX1Q04121 633 aa3.69□□□□□ -1.82
snR54snR54 MCM21Q06675 368 aa3.69□□□□□ -1.82
snR54snR54 RNR1P21524 888 aaKnown RBP3.68□□□□□ -1.82
snR54snR54 MSH2P25847 964 aa3.68□□□□□ -1.82
snR54snR54 PHO11P35842 467 aa3.68□□□□□ -1.82
snR54snR54 HSL7P38274 827 aa3.68□□□□□ -1.82
snR54snR54 PHO12P38693 467 aa3.68□□□□□ -1.82
snR54snR54 YJL206CP39529 758 aa3.68□□□□□ -1.82
snR54snR54 NDC80P40460 691 aa3.68□□□□□ -1.82
snR54snR54 PCL10P53124 433 aa3.68□□□□□ -1.82
snR54snR54 HCA4P20448 770 aaKnown RBP3.67□□□□□ -1.82
snR54snR54 PEX6P33760 1030 aa3.67□□□□□ -1.82
snR54snR54 YKR018CP36114 725 aa3.67□□□□□ -1.82
snR54snR54 FLO10P36170 1169 aa3.67□□□□□ -1.82
snR54snR54 APT2P36973 181 aa3.67□□□□□ -1.82
snR54snR54 UBS1P38290 277 aa3.67□□□□□ -1.82
snR54snR54 YNL195CP40168 261 aa3.67□□□□□ -1.82
snR54snR54 AIM14P53109 570 aa3.67□□□□□ -1.82
snR54snR54 YAP1802P53309 568 aa3.67□□□□□ -1.82
snR54snR54 HMO1Q03973 246 aaKnown RBP3.67□□□□□ -1.82
snR54snR54 MLH3Q12083 715 aa3.67□□□□□ -1.82
snR54snR54 HMG1P12683 1054 aa3.66□□□□□ -1.82
snR54snR54 RIX1P38883 763 aaPredicted RBP3.66□□□□□ -1.82
snR54snR54 COX18P53239 316 aa3.66□□□□□ -1.82
snR54snR54 FHN1P53279 174 aa3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms