RNA–Protein interactions for RNA: YGR014W

MSB2, Transcript of Mucin family member involved in various signaling pathways, yeastyeast

Gene MSB2, Length 3,921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSB2YGR014W ENT3P47160 408 aa3.1□□□□□ -1.91
MSB2YGR014W KAP114P53067 1004 aa3.1□□□□□ -1.91
MSB2YGR014W YLR225CQ05948 407 aaKnown RBP3.1□□□□□ -1.91
MSB2YGR014W CDC20P26309 610 aa3.1□□□□□ -1.91
MSB2YGR014W DSS4P32601 143 aa3.1□□□□□ -1.91
MSB2YGR014W ABD1P32783 436 aaPredicted RBP3.1□□□□□ -1.91
MSB2YGR014W HMT1P38074 348 aa3.1□□□□□ -1.91
MSB2YGR014W REG2P38232 338 aa3.1□□□□□ -1.91
MSB2YGR014W CCT4P39078 528 aaKnown RBP3.1□□□□□ -1.91
MSB2YGR014W AVT1P47082 602 aa3.1□□□□□ -1.91
MSB2YGR014W CWC22P53333 577 aaKnown RBP3.1□□□□□ -1.91
MSB2YGR014W TAF9Q05027 157 aa3.1□□□□□ -1.91
MSB2YGR014W SPE3Q12074 293 aaKnown RBP3.1□□□□□ -1.91
MSB2YGR014W SGT2Q12118 346 aaKnown RBP3.1□□□□□ -1.91
MSB2YGR014W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
MSB2YGR014W SUT2Q12286 268 aa3.1□□□□□ -1.91
MSB2YGR014W SES1P07284 462 aaKnown RBP3.09□□□□□ -1.91
MSB2YGR014W RAD16P31244 790 aa3.09□□□□□ -1.91
MSB2YGR014W LTV1P34078 463 aa3.09□□□□□ -1.91
MSB2YGR014W VAB2P40003 282 aa3.09□□□□□ -1.91
MSB2YGR014W FTR1P40088 404 aa3.09□□□□□ -1.91
MSB2YGR014W SET2P46995 733 aaKnown RBP3.09□□□□□ -1.91
MSB2YGR014W SPP1Q03012 353 aa3.09□□□□□ -1.91
MSB2YGR014W SLX4Q12098 748 aa3.09□□□□□ -1.91
MSB2YGR014W CHS1P08004 1131 aa3.09□□□□□ -1.91
MSB2YGR014W CIT2P08679 460 aa3.09□□□□□ -1.91
MSB2YGR014W ASP3-2P0CX77 362 aa3.09□□□□□ -1.91
MSB2YGR014W ASP3-3P0CX78 362 aa3.09□□□□□ -1.91
MSB2YGR014W ASP3-4P0CX79 362 aa3.09□□□□□ -1.91
MSB2YGR014W ASP3-1P0CZ17 362 aa3.09□□□□□ -1.91
MSB2YGR014W RPC53P25441 422 aa3.09□□□□□ -1.91
MSB2YGR014W PLC1P32383 869 aa3.09□□□□□ -1.91
MSB2YGR014W MUD1P32605 298 aaKnown RBP3.09□□□□□ -1.91
MSB2YGR014W SAS3P34218 831 aa3.09□□□□□ -1.91
MSB2YGR014W RRP8P38961 392 aaKnown RBP3.09□□□□□ -1.91
MSB2YGR014W CLA4P48562 842 aa3.09□□□□□ -1.91
MSB2YGR014W ZPR1P53303 486 aaKnown RBP3.09□□□□□ -1.91
MSB2YGR014W YNL040WP53960 456 aaPredicted RBP3.09□□□□□ -1.91
MSB2YGR014W SNU56Q03782 492 aaKnown RBP3.09□□□□□ -1.91
MSB2YGR014W SOV1Q04748 898 aa3.09□□□□□ -1.91
MSB2YGR014W YPR078CQ06813 372 aa3.09□□□□□ -1.91
MSB2YGR014W ICL2Q12031 575 aa3.09□□□□□ -1.91
MSB2YGR014W HOS4P40480 1083 aa3.09□□□□□ -1.92
MSB2YGR014W DOT1Q04089 582 aaKnown RBP3.09□□□□□ -1.92
MSB2YGR014W YOR022CQ12204 715 aa3.09□□□□□ -1.92
MSB2YGR014W CTF3Q12748 733 aa3.09□□□□□ -1.92
MSB2YGR014W IME1P21190 360 aa3.08□□□□□ -1.92
MSB2YGR014W RIM101P33400 625 aa3.08□□□□□ -1.92
MSB2YGR014W LAS1P36146 502 aaPredicted RBP3.08□□□□□ -1.92
MSB2YGR014W YAP5P40574 245 aa3.08□□□□□ -1.92
MSB2YGR014W SPR3P41901 512 aa3.08□□□□□ -1.92
MSB2YGR014W YFL034WP43564 1073 aa3.08□□□□□ -1.92
MSB2YGR014W YGR111WP53265 400 aa3.08□□□□□ -1.92
MSB2YGR014W GYL1Q04322 720 aa3.08□□□□□ -1.92
MSB2YGR014W CSM3Q04659 317 aa3.08□□□□□ -1.92
MSB2YGR014W YLR413WQ06689 675 aa3.08□□□□□ -1.92
MSB2YGR014W VPS54Q12071 889 aa3.08□□□□□ -1.92
MSB2YGR014W RAD1P06777 1100 aa3.08□□□□□ -1.92
MSB2YGR014W MNN1P39106 762 aa3.08□□□□□ -1.92
MSB2YGR014W SNZ3P43545 298 aa3.08□□□□□ -1.92
MSB2YGR014W BFA1P47113 574 aa3.08□□□□□ -1.92
MSB2YGR014W CUL3P53202 744 aa3.08□□□□□ -1.92
MSB2YGR014W SNZ2P53824 298 aa3.08□□□□□ -1.92
MSB2YGR014W YLR177WQ06251 628 aa3.08□□□□□ -1.92
MSB2YGR014W SNX3Q08826 162 aaKnown RBP3.08□□□□□ -1.92
MSB2YGR014W CBF1P17106 351 aa3.08□□□□□ -1.92
MSB2YGR014W SLA2P33338 968 aa3.08□□□□□ -1.92
MSB2YGR014W GRS1P38088 690 aaKnown RBP3.08□□□□□ -1.92
MSB2YGR014W BSD2P38356 321 aa3.08□□□□□ -1.92
MSB2YGR014W KIC1P38692 1080 aa3.08□□□□□ -1.92
MSB2YGR014W MTO1P53070 669 aa3.08□□□□□ -1.92
MSB2YGR014W BUD32P53323 261 aa3.08□□□□□ -1.92
MSB2YGR014W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92not detected
MSB2YGR014W HFI1Q12060 488 aa3.08□□□□□ -1.92
MSB2YGR014W RAP1P11938 827 aa3.07□□□□□ -1.92
MSB2YGR014W VMA2P16140 517 aaKnown RBP3.07□□□□□ -1.92
MSB2YGR014W YSW1P38280 609 aa3.07□□□□□ -1.92
MSB2YGR014W RGD1P38339 666 aa3.07□□□□□ -1.92
MSB2YGR014W GUA1P38625 525 aaKnown RBP3.07□□□□□ -1.92
MSB2YGR014W POL31P46957 487 aa3.07□□□□□ -1.92
MSB2YGR014W USA1Q03714 838 aa3.07□□□□□ -1.92
MSB2YGR014W UFO1Q04511 668 aa3.07□□□□□ -1.92
MSB2YGR014W GRX8Q05926 109 aa3.07□□□□□ -1.92
MSB2YGR014W YOL098CQ12496 1037 aa3.07□□□□□ -1.92
MSB2YGR014W TUF1P02992 437 aaKnown RBP3.07□□□□□ -1.92
MSB2YGR014W THS1P04801 734 aaKnown RBP3.07□□□□□ -1.92
MSB2YGR014W TUB3P09734 445 aaKnown RBP3.07□□□□□ -1.92
MSB2YGR014W ALY1P36117 915 aa3.07□□□□□ -1.92
MSB2YGR014W YHL026CP38740 315 aa3.07□□□□□ -1.92
MSB2YGR014W SEO1P39709 593 aa3.07□□□□□ -1.92
MSB2YGR014W YEL023CP39992 682 aa3.07□□□□□ -1.92
MSB2YGR014W YFL052WP43551 465 aa3.07□□□□□ -1.92
MSB2YGR014W DUS1P53759 423 aaKnown RBP3.07□□□□□ -1.92
MSB2YGR014W MAM3Q12296 706 aa3.07□□□□□ -1.92
MSB2YGR014W APM4Q99186 491 aa3.07□□□□□ -1.92
MSB2YGR014W YLR149CQ99296 730 aa3.07□□□□□ -1.92
MSB2YGR014W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92 RIP-Chip
MSB2YGR014W GCR1P07261 785 aa3.07□□□□□ -1.92
MSB2YGR014W ADH4P10127 382 aa3.07□□□□□ -1.92
MSB2YGR014W SMI1P32566 505 aa3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms