RNA–Protein interactions for RNA: YPL056C

LCL1, Transcript of Putative protein of unknown function, yeast

Gene LCL1, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCL1	YPL056C	CBF2	P32504	956 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	MRE11	P32829	692 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	PEP12	P32854	288 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	UBC6	P33296	250 aa	Predicted RBP	2.81	□□□□□ -1.96
LCL1	YPL056C	CNS1	P33313	385 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	BMH2	P34730	273 aa	Known RBP	2.81	□□□□□ -1.96
LCL1	YPL056C	MDJ1	P35191	511 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	SPP381	P38282	291 aa	Predicted RBP	2.81	□□□□□ -1.96
LCL1	YPL056C	YER130C	P39959	443 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	AIM9	P40053	627 aa	Known RBP	2.81	□□□□□ -1.96
LCL1	YPL056C	YER156C	P40093	338 aa	Known RBP	2.81	□□□□□ -1.96
LCL1	YPL056C	RLP7	P40693	322 aa	Known RBP	2.81	□□□□□ -1.96
LCL1	YPL056C	MKT1	P40850	830 aa	Known RBP	2.81	□□□□□ -1.96
LCL1	YPL056C	YJR054W	P47114	497 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	HAM1	P47119	197 aa	Known RBP	2.81	□□□□□ -1.96
LCL1	YPL056C	EAF6	P47128	113 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	SSN8	P47821	323 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	GCV2	P49095	1034 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	UBA2	P52488	636 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	PEX14	P53112	341 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	MON1	P53129	644 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	ZPR1	P53303	486 aa	Known RBP	2.81	□□□□□ -1.96
LCL1	YPL056C	IPI3	P53877	555 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	YNL144C	P53907	740 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	ADE16	P54113	591 aa	Known RBP	2.81	□□□□□ -1.96
LCL1	YPL056C	CTF4	Q01454	927 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	MEC3	Q02574	474 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	YML020W	Q03722	664 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	SYF1	Q04048	859 aa	Predicted RBP	2.81	□□□□□ -1.96
LCL1	YPL056C	TAP42	Q04372	366 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	COX20	Q04935	205 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	DYN3	Q04949	312 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	SMD2	Q06217	110 aa	Known RBP	2.81	□□□□□ -1.96
LCL1	YPL056C	ATG13	Q06628	738 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	MDM36	Q06820	579 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	NSE1	Q07913	336 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	2.81	□□□□□ -1.96	not detected
LCL1	YPL056C	NOB1	Q08444	459 aa	Known RBP	2.81	□□□□□ -1.96
LCL1	YPL056C	YOR352W	Q08816	343 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	SOG2	Q08817	791 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	GET4	Q12125	312 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	RRP6	Q12149	733 aa	Known RBP	2.81	□□□□□ -1.96
LCL1	YPL056C	YPL150W	Q12152	901 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	PHM7	Q12252	991 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	TAF3	Q12297	353 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	POM152	P39685	1337 aa		2.81	□□□□□ -1.96
LCL1	YPL056C	JIP3	O13555	125 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	CPA2	P03965	1118 aa	Known RBP	2.8	□□□□□ -1.96
LCL1	YPL056C	PIF1	P07271	859 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	RAD4	P14736	754 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	GCN3	P14741	305 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	MER1	P16523	270 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	PRP6	P19735	899 aa	Predicted RBP	2.8	□□□□□ -1.96
LCL1	YPL056C	PRP4	P20053	465 aa	Known RBP	2.8	□□□□□ -1.96
LCL1	YPL056C	OPI1	P21957	404 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	DPB2	P24482	689 aa	Predicted RBP	2.8	□□□□□ -1.96
LCL1	YPL056C	OCA4	P25366	362 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	RDS1	P25611	832 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	YCR016W	P25617	290 aa	Known RBP	2.8	□□□□□ -1.96
LCL1	YPL056C	PEP7	P32609	515 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	TFC4	P33339	1025 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	ATG19	P35193	415 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	APL2	P36000	726 aa	Predicted RBP	2.8	□□□□□ -1.96
LCL1	YPL056C	YKR015C	P36111	568 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	ATP3	P38077	311 aa	Known RBP	2.8	□□□□□ -1.96
LCL1	YPL056C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	2.8	□□□□□ -1.96	RIP-Chip
LCL1	YPL056C	TOS1	P38288	455 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	VMA22	P38784	181 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	STN1	P38960	494 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	PIK1	P39104	1066 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	NOC2	P39744	710 aa	Known RBP	2.8	□□□□□ -1.96
LCL1	YPL056C	VHR2	P40041	505 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	ESL1	P40456	1118 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	IRR1	P40541	1150 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	RNR4	P49723	345 aa	Known RBP	2.8	□□□□□ -1.96
LCL1	YPL056C	MPS2	P53159	387 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	YGR054W	P53235	642 aa	Known RBP	2.8	□□□□□ -1.96
LCL1	YPL056C	MDR1	P53258	950 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	YNL058C	P53947	316 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	UFD2	P54860	961 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	VPS16	Q03308	798 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	EMI2	Q04409	500 aa	Known RBP	2.8	□□□□□ -1.96
LCL1	YPL056C	VPS38	Q05919	439 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	ATG17	Q06410	417 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	CSR1	Q06705	408 aa	Known RBP	2.8	□□□□□ -1.96
LCL1	YPL056C	ISU2	Q12056	156 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	BUG1	Q12191	341 aa		2.8	□□□□□ -1.96
LCL1	YPL056C	SNU66	Q12420	587 aa	Predicted RBP	2.8	□□□□□ -1.96
LCL1	YPL056C	FAS2	P19097	1887 aa	Known RBP	2.79	□□□□□ -1.96
LCL1	YPL056C	LPD1	P09624	499 aa	Known RBP	2.79	□□□□□ -1.96
LCL1	YPL056C	MAK16	P10962	306 aa	Predicted RBP	2.79	□□□□□ -1.96
LCL1	YPL056C	SUP45	P12385	437 aa	Known RBP	2.79	□□□□□ -1.96
LCL1	YPL056C	KIN2	P13186	1147 aa	Known RBP	2.79	□□□□□ -1.96
LCL1	YPL056C	PEX1	P24004	1043 aa		2.79	□□□□□ -1.96
LCL1	YPL056C	RRP43	P25359	394 aa	Predicted RBP	2.79	□□□□□ -1.96
LCL1	YPL056C	ADY2	P25613	283 aa		2.79	□□□□□ -1.96
LCL1	YPL056C	APL1	P27351	700 aa		2.79	□□□□□ -1.96
LCL1	YPL056C	SIN4	P32259	974 aa		2.79	□□□□□ -1.96
LCL1	YPL056C	PYC2	P32327	1180 aa	Known RBP	2.79	□□□□□ -1.96
LCL1	YPL056C	SMY1	P32364	656 aa	Known RBP	2.79	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 13 ms