RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W TFC8Q12308 588 aa10.97□□□□□ -0.65
UBA4YHR111W APM4Q99186 491 aa10.97□□□□□ -0.65
UBA4YHR111W TPK1P06244 397 aa10.96□□□□□ -0.65
UBA4YHR111W SPE1P08432 466 aa10.96□□□□□ -0.65
UBA4YHR111W CDC42P19073 191 aa10.96□□□□□ -0.65
UBA4YHR111W SPO11P23179 398 aa10.96□□□□□ -0.65
UBA4YHR111W RRT12P25381 491 aa10.96□□□□□ -0.65
UBA4YHR111W CBF2P32504 956 aa10.96□□□□□ -0.65
UBA4YHR111W IME2P32581 645 aa10.96□□□□□ -0.65
UBA4YHR111W YKL023WP36103 277 aaKnown RBP10.96□□□□□ -0.65
UBA4YHR111W KIC1P38692 1080 aa10.96□□□□□ -0.65
UBA4YHR111W PEX28P38848 579 aa10.96□□□□□ -0.65
UBA4YHR111W SPO75Q07798 868 aa10.96□□□□□ -0.65
UBA4YHR111W YPR027CQ12079 277 aa10.96□□□□□ -0.65
UBA4YHR111W CHS1P08004 1131 aa10.95□□□□□ -0.66
UBA4YHR111W APE1P14904 514 aa10.95□□□□□ -0.66
UBA4YHR111W APL1P27351 700 aa10.95□□□□□ -0.66
UBA4YHR111W RPC25P35718 212 aa10.95□□□□□ -0.66
UBA4YHR111W YET1P35723 206 aa10.95□□□□□ -0.66
UBA4YHR111W SAH1P39954 449 aaKnown RBP10.95□□□□□ -0.66
UBA4YHR111W CPR7P47103 393 aa10.95□□□□□ -0.66
UBA4YHR111W RAD59Q12223 238 aa10.95□□□□□ -0.66
UBA4YHR111W YDL206WQ12424 762 aa10.95□□□□□ -0.66
UBA4YHR111W GAL10P04397 699 aa10.94□□□□□ -0.66
UBA4YHR111W COX11P19516 300 aaKnown RBP10.94□□□□□ -0.66
UBA4YHR111W PEP7P32609 515 aa10.94□□□□□ -0.66
UBA4YHR111W RGD1P38339 666 aa10.94□□□□□ -0.66
UBA4YHR111W EFM2P38347 419 aa10.94□□□□□ -0.66
UBA4YHR111W TAF1P46677 1066 aa10.94□□□□□ -0.66
UBA4YHR111W STE20Q03497 939 aaKnown RBP10.94□□□□□ -0.66
UBA4YHR111W YLR297WQ05899 129 aa10.94□□□□□ -0.66
UBA4YHR111W SGO1Q08490 590 aa10.94□□□□□ -0.66
UBA4YHR111W LEA1Q08963 238 aaPredicted RBP10.94□□□□□ -0.66
UBA4YHR111W SCJ1P25303 377 aa10.93□□□□□ -0.66
UBA4YHR111W KDX1P36005 433 aa10.93□□□□□ -0.66
UBA4YHR111W PSY4P38193 441 aa10.93□□□□□ -0.66
UBA4YHR111W SHE3P38272 425 aaKnown RBP10.93□□□□□ -0.66
UBA4YHR111W RIM4P38741 713 aa10.93□□□□□ -0.66
UBA4YHR111W BFA1P47113 574 aa10.93□□□□□ -0.66
UBA4YHR111W UBP3Q01477 912 aaKnown RBP RIP-Chip data10.93□□□□□ -0.66 RIP-Chip
UBA4YHR111W PPM1Q04081 328 aa10.93□□□□□ -0.66
UBA4YHR111W TMA16Q08687 178 aa10.93□□□□□ -0.66
UBA4YHR111W RRD2Q12461 358 aa10.93□□□□□ -0.66
UBA4YHR111W HMG2P12684 1045 aa10.92□□□□□ -0.66
UBA4YHR111W ATE1P16639 503 aa10.92□□□□□ -0.66
UBA4YHR111W RNR1P21524 888 aaKnown RBP10.92□□□□□ -0.66
UBA4YHR111W PDE1P22434 369 aa10.92□□□□□ -0.66
UBA4YHR111W PPZ1P26570 692 aa10.92□□□□□ -0.66
UBA4YHR111W CDC11P32458 415 aa10.92□□□□□ -0.66
UBA4YHR111W EFB1P32471 206 aaKnown RBP10.92□□□□□ -0.66
UBA4YHR111W CSR1Q06705 408 aaKnown RBP10.92□□□□□ -0.66
UBA4YHR111W TAF10Q12030 206 aa10.92□□□□□ -0.66
UBA4YHR111W HRT3Q12347 344 aa10.92□□□□□ -0.66
UBA4YHR111W KEX2P13134 814 aa10.91□□□□□ -0.66
UBA4YHR111W GAC1P28006 793 aa10.91□□□□□ -0.66
UBA4YHR111W GEM1P39722 662 aa10.91□□□□□ -0.66
UBA4YHR111W TGL3P40308 642 aa10.91□□□□□ -0.66
UBA4YHR111W SBE2P42223 864 aaKnown RBP10.91□□□□□ -0.66
UBA4YHR111W YJR054WP47114 497 aa10.91□□□□□ -0.66
UBA4YHR111W SLG1P54867 378 aa10.91□□□□□ -0.66
UBA4YHR111W KIP1P28742 1111 aa10.9□□□□□ -0.66
UBA4YHR111W FRE1P32791 686 aa10.9□□□□□ -0.66
UBA4YHR111W MIP6P38760 659 aaKnown RBP10.9□□□□□ -0.66
UBA4YHR111W ZAP1P47043 880 aa10.9□□□□□ -0.66
UBA4YHR111W MUB1Q03162 620 aa10.9□□□□□ -0.66
UBA4YHR111W GPM2Q12008 311 aa10.9□□□□□ -0.66
UBA4YHR111W ECM3Q99252 613 aa10.9□□□□□ -0.66
UBA4YHR111W TKL2P33315 681 aa10.89□□□□□ -0.67
UBA4YHR111W ARL1P38116 183 aaKnown RBP10.89□□□□□ -0.67
UBA4YHR111W SIF2P38262 535 aa10.89□□□□□ -0.67
UBA4YHR111W LEO1P38439 464 aa10.89□□□□□ -0.67
UBA4YHR111W SPT8P38915 602 aa10.89□□□□□ -0.67
UBA4YHR111W VPS25P47142 202 aa10.89□□□□□ -0.67
UBA4YHR111W SSL2Q00578 843 aa10.89□□□□□ -0.67
UBA4YHR111W MZM1Q03429 123 aaPredicted RBP10.89□□□□□ -0.67
UBA4YHR111W WAR1Q03631 944 aa10.89□□□□□ -0.67
UBA4YHR111W PRM6Q04705 352 aa10.89□□□□□ -0.67
UBA4YHR111W AI5_BETAQ9ZZX0 354 aa10.89□□□□□ -0.67
UBA4YHR111W BET2P20133 325 aa10.88□□□□□ -0.67
UBA4YHR111W IMG2P25642 146 aaPredicted RBP10.88□□□□□ -0.67
UBA4YHR111W YBR056WP38081 501 aa10.88□□□□□ -0.67
UBA4YHR111W DSE1P40077 573 aa10.88□□□□□ -0.67
UBA4YHR111W YNL011CP53980 444 aa10.88□□□□□ -0.67
UBA4YHR111W YDR344CQ05510 147 aa10.88□□□□□ -0.67
UBA4YHR111W CWC2Q12046 339 aaPredicted RBP10.88□□□□□ -0.67
UBA4YHR111W DAL2P25335 343 aa10.87□□□□□ -0.67
UBA4YHR111W MET4P32389 672 aa10.87□□□□□ -0.67
UBA4YHR111W CSG2P35206 410 aa10.87□□□□□ -0.67
UBA4YHR111W DRN1P53255 507 aaKnown RBP10.87□□□□□ -0.67
UBA4YHR111W TSR1Q07381 788 aaKnown RBP10.87□□□□□ -0.67
UBA4YHR111W FMP25Q08023 583 aa10.87□□□□□ -0.67
UBA4YHR111W SAT4P25333 603 aaKnown RBP10.86□□□□□ -0.67
UBA4YHR111W PEX34P25584 144 aa10.86□□□□□ -0.67
UBA4YHR111W VBA3P25594 458 aa10.86□□□□□ -0.67
UBA4YHR111W VBA5P36172 582 aa10.86□□□□□ -0.67
UBA4YHR111W EAF7P53911 425 aaKnown RBP10.86□□□□□ -0.67
UBA4YHR111W HER2Q03557 464 aa10.86□□□□□ -0.67
UBA4YHR111W PML39Q03760 334 aa10.86□□□□□ -0.67
UBA4YHR111W SPE3Q12074 293 aaKnown RBP10.86□□□□□ -0.67
UBA4YHR111W CCH1P50077 2039 aa10.86□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms