RNA–Protein interactions for RNA: YHR165C

PRP8, Transcript of Component of U4/U6-U5 snRNP complex, yeastyeast

Gene PRP8, Length 7,242 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP8YHR165C RSC2Q06488 889 aa2.91□□□□□ -1.94
PRP8YHR165C SLX4Q12098 748 aa2.91□□□□□ -1.94
PRP8YHR165C SSF2Q12153 453 aaPredicted RBP2.91□□□□□ -1.94
PRP8YHR165C AI5_BETAQ9ZZX0 354 aa2.91□□□□□ -1.94
PRP8YHR165C THS1P04801 734 aaKnown RBP2.91□□□□□ -1.94
PRP8YHR165C MST1P07236 462 aa2.91□□□□□ -1.94
PRP8YHR165C PHO4P07270 312 aaKnown RBP2.91□□□□□ -1.94
PRP8YHR165C RAD27P26793 382 aa2.91□□□□□ -1.94
PRP8YHR165C NAB2P32505 525 aaKnown RBP RIP-Chip data2.91□□□□□ -1.94not detected
PRP8YHR165C RAD5P32849 1169 aaPredicted RBP2.91□□□□□ -1.94
PRP8YHR165C TPS3P38426 1054 aaKnown RBP2.91□□□□□ -1.94
PRP8YHR165C CIC1P38779 376 aaKnown RBP2.91□□□□□ -1.94
PRP8YHR165C MDR1P53258 950 aa2.91□□□□□ -1.94
PRP8YHR165C NCS2P53923 493 aaPredicted RBP2.91□□□□□ -1.94
PRP8YHR165C HDA2Q06629 674 aa2.91□□□□□ -1.94
PRP8YHR165C SRO7Q12038 1033 aa2.91□□□□□ -1.94
PRP8YHR165C ATG9Q12142 997 aa2.91□□□□□ -1.94
PRP8YHR165C NUP133P36161 1157 aa2.91□□□□□ -1.94
PRP8YHR165C TUB4P53378 473 aa2.91□□□□□ -1.94
PRP8YHR165C RET3P53600 189 aa2.91□□□□□ -1.94
PRP8YHR165C GSF2Q04697 403 aaKnown RBP2.91□□□□□ -1.94
PRP8YHR165C SEC10Q06245 871 aa2.91□□□□□ -1.94
PRP8YHR165C TFB4Q12004 338 aa2.91□□□□□ -1.94
PRP8YHR165C SEC23P15303 768 aaKnown RBP2.9□□□□□ -1.94
PRP8YHR165C SAR1P20606 190 aaKnown RBP2.9□□□□□ -1.94
PRP8YHR165C LOS1P33418 1100 aaPredicted RBP2.9□□□□□ -1.94
PRP8YHR165C MRPL40P36534 297 aa2.9□□□□□ -1.94
PRP8YHR165C FHL1P39521 936 aa2.9□□□□□ -1.94
PRP8YHR165C ULP2P40537 1034 aaPredicted RBP2.9□□□□□ -1.94
PRP8YHR165C SIP4P46954 829 aa2.9□□□□□ -1.94
PRP8YHR165C JSN1P47135 1091 aaKnown RBP RIP-Chip data2.9□□□□□ -1.94not detected
PRP8YHR165C KEL2P50090 882 aa2.9□□□□□ -1.94
PRP8YHR165C COP1P53622 1201 aaKnown RBP2.9□□□□□ -1.94
PRP8YHR165C SNF12P53628 566 aa2.9□□□□□ -1.94
PRP8YHR165C KRE28Q04431 385 aa2.9□□□□□ -1.94
PRP8YHR165C CIA1Q05583 330 aa2.9□□□□□ -1.94
PRP8YHR165C LCB5Q06147 687 aaKnown RBP2.9□□□□□ -1.94
PRP8YHR165C SPP382Q06411 708 aaPredicted RBP2.9□□□□□ -1.94
PRP8YHR165C NSL1Q12143 216 aa2.9□□□□□ -1.94
PRP8YHR165C HER1Q12276 1246 aa2.9□□□□□ -1.94
PRP8YHR165C NTO1Q12311 748 aa2.9□□□□□ -1.94
PRP8YHR165C SCP160P06105 1222 aaKnown RBP RIP-Chip data2.9□□□□□ -1.94 RIP-Chip
PRP8YHR165C CDC23P16522 626 aa2.9□□□□□ -1.94
PRP8YHR165C ADE2P21264 571 aaKnown RBP2.9□□□□□ -1.94
PRP8YHR165C RDS1P25611 832 aa2.9□□□□□ -1.94
PRP8YHR165C PSO2P30620 661 aa2.9□□□□□ -1.94
PRP8YHR165C BMH2P34730 273 aaKnown RBP2.9□□□□□ -1.94
PRP8YHR165C SLM1P40485 686 aa2.9□□□□□ -1.94
PRP8YHR165C EPL1P43572 832 aa2.9□□□□□ -1.94
PRP8YHR165C HLJ1P48353 224 aa2.9□□□□□ -1.94
PRP8YHR165C IST1P53843 298 aaPredicted RBP2.9□□□□□ -1.94
PRP8YHR165C BUD22Q04347 519 aaKnown RBP2.9□□□□□ -1.94
PRP8YHR165C OCT1P35999 772 aa2.9□□□□□ -1.95
PRP8YHR165C RMA1P36001 430 aaKnown RBP2.9□□□□□ -1.95
PRP8YHR165C RSM22P36056 628 aa2.9□□□□□ -1.95
PRP8YHR165C ATP3P38077 311 aaKnown RBP2.9□□□□□ -1.95
PRP8YHR165C MAM1P40065 302 aa2.9□□□□□ -1.95
PRP8YHR165C CUL3P53202 744 aa2.9□□□□□ -1.95
PRP8YHR165C HOL1P53389 586 aa2.9□□□□□ -1.95
PRP8YHR165C VIP1Q06685 1146 aaKnown RBP2.9□□□□□ -1.95
PRP8YHR165C ARP7Q12406 477 aa2.9□□□□□ -1.95
PRP8YHR165C TUS1Q06412 1307 aa2.9□□□□□ -1.95
PRP8YHR165C OPI1P21957 404 aa2.9□□□□□ -1.95
PRP8YHR165C RAD16P31244 790 aa2.9□□□□□ -1.95
PRP8YHR165C GLG1P36143 616 aa2.9□□□□□ -1.95
PRP8YHR165C YIL089WP40500 205 aa2.9□□□□□ -1.95
PRP8YHR165C SPC105P53148 917 aa2.9□□□□□ -1.95
PRP8YHR165C UBP3Q01477 912 aaKnown RBP RIP-Chip data2.9□□□□□ -1.95not detected
PRP8YHR165C HLR1Q04429 423 aa2.9□□□□□ -1.95
PRP8YHR165C HIM1Q06674 414 aa2.9□□□□□ -1.95
PRP8YHR165C MCM21Q06675 368 aa2.9□□□□□ -1.95
PRP8YHR165C ADK1P07170 222 aaKnown RBP2.9□□□□□ -1.95
PRP8YHR165C CLB4P24871 460 aa2.9□□□□□ -1.95
PRP8YHR165C OLA1P38219 394 aaKnown RBP2.9□□□□□ -1.95
PRP8YHR165C RCK2P38623 610 aa2.9□□□□□ -1.95
PRP8YHR165C UPF3P48412 387 aaKnown RBP2.9□□□□□ -1.95
PRP8YHR165C DIP5P53388 608 aa2.9□□□□□ -1.95
PRP8YHR165C MAK10Q02197 733 aa2.9□□□□□ -1.95
PRP8YHR165C CFT2Q12102 859 aaPredicted RBP2.9□□□□□ -1.95
PRP8YHR165C RAD53P22216 821 aa2.9□□□□□ -1.95
PRP8YHR165C ASF2P32448 525 aaPredicted RBP2.9□□□□□ -1.95
PRP8YHR165C YME2P32843 850 aa2.9□□□□□ -1.95
PRP8YHR165C KDX1P36005 433 aa2.9□□□□□ -1.95
PRP8YHR165C SET3P36124 751 aa2.9□□□□□ -1.95
PRP8YHR165C DAD2P36162 133 aa2.9□□□□□ -1.95
PRP8YHR165C MAK5P38112 773 aaPredicted RBP2.9□□□□□ -1.95
PRP8YHR165C BCD1P38772 366 aa2.9□□□□□ -1.95
PRP8YHR165C YRB1P41920 201 aaKnown RBP2.9□□□□□ -1.95
PRP8YHR165C PXR1P53335 271 aaPredicted RBP2.9□□□□□ -1.95
PRP8YHR165C OMS1Q06668 471 aa2.9□□□□□ -1.95
PRP8YHR165C ULA1Q12059 462 aa2.9□□□□□ -1.95
PRP8YHR165C RGR1P19263 1082 aa2.89□□□□□ -1.95
PRP8YHR165C ACO1P19414 778 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
PRP8YHR165C FMP23P38231 175 aa2.89□□□□□ -1.95
PRP8YHR165C SDS3P40505 327 aa2.89□□□□□ -1.95
PRP8YHR165C LIA1P47120 325 aaKnown RBP2.89□□□□□ -1.95
PRP8YHR165C HST2P53686 357 aa2.89□□□□□ -1.95
PRP8YHR165C RPL22BP56628 122 aaKnown RBP2.89□□□□□ -1.95
PRP8YHR165C RAD33Q04231 177 aa2.89□□□□□ -1.95
PRP8YHR165C ATG13Q06628 738 aa2.89□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms