RNA–Protein interactions for RNA: YJL092W

SRS2, Transcript of DNA helicase and DNA-dependent ATPase, yeast

Gene SRS2, Length 3,525 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRS2	YJL092W	DRS1	P32892	752 aa	Known RBP	8.93	□□□□□ -0.98
SRS2	YJL092W	TFA1	P36100	482 aa		8.38	□□□□□ -1.07
SRS2	YJL092W	BFR2	Q06631	534 aa	Known RBP	8.11	□□□□□ -1.11
SRS2	YJL092W	MTC1	P47018	478 aa	Known RBP	8.02	□□□□□ -1.13
SRS2	YJL092W	RQC2	Q12532	1038 aa	Known RBP	7.88	□□□□□ -1.15
SRS2	YJL092W	TAF7	Q05021	590 aa		7.72	□□□□□ -1.17
SRS2	YJL092W	AVT3	P36062	692 aa		7.56	□□□□□ -1.2
SRS2	YJL092W	DIP2	Q12220	943 aa	Predicted RBP	7.32	□□□□□ -1.24
SRS2	YJL092W	DMA1	P38823	416 aa		7.23	□□□□□ -1.25
SRS2	YJL092W	LEO1	P38439	464 aa		7.13	□□□□□ -1.27
SRS2	YJL092W	LEU3	P08638	886 aa		6.72	□□□□□ -1.33
SRS2	YJL092W	SAS10	Q12136	610 aa	Predicted RBP	6.64	□□□□□ -1.35
SRS2	YJL092W	PTP3	P40048	928 aa		6.63	□□□□□ -1.35
SRS2	YJL092W	RSE1	Q04693	1361 aa	Known RBP	6.6	□□□□□ -1.35
SRS2	YJL092W	ABP1	P15891	592 aa	Known RBP	6.59	□□□□□ -1.35
SRS2	YJL092W	DMA2	P53924	522 aa		6.55	□□□□□ -1.36
SRS2	YJL092W	IFH1	P39520	1085 aa		6.5	□□□□□ -1.37
SRS2	YJL092W	SSP1	P38871	571 aa		6.44	□□□□□ -1.38
SRS2	YJL092W	RLF2	Q12495	606 aa		6.42	□□□□□ -1.38
SRS2	YJL092W	RPN1	P38764	993 aa	Known RBP	6.41	□□□□□ -1.38
SRS2	YJL092W	NAP1	P25293	417 aa	Known RBP	6.37	□□□□□ -1.39
SRS2	YJL092W	RIM101	P33400	625 aa		6.37	□□□□□ -1.39
SRS2	YJL092W	ORC1	P54784	914 aa	Predicted RBP	6.34	□□□□□ -1.39
SRS2	YJL092W	IOC4	Q04213	475 aa		6.33	□□□□□ -1.4
SRS2	YJL092W	RPL17A	P05740	184 aa	Known RBP	6.3	□□□□□ -1.4
SRS2	YJL092W	RPL17B	P46990	184 aa	Known RBP	6.3	□□□□□ -1.4
SRS2	YJL092W	AIM44	Q99299	758 aa		6.28	□□□□□ -1.4
SRS2	YJL092W	SPT21	P35209	758 aa		6.27	□□□□□ -1.41
SRS2	YJL092W	CKB1	P43639	278 aa		6.27	□□□□□ -1.41
SRS2	YJL092W	OXP1	P28273	1286 aa		6.22	□□□□□ -1.41
SRS2	YJL092W	ISW2	Q08773	1120 aa		6.22	□□□□□ -1.41
SRS2	YJL092W	YLR271W	Q06152	274 aa		6.19	□□□□□ -1.42
SRS2	YJL092W	RPG1	P38249	964 aa	Known RBP	6.16	□□□□□ -1.42
SRS2	YJL092W	NOP8	Q08287	484 aa	Predicted RBP	6.16	□□□□□ -1.42
SRS2	YJL092W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	6.15	□□□□□ -1.42	not detected
SRS2	YJL092W	YML020W	Q03722	664 aa		6.13	□□□□□ -1.43
SRS2	YJL092W	MGA2	P40578	1113 aa		6.12	□□□□□ -1.43
SRS2	YJL092W	YAH1	Q12184	172 aa	Known RBP	6.12	□□□□□ -1.43
SRS2	YJL092W	REB1	P21538	810 aa		6.08	□□□□□ -1.44
SRS2	YJL092W	SPB4	P25808	606 aa	Predicted RBP	6.08	□□□□□ -1.44
SRS2	YJL092W	YPR148C	Q06523	435 aa		6.08	□□□□□ -1.44
SRS2	YJL092W	CST9	Q06032	482 aa		6.05	□□□□□ -1.44
SRS2	YJL092W	KIN1	P13185	1064 aa		6.05	□□□□□ -1.44
SRS2	YJL092W	URN1	Q06525	465 aa	Known RBP	6.03	□□□□□ -1.44
SRS2	YJL092W	DSF2	P38213	736 aa		6.02	□□□□□ -1.45
SRS2	YJL092W	SLX8	P40072	274 aa		6.02	□□□□□ -1.45
SRS2	YJL092W	VPS70	P47161	811 aa		5.99	□□□□□ -1.45
SRS2	YJL092W	YNR021W	P53723	404 aa	Known RBP	5.99	□□□□□ -1.45
SRS2	YJL092W	SET1	P38827	1080 aa	Known RBP	5.99	□□□□□ -1.45
SRS2	YJL092W	RAM2	P29703	316 aa		5.96	□□□□□ -1.46
SRS2	YJL092W	YIL055C	P40523	627 aa	Known RBP	5.96	□□□□□ -1.46
SRS2	YJL092W	MAM3	Q12296	706 aa		5.96	□□□□□ -1.46
SRS2	YJL092W	GEF1	P37020	779 aa		5.95	□□□□□ -1.46
SRS2	YJL092W	GUA1	P38625	525 aa	Known RBP	5.95	□□□□□ -1.46
SRS2	YJL092W	AIM7	Q12156	149 aa		5.94	□□□□□ -1.46
SRS2	YJL092W	SSA1	P10591	642 aa	Known RBP	5.94	□□□□□ -1.46
SRS2	YJL092W	RSM7	P47150	247 aa		5.94	□□□□□ -1.46
SRS2	YJL092W	SUB2	Q07478	446 aa	Known RBP	5.94	□□□□□ -1.46
SRS2	YJL092W	MRX12	P47084	519 aa		5.94	□□□□□ -1.46
SRS2	YJL092W	PSD2	P53037	1138 aa	Known RBP	5.93	□□□□□ -1.46
SRS2	YJL092W	PRI1	P10363	409 aa		5.93	□□□□□ -1.46
SRS2	YJL092W	TOP1	P04786	769 aa		5.92	□□□□□ -1.46
SRS2	YJL092W	HGH1	P48362	394 aa	Known RBP	5.92	□□□□□ -1.46
SRS2	YJL092W	GLC3	P32775	704 aa		5.91	□□□□□ -1.46
SRS2	YJL092W	PBS2	P08018	668 aa		5.9	□□□□□ -1.46
SRS2	YJL092W	PAM1	P37304	830 aa	Known RBP	5.88	□□□□□ -1.47
SRS2	YJL092W	NOP7	P53261	605 aa	Known RBP	5.87	□□□□□ -1.47
SRS2	YJL092W	NUP42	P49686	430 aa	Known RBP	5.86	□□□□□ -1.47
SRS2	YJL092W	HPC2	Q01448	625 aa		5.86	□□□□□ -1.47
SRS2	YJL092W	SNU71	P53207	620 aa	Known RBP	5.86	□□□□□ -1.47
SRS2	YJL092W	YKR023W	P36119	530 aa	Known RBP	5.85	□□□□□ -1.47
SRS2	YJL092W	DIT2	P21595	489 aa		5.84	□□□□□ -1.47
SRS2	YJL092W	ATG36	P46983	293 aa		5.83	□□□□□ -1.48
SRS2	YJL092W	TFB3	Q03290	321 aa		5.82	□□□□□ -1.48
SRS2	YJL092W	YRB30	P53107	440 aa	Predicted RBP	5.79	□□□□□ -1.48
SRS2	YJL092W	IES2	P40154	320 aa		5.79	□□□□□ -1.48
SRS2	YJL092W	GLN1	P32288	370 aa	Known RBP	5.79	□□□□□ -1.48
SRS2	YJL092W	RCR1	P38212	213 aa		5.79	□□□□□ -1.48
SRS2	YJL092W	PKC1	P24583	1151 aa		5.78	□□□□□ -1.48
SRS2	YJL092W	SEN54	Q02825	467 aa	Predicted RBP	5.78	□□□□□ -1.48
SRS2	YJL092W	YTA7	P40340	1379 aa		5.78	□□□□□ -1.48
SRS2	YJL092W	AI2	P03876	854 aa		5.78	□□□□□ -1.48
SRS2	YJL092W	FAR11	P53917	953 aa		5.78	□□□□□ -1.48
SRS2	YJL092W	DOS2	P54858	310 aa		5.78	□□□□□ -1.48
SRS2	YJL092W	MAK21	Q12176	1025 aa	Known RBP	5.78	□□□□□ -1.48
SRS2	YJL092W	BRL1	P38770	471 aa		5.77	□□□□□ -1.49
SRS2	YJL092W	RRN6	P32786	894 aa		5.77	□□□□□ -1.49
SRS2	YJL092W	MET10	P39692	1035 aa		5.77	□□□□□ -1.49
SRS2	YJL092W	SPC42	P36094	363 aa		5.76	□□□□□ -1.49
SRS2	YJL092W	OCA5	P38738	679 aa		5.75	□□□□□ -1.49
SRS2	YJL092W	LAM6	Q08001	693 aa		5.75	□□□□□ -1.49
SRS2	YJL092W	SLD2	P34252	453 aa		5.75	□□□□□ -1.49
SRS2	YJL092W	BIM1	P40013	344 aa		5.74	□□□□□ -1.49
SRS2	YJL092W	SWE1	P32944	819 aa		5.74	□□□□□ -1.49
SRS2	YJL092W	BRN1	P38170	754 aa		5.74	□□□□□ -1.49
SRS2	YJL092W	MAK11	P20484	414 aa	Known RBP	5.73	□□□□□ -1.49
SRS2	YJL092W	ATG32	P40458	529 aa		5.73	□□□□□ -1.49
SRS2	YJL092W	SSA4	P22202	642 aa	Known RBP	5.72	□□□□□ -1.49
SRS2	YJL092W	HEM3	P28789	327 aa		5.72	□□□□□ -1.49
SRS2	YJL092W	SSF1	P38789	453 aa	Predicted RBP	5.72	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms