RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C CSG2P35206 410 aa9.09□□□□□ -0.95
RPD3YNL330C NPP2P39997 493 aa9.09□□□□□ -0.95
RPD3YNL330C ASG1P40467 964 aa9.09□□□□□ -0.95
RPD3YNL330C ZIP2P53061 704 aa9.09□□□□□ -0.95
RPD3YNL330C ATG1P53104 897 aa9.09□□□□□ -0.95
RPD3YNL330C ATG20Q07528 640 aa9.09□□□□□ -0.95
RPD3YNL330C TY4A-HQ6Q5P6 413 aa9.09□□□□□ -0.95
RPD3YNL330C ADE3P07245 946 aaKnown RBP9.08□□□□□ -0.96
RPD3YNL330C ILV2P07342 687 aaKnown RBP9.08□□□□□ -0.96
RPD3YNL330C SAM1P10659 382 aaKnown RBP9.08□□□□□ -0.96
RPD3YNL330C PER1P25625 357 aa9.08□□□□□ -0.96
RPD3YNL330C CDC48P25694 835 aaKnown RBP9.08□□□□□ -0.96
RPD3YNL330C CDC11P32458 415 aa9.08□□□□□ -0.96
RPD3YNL330C SWI3P32591 825 aa9.08□□□□□ -0.96
RPD3YNL330C GLC3P32775 704 aa9.08□□□□□ -0.96
RPD3YNL330C MRX3P38172 270 aa9.08□□□□□ -0.96
RPD3YNL330C POP4P38336 279 aa9.08□□□□□ -0.96
RPD3YNL330C ERC1P38767 581 aa9.08□□□□□ -0.96
RPD3YNL330C HSH155P49955 971 aaKnown RBP9.08□□□□□ -0.96
RPD3YNL330C YGR117CP53270 476 aa9.08□□□□□ -0.96
RPD3YNL330C SHE9Q04172 456 aa9.08□□□□□ -0.96
RPD3YNL330C RGA2Q06407 1009 aa9.08□□□□□ -0.96
RPD3YNL330C MAG2Q06436 670 aaKnown RBP9.08□□□□□ -0.96
RPD3YNL330C NOC3Q07896 663 aaPredicted RBP9.08□□□□□ -0.96
RPD3YNL330C SMC5Q08204 1093 aa9.08□□□□□ -0.96
RPD3YNL330C MPC54Q08550 464 aa9.08□□□□□ -0.96
RPD3YNL330C SEC39Q12745 709 aa9.08□□□□□ -0.96
RPD3YNL330C HEM15P16622 393 aa9.07□□□□□ -0.96
RPD3YNL330C CBF1P17106 351 aa9.07□□□□□ -0.96
RPD3YNL330C MCR1P36060 302 aaKnown RBP9.07□□□□□ -0.96
RPD3YNL330C PHO86P46956 311 aa9.07□□□□□ -0.96
RPD3YNL330C TMA22P47089 198 aaPredicted RBP9.07□□□□□ -0.96
RPD3YNL330C CPR7P47103 393 aa9.07□□□□□ -0.96
RPD3YNL330C YGL039WP53183 348 aaKnown RBP9.07□□□□□ -0.96
RPD3YNL330C DRN1P53255 507 aaKnown RBP9.07□□□□□ -0.96
RPD3YNL330C TBF1Q02457 562 aa9.07□□□□□ -0.96
RPD3YNL330C YMR027WQ04371 470 aa9.07□□□□□ -0.96
RPD3YNL330C UFO1Q04511 668 aa9.07□□□□□ -0.96
RPD3YNL330C IWR1Q07532 353 aaPredicted RBP9.07□□□□□ -0.96
RPD3YNL330C ISA1Q07821 250 aaPredicted RBP9.07□□□□□ -0.96
RPD3YNL330C VHS3Q08438 674 aa9.07□□□□□ -0.96
RPD3YNL330C PUS1Q12211 544 aaKnown RBP9.07□□□□□ -0.96
RPD3YNL330C THS1P04801 734 aaKnown RBP9.06□□□□□ -0.96
RPD3YNL330C TUB3P09734 445 aaKnown RBP9.06□□□□□ -0.96
RPD3YNL330C PDR1P12383 1068 aa9.06□□□□□ -0.96
RPD3YNL330C GPI10P30777 616 aa9.06□□□□□ -0.96
RPD3YNL330C CBF2P32504 956 aa9.06□□□□□ -0.96
RPD3YNL330C TRM2P33753 639 aa9.06□□□□□ -0.96
RPD3YNL330C SIC1P38634 284 aa9.06□□□□□ -0.96
RPD3YNL330C DYS1P38791 387 aa9.06□□□□□ -0.96
RPD3YNL330C HMF1P40037 129 aaKnown RBP9.06□□□□□ -0.96
RPD3YNL330C FTR1P40088 404 aa9.06□□□□□ -0.96
RPD3YNL330C VPS53P47061 822 aa9.06□□□□□ -0.96
RPD3YNL330C INP52P50942 1183 aa9.06□□□□□ -0.96
RPD3YNL330C YML6P51998 286 aa9.06□□□□□ -0.96
RPD3YNL330C SHE10P53075 577 aa9.06□□□□□ -0.96
RPD3YNL330C COG6P53959 839 aa9.06□□□□□ -0.96
RPD3YNL330C ROD1Q02805 837 aa9.06□□□□□ -0.96
RPD3YNL330C TFB2Q02939 513 aa9.06□□□□□ -0.96
RPD3YNL330C YPL109CQ02981 657 aa9.06□□□□□ -0.96
RPD3YNL330C STE20Q03497 939 aaKnown RBP9.06□□□□□ -0.96
RPD3YNL330C CEF1Q03654 590 aaPredicted RBP9.06□□□□□ -0.96
RPD3YNL330C PPM1Q04081 328 aa9.06□□□□□ -0.96
RPD3YNL330C DUS4Q06063 367 aa9.06□□□□□ -0.96
RPD3YNL330C YLR177WQ06251 628 aa9.06□□□□□ -0.96
RPD3YNL330C OSW2Q12202 724 aa9.06□□□□□ -0.96
RPD3YNL330C NAT1P12945 854 aaKnown RBP9.05□□□□□ -0.96
RPD3YNL330C BAS1P22035 811 aa9.05□□□□□ -0.96
RPD3YNL330C VMA4P22203 233 aaKnown RBP9.05□□□□□ -0.96
RPD3YNL330C MVD1P32377 396 aaKnown RBP9.05□□□□□ -0.96
RPD3YNL330C ABD1P32783 436 aaPredicted RBP9.05□□□□□ -0.96
RPD3YNL330C MRE11P32829 692 aa9.05□□□□□ -0.96
RPD3YNL330C AVT1P47082 602 aa9.05□□□□□ -0.96
RPD3YNL330C RTT102P53330 157 aa9.05□□□□□ -0.96
RPD3YNL330C NOG2P53742 486 aaKnown RBP9.05□□□□□ -0.96
RPD3YNL330C PRP3Q03338 469 aaPredicted RBP9.05□□□□□ -0.96
RPD3YNL330C MSH6Q03834 1242 aa9.05□□□□□ -0.96
RPD3YNL330C IVY1Q04934 453 aa9.05□□□□□ -0.96
RPD3YNL330C LCB5Q06147 687 aaKnown RBP9.05□□□□□ -0.96
RPD3YNL330C ALR1Q08269 859 aa9.05□□□□□ -0.96
RPD3YNL330C AI5_BETAQ9ZZX0 354 aa9.05□□□□□ -0.96
RPD3YNL330C CMD1P06787 147 aaKnown RBP9.05□□□□□ -0.96
RPD3YNL330C GAP1P19145 602 aaPredicted RBP9.05□□□□□ -0.96
RPD3YNL330C RNR1P21524 888 aaKnown RBP9.05□□□□□ -0.96
RPD3YNL330C AEP2P22136 580 aa9.05□□□□□ -0.96
RPD3YNL330C PTC3P34221 468 aaKnown RBP9.05□□□□□ -0.96
RPD3YNL330C SET3P36124 751 aa9.05□□□□□ -0.96
RPD3YNL330C PCA1P38360 1216 aa9.05□□□□□ -0.96
RPD3YNL330C AIM21P40563 679 aa9.05□□□□□ -0.96
RPD3YNL330C RGD2P43556 714 aa9.05□□□□□ -0.96
RPD3YNL330C DAS1P47005 663 aa9.05□□□□□ -0.96
RPD3YNL330C UBP15P50101 1230 aa9.05□□□□□ -0.96
RPD3YNL330C DUS3Q06053 668 aaKnown RBP9.05□□□□□ -0.96
RPD3YNL330C TDA5Q06417 326 aaKnown RBP9.05□□□□□ -0.96
RPD3YNL330C UBX5Q06682 500 aa9.05□□□□□ -0.96
RPD3YNL330C IES4Q08561 116 aa9.05□□□□□ -0.96
RPD3YNL330C NCR1Q12200 1170 aa9.05□□□□□ -0.96
RPD3YNL330C GIS3Q12418 502 aa9.05□□□□□ -0.96
RPD3YNL330C CSR2Q12734 1121 aa9.05□□□□□ -0.96
RPD3YNL330C CDC42P19073 191 aa9.04□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms