RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C LSO1Q3E827 93 aa6.42□□□□□ -1.38
VPS4YPR173C RAD61Q99359 647 aa6.42□□□□□ -1.38
VPS4YPR173C TUS1Q06412 1307 aa6.42□□□□□ -1.38
VPS4YPR173C NUC1P08466 329 aa6.41□□□□□ -1.38
VPS4YPR173C CKA2P19454 339 aa6.41□□□□□ -1.38
VPS4YPR173C YCR051WP25631 222 aa6.41□□□□□ -1.38
VPS4YPR173C PET10P36139 283 aa6.41□□□□□ -1.38
VPS4YPR173C YKR075CP36155 307 aa6.41□□□□□ -1.38
VPS4YPR173C AHP1P38013 176 aaKnown RBP6.41□□□□□ -1.38
VPS4YPR173C YHL050CP38721 697 aa6.41□□□□□ -1.38
VPS4YPR173C ICP55P40051 511 aa6.41□□□□□ -1.38
VPS4YPR173C QDR1P40475 563 aa6.41□□□□□ -1.38
VPS4YPR173C MDJ2P42834 146 aa6.41□□□□□ -1.38
VPS4YPR173C RPC17P47076 161 aa6.41□□□□□ -1.38
VPS4YPR173C YJR142WP47173 342 aa6.41□□□□□ -1.38
VPS4YPR173C TOF1P53840 1238 aa6.41□□□□□ -1.38
VPS4YPR173C SEC5P89102 971 aa6.41□□□□□ -1.38
VPS4YPR173C SEN54Q02825 467 aaPredicted RBP6.41□□□□□ -1.38
VPS4YPR173C HOT1Q03213 719 aa6.41□□□□□ -1.38
VPS4YPR173C PRP42Q03776 544 aaKnown RBP6.41□□□□□ -1.38
VPS4YPR173C YPR078CQ06813 372 aa6.41□□□□□ -1.38
VPS4YPR173C Q0182Q9ZZW1 134 aa6.41□□□□□ -1.38
VPS4YPR173C ERG11P10614 530 aa6.4□□□□□ -1.39
VPS4YPR173C SMY1P32364 656 aaKnown RBP6.4□□□□□ -1.39
VPS4YPR173C NIP1P32497 812 aaKnown RBP6.4□□□□□ -1.39
VPS4YPR173C SMC1P32908 1225 aa6.4□□□□□ -1.39
VPS4YPR173C PTK1P36002 662 aaPredicted RBP6.4□□□□□ -1.39
VPS4YPR173C JNM1P36224 373 aa6.4□□□□□ -1.39
VPS4YPR173C HEK2P38199 381 aaKnown RBP RIP-Chip data6.4□□□□□ -1.39not detected
VPS4YPR173C SEC26P41810 973 aaKnown RBP6.4□□□□□ -1.39
VPS4YPR173C YNL320WP42840 284 aa6.4□□□□□ -1.39
VPS4YPR173C YGR021WP53212 290 aa6.4□□□□□ -1.39
VPS4YPR173C ZPR1P53303 486 aaKnown RBP6.4□□□□□ -1.39
VPS4YPR173C YNL165WP53891 406 aa6.4□□□□□ -1.39
VPS4YPR173C SUB1P54000 292 aaKnown RBP6.4□□□□□ -1.39
VPS4YPR173C GTR1Q00582 310 aa6.4□□□□□ -1.39
VPS4YPR173C UBP2Q01476 1272 aa6.4□□□□□ -1.39
VPS4YPR173C RAT1Q02792 1006 aaKnown RBP6.4□□□□□ -1.39
VPS4YPR173C TFB2Q02939 513 aa6.4□□□□□ -1.39
VPS4YPR173C PIG1Q06216 648 aa6.4□□□□□ -1.39
VPS4YPR173C DIB1Q06819 143 aaPredicted RBP6.4□□□□□ -1.39
VPS4YPR173C TSR1Q07381 788 aaKnown RBP6.4□□□□□ -1.39
VPS4YPR173C DSE3Q08729 430 aa6.4□□□□□ -1.39
VPS4YPR173C CLF1Q12309 687 aaPredicted RBP6.4□□□□□ -1.39
VPS4YPR173C ADH4P10127 382 aa6.39□□□□□ -1.39
VPS4YPR173C MRPL33P20084 86 aa6.39□□□□□ -1.39
VPS4YPR173C ISY1P21374 235 aaPredicted RBP6.39□□□□□ -1.39
VPS4YPR173C ILV6P25605 309 aaKnown RBP6.39□□□□□ -1.39
VPS4YPR173C BUD14P27637 709 aa6.39□□□□□ -1.39
VPS4YPR173C IRE1P32361 1115 aa6.39□□□□□ -1.39
VPS4YPR173C CDC11P32458 415 aa6.39□□□□□ -1.39
VPS4YPR173C VID27P40157 782 aa6.39□□□□□ -1.39
VPS4YPR173C DOT5P40553 215 aa6.39□□□□□ -1.39
VPS4YPR173C SAP185P40856 1058 aa6.39□□□□□ -1.39
VPS4YPR173C VPS4P52917 437 aa6.39□□□□□ -1.39
VPS4YPR173C TAD1P53065 400 aa6.39□□□□□ -1.39
VPS4YPR173C TAN1P53072 289 aaPredicted RBP6.39□□□□□ -1.39
VPS4YPR173C VPS16Q03308 798 aa6.39□□□□□ -1.39
VPS4YPR173C USA1Q03714 838 aa6.39□□□□□ -1.39
VPS4YPR173C CSM3Q04659 317 aa6.39□□□□□ -1.39
VPS4YPR173C SMD2Q06217 110 aaKnown RBP6.39□□□□□ -1.39
VPS4YPR173C YLR177WQ06251 628 aa6.39□□□□□ -1.39
VPS4YPR173C MAG2Q06436 670 aaKnown RBP6.39□□□□□ -1.39
VPS4YPR173C YPL216WQ08964 1102 aa6.39□□□□□ -1.39
VPS4YPR173C NCA2Q12374 616 aa6.39□□□□□ -1.39
VPS4YPR173C SEY1Q99287 776 aa6.39□□□□□ -1.39
VPS4YPR173C RPL8BP29453 256 aaKnown RBP6.38□□□□□ -1.39
VPS4YPR173C NAM7P30771 971 aaKnown RBP6.38□□□□□ -1.39
VPS4YPR173C MLF3P32047 452 aa6.38□□□□□ -1.39
VPS4YPR173C YME1P32795 747 aa6.38□□□□□ -1.39
VPS4YPR173C PRP40P33203 583 aaKnown RBP6.38□□□□□ -1.39
VPS4YPR173C XRS2P33301 854 aa6.38□□□□□ -1.39
VPS4YPR173C NIP100P33420 868 aa6.38□□□□□ -1.39
VPS4YPR173C SAS3P34218 831 aa6.38□□□□□ -1.39
VPS4YPR173C DEF1P35732 738 aaKnown RBP6.38□□□□□ -1.39
VPS4YPR173C SPL2P38839 148 aa6.38□□□□□ -1.39
VPS4YPR173C YHR219WP38900 624 aa6.38□□□□□ -1.39
VPS4YPR173C SMX2P40204 77 aaKnown RBP6.38□□□□□ -1.39
VPS4YPR173C HXT8P40886 569 aa6.38□□□□□ -1.39
VPS4YPR173C MMM1P41800 426 aa6.38□□□□□ -1.39
VPS4YPR173C TDA10P42938 290 aa6.38□□□□□ -1.39
VPS4YPR173C ACF4P47129 309 aa6.38□□□□□ -1.39
VPS4YPR173C PIP2P52960 996 aa6.38□□□□□ -1.39
VPS4YPR173C MDR1P53258 950 aa6.38□□□□□ -1.39
VPS4YPR173C DSE4P53753 1117 aa6.38□□□□□ -1.39
VPS4YPR173C YPL109CQ02981 657 aa6.38□□□□□ -1.39
VPS4YPR173C SPO19Q03029 223 aa6.38□□□□□ -1.39
VPS4YPR173C SYF1Q04048 859 aaPredicted RBP6.38□□□□□ -1.39
VPS4YPR173C ADY4Q05955 493 aa6.38□□□□□ -1.39
VPS4YPR173C OPT2Q06593 877 aa6.38□□□□□ -1.39
VPS4YPR173C MDM38Q08179 573 aa6.38□□□□□ -1.39
VPS4YPR173C YPL260WQ08977 551 aa6.38□□□□□ -1.39
VPS4YPR173C RPS31P05759 152 aaKnown RBP6.37□□□□□ -1.39
VPS4YPR173C YMR085WP0CF18 432 aa6.37□□□□□ -1.39
VPS4YPR173C PRP9P19736 530 aaKnown RBP6.37□□□□□ -1.39
VPS4YPR173C PRP4P20053 465 aaKnown RBP6.37□□□□□ -1.39
VPS4YPR173C PRO3P32263 286 aaKnown RBP6.37□□□□□ -1.39
VPS4YPR173C YME2P32843 850 aa6.37□□□□□ -1.39
VPS4YPR173C MCD4P36051 919 aa6.37□□□□□ -1.39
VPS4YPR173C GLY1P37303 387 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms