RNA–Protein interactions for RNA: YDR030C

RAD28, Transcript of Protein involved in DNA repair, yeast

Gene RAD28, Length 1,521 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD28	YDR030C	OCA5	P38738	679 aa		5.1	□□□□□ -1.59
RAD28	YDR030C	VPS8	P39702	1274 aa		5.1	□□□□□ -1.59
RAD28	YDR030C	NEO1	P40527	1151 aa		5.1	□□□□□ -1.59
RAD28	YDR030C	FET4	P40988	552 aa		5.1	□□□□□ -1.59
RAD28	YDR030C	ALD6	P54115	500 aa	Known RBP	5.1	□□□□□ -1.59
RAD28	YDR030C	HAS1	Q03532	505 aa	Known RBP	5.1	□□□□□ -1.59
RAD28	YDR030C	COG4	Q06096	861 aa		5.1	□□□□□ -1.59
RAD28	YDR030C	MCA1	Q08601	432 aa		5.1	□□□□□ -1.59
RAD28	YDR030C	PMD1	P32634	1753 aa		5.1	□□□□□ -1.59
RAD28	YDR030C	FLO1	P32768	1537 aa		5.1	□□□□□ -1.59
RAD28	YDR030C	CDC37	P06101	506 aa	Known RBP	5.09	□□□□□ -1.59
RAD28	YDR030C	PET111	P08468	800 aa		5.09	□□□□□ -1.59
RAD28	YDR030C	PET123	P17558	318 aa		5.09	□□□□□ -1.59
RAD28	YDR030C	RET1	P22276	1149 aa	Known RBP	5.09	□□□□□ -1.59
RAD28	YDR030C	RPL8B	P29453	256 aa	Known RBP	5.09	□□□□□ -1.59
RAD28	YDR030C	HIR1	P32479	840 aa		5.09	□□□□□ -1.59
RAD28	YDR030C	PCH2	P38126	564 aa		5.09	□□□□□ -1.59
RAD28	YDR030C	PIC2	P40035	300 aa		5.09	□□□□□ -1.59
RAD28	YDR030C	LYS14	P40971	790 aa		5.09	□□□□□ -1.59
RAD28	YDR030C	GSM1	P42950	618 aa		5.09	□□□□□ -1.59
RAD28	YDR030C	PRP42	Q03776	544 aa	Known RBP	5.09	□□□□□ -1.59
RAD28	YDR030C	PSR2	Q07949	397 aa		5.09	□□□□□ -1.59
RAD28	YDR030C	KEL3	Q08979	651 aa	Predicted RBP	5.09	□□□□□ -1.59
RAD28	YDR030C	CLF1	Q12309	687 aa	Predicted RBP	5.09	□□□□□ -1.59
RAD28	YDR030C	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
RAD28	YDR030C	THR4	P16120	514 aa	Known RBP	5.08	□□□□□ -1.6
RAD28	YDR030C	YET1	P35723	206 aa		5.08	□□□□□ -1.6
RAD28	YDR030C	BCD1	P38772	366 aa		5.08	□□□□□ -1.6
RAD28	YDR030C	TOM71	P38825	639 aa	Known RBP	5.08	□□□□□ -1.6
RAD28	YDR030C	RTT107	P38850	1070 aa		5.08	□□□□□ -1.6
RAD28	YDR030C	SPT8	P38915	602 aa		5.08	□□□□□ -1.6
RAD28	YDR030C	VAC8	P39968	578 aa		5.08	□□□□□ -1.6
RAD28	YDR030C	APT1	P49435	187 aa	Known RBP	5.08	□□□□□ -1.6
RAD28	YDR030C	YGR237C	P50089	785 aa		5.08	□□□□□ -1.6
RAD28	YDR030C	TY1A-NL1	Q12391	440 aa	Known RBP	5.08	□□□□□ -1.6
RAD28	YDR030C	RRP43	P25359	394 aa	Predicted RBP	5.07	□□□□□ -1.6
RAD28	YDR030C	MRC1	P25588	1096 aa		5.07	□□□□□ -1.6
RAD28	YDR030C	SEC65	P29478	273 aa		5.07	□□□□□ -1.6
RAD28	YDR030C	SQT1	P35184	431 aa		5.07	□□□□□ -1.6
RAD28	YDR030C	MAE1	P36013	669 aa	Known RBP	5.07	□□□□□ -1.6
RAD28	YDR030C	PXL1	P36166	706 aa		5.07	□□□□□ -1.6
RAD28	YDR030C	CTM1	P38818	585 aa		5.07	□□□□□ -1.6
RAD28	YDR030C	STT3	P39007	718 aa	Known RBP	5.07	□□□□□ -1.6
RAD28	YDR030C	CAJ1	P39101	391 aa		5.07	□□□□□ -1.6
RAD28	YDR030C	FYV8	P46949	817 aa	Known RBP	5.07	□□□□□ -1.6
RAD28	YDR030C	RSM26	P47141	266 aa		5.07	□□□□□ -1.6
RAD28	YDR030C	NNF1	P47149	201 aa		5.07	□□□□□ -1.6
RAD28	YDR030C	ARI1	P53111	347 aa	Known RBP	5.07	□□□□□ -1.6
RAD28	YDR030C	ALF1	P53904	254 aa		5.07	□□□□□ -1.6
RAD28	YDR030C	EBS1	Q03466	884 aa	Known RBP	5.07	□□□□□ -1.6
RAD28	YDR030C	VPS38	Q05919	439 aa		5.07	□□□□□ -1.6
RAD28	YDR030C	DSE3	Q08729	430 aa		5.07	□□□□□ -1.6
RAD28	YDR030C	GRX6	Q12438	231 aa		5.07	□□□□□ -1.6
RAD28	YDR030C	SRP54	P20424	541 aa	Known RBP	5.07	□□□□□ -1.6
RAD28	YDR030C	RSC6	P25632	483 aa		5.07	□□□□□ -1.6
RAD28	YDR030C	SAS3	P34218	831 aa		5.07	□□□□□ -1.6
RAD28	YDR030C	UGA2	P38067	497 aa		5.07	□□□□□ -1.6
RAD28	YDR030C	EFM2	P38347	419 aa		5.07	□□□□□ -1.6
RAD28	YDR030C	CCT3	P39077	534 aa	Known RBP	5.07	□□□□□ -1.6
RAD28	YDR030C	PRP31	P49704	494 aa	Predicted RBP	5.07	□□□□□ -1.6
RAD28	YDR030C	UBA2	P52488	636 aa		5.07	□□□□□ -1.6
RAD28	YDR030C	SDA1	P53313	767 aa	Known RBP	5.07	□□□□□ -1.6
RAD28	YDR030C	RET3	P53600	189 aa		5.07	□□□□□ -1.6
RAD28	YDR030C	FOL1	P53848	824 aa		5.07	□□□□□ -1.6
RAD28	YDR030C	MDM1	Q01846	1127 aa		5.07	□□□□□ -1.6
RAD28	YDR030C	VPS30	Q02948	557 aa		5.07	□□□□□ -1.6
RAD28	YDR030C	YPL034W	Q03083	165 aa		5.07	□□□□□ -1.6
RAD28	YDR030C	SMD2	Q06217	110 aa	Known RBP	5.07	□□□□□ -1.6
RAD28	YDR030C	SPP382	Q06411	708 aa	Predicted RBP	5.07	□□□□□ -1.6
RAD28	YDR030C	ACK1	Q07622	623 aa	Predicted RBP	5.07	□□□□□ -1.6
RAD28	YDR030C	SLK19	Q08581	821 aa	Known RBP	5.07	□□□□□ -1.6
RAD28	YDR030C	ATG9	Q12142	997 aa		5.07	□□□□□ -1.6
RAD28	YDR030C	HKR1	P41809	1802 aa		5.06	□□□□□ -1.6
RAD28	YDR030C	QCR6	P00127	147 aa		5.06	□□□□□ -1.6
RAD28	YDR030C	TUF1	P02992	437 aa	Known RBP	5.06	□□□□□ -1.6
RAD28	YDR030C	NUC1	P08466	329 aa		5.06	□□□□□ -1.6
RAD28	YDR030C	ACE2	P21192	770 aa		5.06	□□□□□ -1.6
RAD28	YDR030C	UBC1	P21734	215 aa	Known RBP	5.06	□□□□□ -1.6
RAD28	YDR030C	SPO11	P23179	398 aa		5.06	□□□□□ -1.6
RAD28	YDR030C	STE11	P23561	717 aa		5.06	□□□□□ -1.6
RAD28	YDR030C	PRE8	P23639	250 aa		5.06	□□□□□ -1.6
RAD28	YDR030C	RPS7A	P26786	190 aa	Known RBP	5.06	□□□□□ -1.6
RAD28	YDR030C	PSO2	P30620	661 aa		5.06	□□□□□ -1.6
RAD28	YDR030C	ERT1	P38140	529 aa		5.06	□□□□□ -1.6
RAD28	YDR030C	PES4	P39684	611 aa		5.06	□□□□□ -1.6
RAD28	YDR030C	VTC2	P43585	828 aa		5.06	□□□□□ -1.6
RAD28	YDR030C	AIP1	P46680	615 aa	Known RBP	5.06	□□□□□ -1.6
RAD28	YDR030C	YGR153W	P48238	217 aa		5.06	□□□□□ -1.6
RAD28	YDR030C	CAF130	P53280	1122 aa	Predicted RBP	5.06	□□□□□ -1.6
RAD28	YDR030C	CWC24	P53769	259 aa		5.06	□□□□□ -1.6
RAD28	YDR030C	NOG1	Q02892	647 aa	Known RBP	5.06	□□□□□ -1.6
RAD28	YDR030C	TLG2	Q08144	397 aa		5.06	□□□□□ -1.6
RAD28	YDR030C	HMI1	Q12039	706 aa		5.06	□□□□□ -1.6
RAD28	YDR030C	YOL098C	Q12496	1037 aa		5.06	□□□□□ -1.6
RAD28	YDR030C	FOB1	O13329	566 aa		5.05	□□□□□ -1.6
RAD28	YDR030C	GCR1	P07261	785 aa		5.05	□□□□□ -1.6
RAD28	YDR030C	HTS1	P07263	546 aa	Known RBP	5.05	□□□□□ -1.6
RAD28	YDR030C	CDC34	P14682	295 aa		5.05	□□□□□ -1.6
RAD28	YDR030C	SRM1	P21827	482 aa		5.05	□□□□□ -1.6
RAD28	YDR030C	YKU70	P32807	602 aa		5.05	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 55.8 ms