RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C NET1P47035 1189 aa5.75□□□□□ -1.49
CCS1YMR038C SSY1Q03770 852 aa5.75□□□□□ -1.49
CCS1YMR038C TDA5Q06417 326 aaKnown RBP5.75□□□□□ -1.49
CCS1YMR038C WRS1Q12109 432 aaKnown RBP5.75□□□□□ -1.49
CCS1YMR038C PSF3Q12146 194 aa5.75□□□□□ -1.49
CCS1YMR038C TY3A-GQ12173 290 aa5.75□□□□□ -1.49
CCS1YMR038C NSI1Q12457 570 aa5.75□□□□□ -1.49
CCS1YMR038C TY3A-IQ99219 290 aa5.75□□□□□ -1.49
CCS1YMR038C RPL11AP0C0W9 174 aaKnown RBP5.74□□□□□ -1.49
CCS1YMR038C SWC3P31376 625 aa5.74□□□□□ -1.49
CCS1YMR038C PUB1P32588 453 aaKnown RBP RIP-Chip data5.74□□□□□ -1.49not detected
CCS1YMR038C OMA1P36163 345 aa5.74□□□□□ -1.49
CCS1YMR038C MXR1P40029 184 aa5.74□□□□□ -1.49
CCS1YMR038C GTS1P40956 396 aa5.74□□□□□ -1.49
CCS1YMR038C SHE9Q04172 456 aa5.74□□□□□ -1.49
CCS1YMR038C BRE4Q07660 1125 aa5.74□□□□□ -1.49
CCS1YMR038C CFT2Q12102 859 aaPredicted RBP5.74□□□□□ -1.49
CCS1YMR038C AHC1Q12433 566 aa5.74□□□□□ -1.49
CCS1YMR038C YOR131CQ12486 218 aa5.74□□□□□ -1.49
CCS1YMR038C RPL11BQ3E757 174 aaPredicted RBP5.74□□□□□ -1.49
CCS1YMR038C SAC3P46674 1301 aa5.74□□□□□ -1.49
CCS1YMR038C SUP35P05453 685 aaKnown RBP5.73□□□□□ -1.49
CCS1YMR038C STE5P32917 917 aa5.73□□□□□ -1.49
CCS1YMR038C OCT1P35999 772 aa5.73□□□□□ -1.49
CCS1YMR038C MBP1P39678 833 aa5.73□□□□□ -1.49
CCS1YMR038C SPP382Q06411 708 aaPredicted RBP5.73□□□□□ -1.49
CCS1YMR038C YDL144CQ07589 356 aa5.73□□□□□ -1.49
CCS1YMR038C RSC58Q07979 502 aa5.73□□□□□ -1.49
CCS1YMR038C PPM2Q08282 695 aa5.73□□□□□ -1.49
CCS1YMR038C LPX1Q12405 387 aaKnown RBP5.73□□□□□ -1.49
CCS1YMR038C ADR1P07248 1323 aa5.73□□□□□ -1.49
CCS1YMR038C ADP1P25371 1049 aa5.72□□□□□ -1.49
CCS1YMR038C CDC60P26637 1090 aaKnown RBP5.72□□□□□ -1.49
CCS1YMR038C RAD24P32641 659 aa5.72□□□□□ -1.49
CCS1YMR038C RPT3P33298 428 aaKnown RBP5.72□□□□□ -1.49
CCS1YMR038C PIN4P34217 668 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
CCS1YMR038C PIK1P39104 1066 aa5.72□□□□□ -1.49
CCS1YMR038C KRI1P42846 591 aaKnown RBP5.72□□□□□ -1.49
CCS1YMR038C ECM30Q06673 1274 aa5.72□□□□□ -1.49
CCS1YMR038C PMA1P05030 918 aaKnown RBP5.71□□□□□ -1.5
CCS1YMR038C RAD53P22216 821 aa5.71□□□□□ -1.5
CCS1YMR038C SLA2P33338 968 aa5.71□□□□□ -1.5
CCS1YMR038C UIP5P36137 443 aa5.71□□□□□ -1.5
CCS1YMR038C CCZ1P38273 704 aa5.71□□□□□ -1.5
CCS1YMR038C KEL1P38853 1164 aaKnown RBP5.71□□□□□ -1.5
CCS1YMR038C VAB2P40003 282 aa5.71□□□□□ -1.5
CCS1YMR038C LYS14P40971 790 aa5.71□□□□□ -1.5
CCS1YMR038C FMP30Q02883 468 aa5.71□□□□□ -1.5
CCS1YMR038C LIP5P32875 414 aa5.7□□□□□ -1.5
CCS1YMR038C MRP8P35719 219 aa5.7□□□□□ -1.5
CCS1YMR038C YBR184WP38299 523 aa5.7□□□□□ -1.5
CCS1YMR038C OCA5P38738 679 aa5.7□□□□□ -1.5
CCS1YMR038C UBP12P39538 1254 aa5.7□□□□□ -1.5
CCS1YMR038C NUG1P40010 520 aaKnown RBP5.7□□□□□ -1.5
CCS1YMR038C NNF1P47149 201 aa5.7□□□□□ -1.5
CCS1YMR038C SNU66Q12420 587 aaPredicted RBP5.7□□□□□ -1.5
CCS1YMR038C AIM26P32858 118 aa5.69□□□□□ -1.5
CCS1YMR038C HSP78P33416 811 aa5.69□□□□□ -1.5
CCS1YMR038C ACA1P39970 489 aa5.69□□□□□ -1.5
CCS1YMR038C ORC3P54790 616 aa5.69□□□□□ -1.5
CCS1YMR038C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.69□□□□□ -1.5not detected
CCS1YMR038C ACM1Q08981 209 aa5.69□□□□□ -1.5
CCS1YMR038C ICL2Q12031 575 aa5.69□□□□□ -1.5
CCS1YMR038C HIP1P06775 603 aa5.68□□□□□ -1.5
CCS1YMR038C YBL028CP38202 106 aa5.68□□□□□ -1.5
CCS1YMR038C GEM1P39722 662 aa5.68□□□□□ -1.5
CCS1YMR038C SNF7P39929 240 aaKnown RBP5.68□□□□□ -1.5
CCS1YMR038C IRR1P40541 1150 aa5.68□□□□□ -1.5
CCS1YMR038C YFH7P43591 353 aa5.68□□□□□ -1.5
CCS1YMR038C PFD1P46988 109 aa5.68□□□□□ -1.5
CCS1YMR038C NAN1Q02931 896 aaKnown RBP5.68□□□□□ -1.5
CCS1YMR038C NBA1Q08229 501 aaKnown RBP5.68□□□□□ -1.5
CCS1YMR038C FLO1P32768 1537 aa5.68□□□□□ -1.5
CCS1YMR038C YKL151CP36059 337 aa5.67□□□□□ -1.5
CCS1YMR038C ABZ1P37254 787 aaPredicted RBP5.67□□□□□ -1.5
CCS1YMR038C PBY1P38254 753 aa5.67□□□□□ -1.5
CCS1YMR038C YJL049WP47048 450 aa5.67□□□□□ -1.5
CCS1YMR038C BRE5P53741 515 aaKnown RBP5.67□□□□□ -1.5
CCS1YMR038C MET7Q08645 548 aa5.67□□□□□ -1.5
CCS1YMR038C SUT2Q12286 268 aa5.67□□□□□ -1.5
CCS1YMR038C BI4P03879 638 aa5.66□□□□□ -1.5
CCS1YMR038C SUI2P20459 304 aaKnown RBP5.66□□□□□ -1.5
CCS1YMR038C YHR131CP38835 850 aa5.66□□□□□ -1.5
CCS1YMR038C YIR042CP40586 236 aa5.66□□□□□ -1.5
CCS1YMR038C IOC3P43596 787 aa5.66□□□□□ -1.5
CCS1YMR038C HRQ1Q05549 1077 aa5.66□□□□□ -1.5
CCS1YMR038C FMP25Q08023 583 aa5.66□□□□□ -1.5
CCS1YMR038C SPS1P08458 490 aa5.65□□□□□ -1.5
CCS1YMR038C AIM21P40563 679 aa5.65□□□□□ -1.5
CCS1YMR038C GUS1P46655 708 aaKnown RBP RIP-Chip data5.65□□□□□ -1.5not detected
CCS1YMR038C CSI1Q04368 295 aa5.65□□□□□ -1.5
CCS1YMR038C RSB1Q08417 382 aa5.65□□□□□ -1.5
CCS1YMR038C MDM20Q12387 796 aaKnown RBP5.65□□□□□ -1.5
CCS1YMR038C YOL098CQ12496 1037 aa5.65□□□□□ -1.5
CCS1YMR038C SNF3P10870 884 aa5.64□□□□□ -1.51
CCS1YMR038C SEC18P18759 758 aaKnown RBP5.64□□□□□ -1.51
CCS1YMR038C PRE10P21242 288 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
CCS1YMR038C RPL8BP29453 256 aaKnown RBP5.64□□□□□ -1.51
CCS1YMR038C LRG1P35688 1017 aa5.64□□□□□ -1.51
CCS1YMR038C PTK1P36002 662 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms