RNA–Protein interactions for RNA: YJL092W

SRS2, Transcript of DNA helicase and DNA-dependent ATPase, yeast

Gene SRS2, Length 3,525 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRS2	YJL092W	EAR1	Q03212	550 aa		4.59	□□□□□ -1.67
SRS2	YJL092W	YLH47	Q06493	454 aa		4.59	□□□□□ -1.67
SRS2	YJL092W	TUF1	P02992	437 aa	Known RBP	4.59	□□□□□ -1.67
SRS2	YJL092W	TFB1	P32776	642 aa		4.59	□□□□□ -1.67
SRS2	YJL092W	REC104	P33323	182 aa		4.59	□□□□□ -1.67
SRS2	YJL092W	APM3	P38153	483 aa		4.59	□□□□□ -1.67
SRS2	YJL092W	IFA38	P38286	347 aa		4.59	□□□□□ -1.67
SRS2	YJL092W	YLF2	P38746	405 aa		4.59	□□□□□ -1.67
SRS2	YJL092W	ARH1	P48360	493 aa		4.59	□□□□□ -1.67
SRS2	YJL092W	BNI4	P53858	892 aa		4.59	□□□□□ -1.67
SRS2	YJL092W	MRPL13	Q02204	264 aa		4.59	□□□□□ -1.67
SRS2	YJL092W	RNH1	Q04740	348 aa		4.59	□□□□□ -1.67
SRS2	YJL092W	MFB1	Q04922	465 aa		4.59	□□□□□ -1.67
SRS2	YJL092W	IOC2	Q12072	812 aa		4.59	□□□□□ -1.67
SRS2	YJL092W	PMS1	P14242	873 aa		4.59	□□□□□ -1.68
SRS2	YJL092W	PER1	P25625	357 aa		4.59	□□□□□ -1.68
SRS2	YJL092W	YKL151C	P36059	337 aa		4.59	□□□□□ -1.68
SRS2	YJL092W	YRO2	P38079	344 aa		4.59	□□□□□ -1.68
SRS2	YJL092W	RGD1	P38339	666 aa		4.59	□□□□□ -1.68
SRS2	YJL092W	GCD10	P41814	478 aa		4.59	□□□□□ -1.68
SRS2	YJL092W	SLS1	P42900	643 aa		4.59	□□□□□ -1.68
SRS2	YJL092W	SPO74	P45819	413 aa		4.59	□□□□□ -1.68
SRS2	YJL092W	DAM1	P53267	343 aa		4.59	□□□□□ -1.68
SRS2	YJL092W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.68	not detected
SRS2	YJL092W	TIM50	Q02776	476 aa		4.59	□□□□□ -1.68
SRS2	YJL092W	ARP9	Q05123	467 aa		4.59	□□□□□ -1.68
SRS2	YJL092W	PUS5	Q06244	254 aa		4.59	□□□□□ -1.68
SRS2	YJL092W	GYP1	Q08484	637 aa		4.59	□□□□□ -1.68
SRS2	YJL092W	NUR1	Q12066	484 aa		4.59	□□□□□ -1.68
SRS2	YJL092W	LEU2	P04173	364 aa	Predicted RBP	4.58	□□□□□ -1.68
SRS2	YJL092W	HTS1	P07263	546 aa	Known RBP	4.58	□□□□□ -1.68
SRS2	YJL092W	ROX1	P25042	368 aa		4.58	□□□□□ -1.68
SRS2	YJL092W	SEC21	P32074	935 aa	Known RBP	4.58	□□□□□ -1.68
SRS2	YJL092W	STE13	P33894	931 aa		4.58	□□□□□ -1.68
SRS2	YJL092W	VRP1	P37370	817 aa		4.58	□□□□□ -1.68
SRS2	YJL092W	EAF5	P39995	279 aa		4.58	□□□□□ -1.68
SRS2	YJL092W	YJL068C	P40363	299 aa		4.58	□□□□□ -1.68
SRS2	YJL092W	YIL092W	P40497	633 aa		4.58	□□□□□ -1.68
SRS2	YJL092W	CTF18	P49956	741 aa		4.58	□□□□□ -1.68
SRS2	YJL092W	UBC9	P50623	157 aa	Predicted RBP	4.58	□□□□□ -1.68
SRS2	YJL092W	PIL1	P53252	339 aa	Known RBP	4.58	□□□□□ -1.68
SRS2	YJL092W	UTP22	P53254	1237 aa	Predicted RBP	4.58	□□□□□ -1.68
SRS2	YJL092W	CBK1	P53894	756 aa		4.58	□□□□□ -1.68
SRS2	YJL092W	SRC1	Q03707	834 aa		4.58	□□□□□ -1.68
SRS2	YJL092W	RKM2	Q03942	479 aa		4.58	□□□□□ -1.68
SRS2	YJL092W	YHM2	Q04013	314 aa		4.58	□□□□□ -1.68
SRS2	YJL092W	APL5	Q08951	932 aa	Known RBP	4.58	□□□□□ -1.68
SRS2	YJL092W	HAL9	Q12180	1030 aa		4.58	□□□□□ -1.68
SRS2	YJL092W	TY1A-DR3	Q12441	440 aa		4.58	□□□□□ -1.68
SRS2	YJL092W	ADE8	P04161	214 aa		4.58	□□□□□ -1.68
SRS2	YJL092W	FUM1	P08417	488 aa	Known RBP	4.58	□□□□□ -1.68
SRS2	YJL092W	SRO9	P25567	434 aa	Known RBP	4.58	□□□□□ -1.68
SRS2	YJL092W	CNS1	P33313	385 aa		4.58	□□□□□ -1.68
SRS2	YJL092W	ALG3	P38179	458 aa		4.58	□□□□□ -1.68
SRS2	YJL092W	YNL035C	P53962	389 aa	Known RBP	4.58	□□□□□ -1.68
SRS2	YJL092W	RSC2	Q06488	889 aa		4.58	□□□□□ -1.68
SRS2	YJL092W	MET17	P06106	444 aa		4.58	□□□□□ -1.68
SRS2	YJL092W	ADH4	P10127	382 aa		4.58	□□□□□ -1.68
SRS2	YJL092W	FUS1	P11710	512 aa		4.58	□□□□□ -1.68
SRS2	YJL092W	CMP2	P14747	604 aa		4.58	□□□□□ -1.68
SRS2	YJL092W	MSN5	P52918	1224 aa		4.58	□□□□□ -1.68
SRS2	YJL092W	ALF1	P53904	254 aa		4.58	□□□□□ -1.68
SRS2	YJL092W	VPS9	P54787	451 aa		4.58	□□□□□ -1.68
SRS2	YJL092W	PTA1	Q01329	785 aa	Predicted RBP	4.58	□□□□□ -1.68
SRS2	YJL092W	PHO3	P24031	467 aa		4.57	□□□□□ -1.68
SRS2	YJL092W	SGF29	P25554	259 aa		4.57	□□□□□ -1.68
SRS2	YJL092W	SWI6	P09959	803 aa		4.57	□□□□□ -1.68
SRS2	YJL092W	CDC26	P14724	124 aa		4.57	□□□□□ -1.68
SRS2	YJL092W	DLD3	P39976	496 aa	Known RBP	4.57	□□□□□ -1.68
SRS2	YJL092W	IRC5	P43610	853 aa		4.57	□□□□□ -1.68
SRS2	YJL092W	POL31	P46957	487 aa		4.57	□□□□□ -1.68
SRS2	YJL092W	YJL055W	P47044	245 aa		4.57	□□□□□ -1.68
SRS2	YJL092W	KEL3	Q08979	651 aa	Predicted RBP	4.57	□□□□□ -1.68
SRS2	YJL092W	DCS2	Q12123	353 aa		4.57	□□□□□ -1.68
SRS2	YJL092W	RPL11A	P0C0W9	174 aa	Known RBP	4.56	□□□□□ -1.68
SRS2	YJL092W	HCA4	P20448	770 aa	Known RBP	4.56	□□□□□ -1.68
SRS2	YJL092W	DBF4	P32325	704 aa		4.56	□□□□□ -1.68
SRS2	YJL092W	TFA2	P36145	328 aa		4.56	□□□□□ -1.68
SRS2	YJL092W	OCA1	P50946	238 aa	Predicted RBP	4.56	□□□□□ -1.68
SRS2	YJL092W	WSC3	Q12215	556 aa		4.56	□□□□□ -1.68
SRS2	YJL092W	RPL11B	Q3E757	174 aa	Predicted RBP	4.56	□□□□□ -1.68
SRS2	YJL092W	SES1	P07284	462 aa	Known RBP	4.56	□□□□□ -1.68
SRS2	YJL092W	TRX1	P22217	103 aa	Known RBP	4.56	□□□□□ -1.68
SRS2	YJL092W	PDC6	P26263	563 aa	Known RBP	4.56	□□□□□ -1.68
SRS2	YJL092W	UGA3	P26370	528 aa		4.56	□□□□□ -1.68
SRS2	YJL092W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
SRS2	YJL092W	YKL077W	P36081	392 aa		4.56	□□□□□ -1.68
SRS2	YJL092W	YER156C	P40093	338 aa	Known RBP	4.56	□□□□□ -1.68
SRS2	YJL092W	VNX1	P42839	908 aa		4.56	□□□□□ -1.68
SRS2	YJL092W	SKP2	P42843	763 aa		4.56	□□□□□ -1.68
SRS2	YJL092W	FDC1	Q03034	503 aa		4.56	□□□□□ -1.68
SRS2	YJL092W	RRP7	P25368	297 aa	Predicted RBP	4.56	□□□□□ -1.68
SRS2	YJL092W	IME2	P32581	645 aa		4.56	□□□□□ -1.68
SRS2	YJL092W	PCL7	P40186	285 aa		4.56	□□□□□ -1.68
SRS2	YJL092W	NAS2	P40555	220 aa		4.56	□□□□□ -1.68
SRS2	YJL092W	SIP4	P46954	829 aa		4.56	□□□□□ -1.68
SRS2	YJL092W	BNA2	P47125	453 aa		4.56	□□□□□ -1.68
SRS2	YJL092W	RAD33	Q04231	177 aa		4.56	□□□□□ -1.68
SRS2	YJL092W	YCG1	Q06680	1035 aa		4.56	□□□□□ -1.68
SRS2	YJL092W	CWC2	Q12046	339 aa	Predicted RBP	4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 52.1 ms