RNA–Protein interactions for RNA: YCR012W

PGK1, Transcript of 3-phosphoglycerate kinase, yeastyeast

Gene PGK1, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGK1YCR012W EXO5P38289 585 aa6.4□□□□□ -1.38
PGK1YCR012W PEA2P40091 420 aa6.4□□□□□ -1.38
PGK1YCR012W LCB2P40970 561 aa6.4□□□□□ -1.38
PGK1YCR012W TDA10P42938 290 aa6.4□□□□□ -1.38
PGK1YCR012W YMR1P47147 688 aaKnown RBP RIP-Chip data6.4□□□□□ -1.38not detected
PGK1YCR012W SOL4P53315 255 aa6.4□□□□□ -1.38
PGK1YCR012W SUB1P54000 292 aaKnown RBP6.4□□□□□ -1.38
PGK1YCR012W SHR3Q02774 210 aa6.4□□□□□ -1.38
PGK1YCR012W VPS16Q03308 798 aa6.4□□□□□ -1.38
PGK1YCR012W PRP3Q03338 469 aaPredicted RBP6.4□□□□□ -1.38
PGK1YCR012W VPS72Q03388 795 aa6.4□□□□□ -1.38
PGK1YCR012W CWC15Q03772 175 aaKnown RBP6.4□□□□□ -1.38
PGK1YCR012W SRF1Q12516 437 aa6.4□□□□□ -1.38
PGK1YCR012W TY4A-HQ6Q5P6 413 aa6.4□□□□□ -1.38
PGK1YCR012W SPT2P06843 333 aaPredicted RBP6.39□□□□□ -1.39
PGK1YCR012W CDC33P07260 213 aaKnown RBP6.39□□□□□ -1.39
PGK1YCR012W PEP5P12868 1029 aa6.39□□□□□ -1.39
PGK1YCR012W KRS1P15180 591 aaKnown RBP6.39□□□□□ -1.39
PGK1YCR012W PRP22P24384 1145 aaKnown RBP6.39□□□□□ -1.39
PGK1YCR012W DBF4P32325 704 aa6.39□□□□□ -1.39
PGK1YCR012W SUV3P32580 737 aa6.39□□□□□ -1.39
PGK1YCR012W SWI3P32591 825 aa6.39□□□□□ -1.39
PGK1YCR012W PBP2P38151 413 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
PGK1YCR012W SSP1P38871 571 aa6.39□□□□□ -1.39
PGK1YCR012W END3P39013 349 aa6.39□□□□□ -1.39
PGK1YCR012W GPD2P41911 440 aaKnown RBP6.39□□□□□ -1.39
PGK1YCR012W DON1Q05610 365 aa6.39□□□□□ -1.39
PGK1YCR012W MAG2Q06436 670 aaKnown RBP6.39□□□□□ -1.39
PGK1YCR012W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
PGK1YCR012W TYW1Q08960 810 aaKnown RBP6.39□□□□□ -1.39
PGK1YCR012W ACM1Q08981 209 aa6.39□□□□□ -1.39
PGK1YCR012W TOM1Q03280 3268 aa6.39□□□□□ -1.39
PGK1YCR012W FKS1P38631 1876 aaKnown RBP6.39□□□□□ -1.39
PGK1YCR012W GSC2P40989 1895 aa6.39□□□□□ -1.39
PGK1YCR012W TUB2P02557 457 aaKnown RBP6.38□□□□□ -1.39
PGK1YCR012W DBP5P20449 482 aaKnown RBP6.38□□□□□ -1.39
PGK1YCR012W ESS1P22696 170 aa6.38□□□□□ -1.39
PGK1YCR012W YSC83P32792 385 aa6.38□□□□□ -1.39
PGK1YCR012W VPS35P34110 944 aa6.38□□□□□ -1.39
PGK1YCR012W YBL055CP34220 418 aaPredicted RBP6.38□□□□□ -1.39
PGK1YCR012W NCL1P38205 684 aaKnown RBP6.38□□□□□ -1.39
PGK1YCR012W VHC1P38329 1120 aa6.38□□□□□ -1.39
PGK1YCR012W MSG5P38590 489 aa6.38□□□□□ -1.39
PGK1YCR012W TIF4631P39935 952 aaKnown RBP6.38□□□□□ -1.39
PGK1YCR012W YTA12P40341 825 aa6.38□□□□□ -1.39
PGK1YCR012W TMA22P47089 198 aaPredicted RBP6.38□□□□□ -1.39
PGK1YCR012W MTC3P53077 123 aa6.38□□□□□ -1.39
PGK1YCR012W ATG1P53104 897 aa6.38□□□□□ -1.39
PGK1YCR012W LIF1P53150 421 aa6.38□□□□□ -1.39
PGK1YCR012W MDR1P53258 950 aa6.38□□□□□ -1.39
PGK1YCR012W YGR111WP53265 400 aa6.38□□□□□ -1.39
PGK1YCR012W ARK1P53974 638 aa6.38□□□□□ -1.39
PGK1YCR012W ALD6P54115 500 aaKnown RBP6.38□□□□□ -1.39
PGK1YCR012W TFB2Q02939 513 aa6.38□□□□□ -1.39
PGK1YCR012W YPL109CQ02981 657 aa6.38□□□□□ -1.39
PGK1YCR012W HOT1Q03213 719 aa6.38□□□□□ -1.39
PGK1YCR012W ATG16Q03818 150 aa6.38□□□□□ -1.39
PGK1YCR012W CRF1Q04930 467 aa6.38□□□□□ -1.39
PGK1YCR012W PHM6Q05637 104 aa6.38□□□□□ -1.39
PGK1YCR012W LCB5Q06147 687 aaKnown RBP6.38□□□□□ -1.39
PGK1YCR012W YLR177WQ06251 628 aa6.38□□□□□ -1.39
PGK1YCR012W WHI4Q07655 649 aaKnown RBP6.38□□□□□ -1.39
PGK1YCR012W YDL206WQ12424 762 aa6.38□□□□□ -1.39
PGK1YCR012W RKM4Q12504 494 aa6.38□□□□□ -1.39
PGK1YCR012W PGK1P00560 416 aaKnown RBP6.37□□□□□ -1.39
PGK1YCR012W ERG12P07277 443 aa6.37□□□□□ -1.39
PGK1YCR012W TCP1P12612 559 aaKnown RBP6.37□□□□□ -1.39
PGK1YCR012W GAP1P19145 602 aaPredicted RBP6.37□□□□□ -1.39
PGK1YCR012W CAP1P28495 268 aaKnown RBP6.37□□□□□ -1.39
PGK1YCR012W RRN6P32786 894 aa6.37□□□□□ -1.39
PGK1YCR012W UBP11P36026 717 aa6.37□□□□□ -1.39
PGK1YCR012W CCL1P37366 393 aa6.37□□□□□ -1.39
PGK1YCR012W SIC1P38634 284 aa6.37□□□□□ -1.39
PGK1YCR012W UTP7P40055 554 aaKnown RBP6.37□□□□□ -1.39
PGK1YCR012W FIS1P40515 155 aa6.37□□□□□ -1.39
PGK1YCR012W ZIP2P53061 704 aa6.37□□□□□ -1.39
PGK1YCR012W YGR117CP53270 476 aa6.37□□□□□ -1.39
PGK1YCR012W TRM44Q02648 567 aaKnown RBP6.37□□□□□ -1.39
PGK1YCR012W SHE9Q04172 456 aa6.37□□□□□ -1.39
PGK1YCR012W YDR278CQ05612 105 aa6.37□□□□□ -1.39
PGK1YCR012W MPC54Q08550 464 aa6.37□□□□□ -1.39
PGK1YCR012W SLX4Q12098 748 aa6.37□□□□□ -1.39
PGK1YCR012W PHR1P05066 565 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
PGK1YCR012W ILV2P07342 687 aaKnown RBP6.36□□□□□ -1.39
PGK1YCR012W BAS1P22035 811 aa6.36□□□□□ -1.39
PGK1YCR012W MRPL25P23369 157 aa6.36□□□□□ -1.39
PGK1YCR012W PUF4P25339 888 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
PGK1YCR012W GPI10P30777 616 aa6.36□□□□□ -1.39
PGK1YCR012W MVD1P32377 396 aaKnown RBP6.36□□□□□ -1.39
PGK1YCR012W MUD1P32605 298 aaKnown RBP6.36□□□□□ -1.39
PGK1YCR012W MAC1P35192 417 aa6.36□□□□□ -1.39
PGK1YCR012W AVT3P36062 692 aa6.36□□□□□ -1.39
PGK1YCR012W BSD2P38356 321 aa6.36□□□□□ -1.39
PGK1YCR012W YMR134WP40207 237 aa6.36□□□□□ -1.39
PGK1YCR012W VPS70P47161 811 aa6.36□□□□□ -1.39
PGK1YCR012W YJR142WP47173 342 aa6.36□□□□□ -1.39
PGK1YCR012W CLA4P48562 842 aa6.36□□□□□ -1.39
PGK1YCR012W ALR1Q08269 859 aa6.36□□□□□ -1.39
PGK1YCR012W GCR1P07261 785 aa6.35□□□□□ -1.39
PGK1YCR012W YML002WP0CF17 737 aa6.35□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms