RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeastyeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB2YDL084W VHS3Q08438 674 aa6.09□□□□□ -1.43
SUB2YDL084W ABP140Q08641 628 aaKnown RBP6.09□□□□□ -1.43
SUB2YDL084W SCM3Q12334 223 aa6.09□□□□□ -1.43
SUB2YDL084W RPO31P04051 1460 aa6.09□□□□□ -1.43
SUB2YDL084W LAM4P38800 1345 aa6.08□□□□□ -1.44
SUB2YDL084W PAB1P04147 577 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44not detected
SUB2YDL084W FBP1P09201 348 aa6.08□□□□□ -1.44
SUB2YDL084W ADH4P10127 382 aa6.08□□□□□ -1.44
SUB2YDL084W PET122P10355 254 aa6.08□□□□□ -1.44
SUB2YDL084W PHO8P11491 566 aa6.08□□□□□ -1.44
SUB2YDL084W FUS1P11710 512 aa6.08□□□□□ -1.44
SUB2YDL084W SPO16P17122 198 aa6.08□□□□□ -1.44
SUB2YDL084W ADE2P21264 571 aaKnown RBP6.08□□□□□ -1.44
SUB2YDL084W YJU2P28320 278 aaPredicted RBP6.08□□□□□ -1.44
SUB2YDL084W MGM101P32787 269 aaKnown RBP6.08□□□□□ -1.44
SUB2YDL084W SLA2P33338 968 aa6.08□□□□□ -1.44
SUB2YDL084W PMT1P33775 817 aa6.08□□□□□ -1.44
SUB2YDL084W RRM3P38766 723 aa6.08□□□□□ -1.44
SUB2YDL084W ERP5P38819 212 aa6.08□□□□□ -1.44
SUB2YDL084W YTA12P40341 825 aa6.08□□□□□ -1.44
SUB2YDL084W THI12P42883 340 aa6.08□□□□□ -1.44
SUB2YDL084W THI5P43534 340 aa6.08□□□□□ -1.44
SUB2YDL084W GYP8P43570 497 aa6.08□□□□□ -1.44
SUB2YDL084W LIA1P47120 325 aaKnown RBP6.08□□□□□ -1.44
SUB2YDL084W THI11P47183 340 aa6.08□□□□□ -1.44
SUB2YDL084W YNL146WP53906 100 aa6.08□□□□□ -1.44
SUB2YDL084W GTR1Q00582 310 aa6.08□□□□□ -1.44
SUB2YDL084W UTP5Q04177 643 aaKnown RBP6.08□□□□□ -1.44
SUB2YDL084W SPR28Q04921 423 aa6.08□□□□□ -1.44
SUB2YDL084W DCS1Q06151 350 aa6.08□□□□□ -1.44
SUB2YDL084W THI13Q07748 340 aa6.08□□□□□ -1.44
SUB2YDL084W CMC2Q3E7A4 109 aa6.08□□□□□ -1.44
SUB2YDL084W BIK1P11709 440 aa6.07□□□□□ -1.44
SUB2YDL084W SST2P11972 698 aaKnown RBP6.07□□□□□ -1.44
SUB2YDL084W PRD1P25375 712 aa6.07□□□□□ -1.44
SUB2YDL084W HMX1P32339 317 aa6.07□□□□□ -1.44
SUB2YDL084W SCT1P32784 759 aa6.07□□□□□ -1.44
SUB2YDL084W BOI1P38041 980 aaKnown RBP6.07□□□□□ -1.44
SUB2YDL084W RDH54P38086 958 aa6.07□□□□□ -1.44
SUB2YDL084W YMR262WP38430 313 aa6.07□□□□□ -1.44
SUB2YDL084W RFC1P38630 861 aaKnown RBP6.07□□□□□ -1.44
SUB2YDL084W YHL050CP38721 697 aa6.07□□□□□ -1.44
SUB2YDL084W BCD1P38772 366 aa6.07□□□□□ -1.44
SUB2YDL084W NOP16P40007 231 aaKnown RBP6.07□□□□□ -1.44
SUB2YDL084W PCI8P40512 444 aa6.07□□□□□ -1.44
SUB2YDL084W ARF3P40994 183 aaRIP-Chip data6.07□□□□□ -1.44not detected
SUB2YDL084W MDE1P47095 244 aa6.07□□□□□ -1.44
SUB2YDL084W RNR4P49723 345 aaKnown RBP6.07□□□□□ -1.44
SUB2YDL084W COG2P53271 262 aa6.07□□□□□ -1.44
SUB2YDL084W FPK1P53739 893 aa6.07□□□□□ -1.44
SUB2YDL084W SIW14P53965 281 aa6.07□□□□□ -1.44
SUB2YDL084W MET14Q02196 202 aa6.07□□□□□ -1.44
SUB2YDL084W YPL109CQ02981 657 aa6.07□□□□□ -1.44
SUB2YDL084W HOT1Q03213 719 aa6.07□□□□□ -1.44
SUB2YDL084W DPB4Q04603 196 aaKnown RBP6.07□□□□□ -1.44
SUB2YDL084W YDR056CQ12025 205 aa6.07□□□□□ -1.44
SUB2YDL084W YRR1Q12172 810 aa6.07□□□□□ -1.44
SUB2YDL084W SPO21Q12411 609 aa6.07□□□□□ -1.44
SUB2YDL084W PDR18P53756 1333 aa6.06□□□□□ -1.44
SUB2YDL084W PGK1P00560 416 aaKnown RBP6.06□□□□□ -1.44
SUB2YDL084W ARD1P07347 238 aaPredicted RBP6.06□□□□□ -1.44
SUB2YDL084W TRL1P09880 827 aaKnown RBP6.06□□□□□ -1.44
SUB2YDL084W DSF1P0CX08 502 aa6.06□□□□□ -1.44
SUB2YDL084W YNR073CP0CX09 502 aa6.06□□□□□ -1.44
SUB2YDL084W NMT1P14743 455 aa6.06□□□□□ -1.44
SUB2YDL084W RPL8AP17076 256 aaKnown RBP6.06□□□□□ -1.44
SUB2YDL084W MSB1P21339 1137 aaKnown RBP6.06□□□□□ -1.44
SUB2YDL084W PUP1P25043 261 aa6.06□□□□□ -1.44
SUB2YDL084W SPS22P25380 463 aa6.06□□□□□ -1.44
SUB2YDL084W RPL8BP29453 256 aaKnown RBP6.06□□□□□ -1.44
SUB2YDL084W MCM10P32354 571 aa6.06□□□□□ -1.44
SUB2YDL084W ORC2P32833 620 aa6.06□□□□□ -1.44
SUB2YDL084W YUH1P35127 236 aa6.06□□□□□ -1.44
SUB2YDL084W RMA1P36001 430 aaKnown RBP6.06□□□□□ -1.44
SUB2YDL084W SDS22P36047 338 aa6.06□□□□□ -1.44
SUB2YDL084W YKL133CP36066 463 aa6.06□□□□□ -1.44
SUB2YDL084W JLP2P40206 208 aa6.06□□□□□ -1.44
SUB2YDL084W YRB2P40517 327 aa6.06□□□□□ -1.44
SUB2YDL084W LOC1P43586 204 aaPredicted RBP6.06□□□□□ -1.44
SUB2YDL084W BRE5P53741 515 aaKnown RBP6.06□□□□□ -1.44
SUB2YDL084W SSL2Q00578 843 aa6.06□□□□□ -1.44
SUB2YDL084W CWC15Q03772 175 aaKnown RBP6.06□□□□□ -1.44
SUB2YDL084W GSF2Q04697 403 aaKnown RBP6.06□□□□□ -1.44
SUB2YDL084W YLR287CQ05881 355 aa6.06□□□□□ -1.44
SUB2YDL084W CUE5Q08412 411 aaKnown RBP6.06□□□□□ -1.44
SUB2YDL084W RTT10Q08924 1013 aa6.06□□□□□ -1.44
SUB2YDL084W ATP16Q12165 160 aa6.06□□□□□ -1.44
SUB2YDL084W MNL2Q12205 849 aa6.06□□□□□ -1.44
SUB2YDL084W SFI1Q12369 946 aa6.06□□□□□ -1.44
SUB2YDL084W ADR1P07248 1323 aa6.06□□□□□ -1.44
SUB2YDL084W REP1P03871 373 aa6.05□□□□□ -1.44
SUB2YDL084W MIS1P09440 975 aaKnown RBP6.05□□□□□ -1.44
SUB2YDL084W MRP7P12687 371 aa6.05□□□□□ -1.44
SUB2YDL084W YPK2P18961 677 aa6.05□□□□□ -1.44
SUB2YDL084W SFL1P20134 766 aa6.05□□□□□ -1.44
SUB2YDL084W CLN2P20438 545 aa6.05□□□□□ -1.44
SUB2YDL084W MSP1P28737 362 aa6.05□□□□□ -1.44
SUB2YDL084W ITR2P30606 609 aa6.05□□□□□ -1.44
SUB2YDL084W SEC21P32074 935 aaKnown RBP6.05□□□□□ -1.44
SUB2YDL084W GUT2P32191 649 aa6.05□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms