RNA–Protein interactions for RNA: YBL066C

SEF1, Transcript of Putative transcription factor, yeast

Gene SEF1, Length 3,447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEF1	YBL066C	BCK1	Q01389	1478 aa		2.68	□□□□□ -1.98
SEF1	YBL066C	MYO4	P32492	1471 aa		2.68	□□□□□ -1.98
SEF1	YBL066C	RFA1	P22336	621 aa	Known RBP	2.68	□□□□□ -1.98
SEF1	YBL066C	STE13	P33894	931 aa		2.68	□□□□□ -1.98
SEF1	YBL066C	BRN1	P38170	754 aa		2.68	□□□□□ -1.98
SEF1	YBL066C	MEF2	P39677	819 aa		2.68	□□□□□ -1.98
SEF1	YBL066C	CEP3	P40969	608 aa		2.68	□□□□□ -1.98
SEF1	YBL066C	GCV2	P49095	1034 aa		2.68	□□□□□ -1.98
SEF1	YBL066C	UGO1	Q03327	502 aa		2.68	□□□□□ -1.98
SEF1	YBL066C	GAS1	P22146	559 aa	Known RBP	2.68	□□□□□ -1.98
SEF1	YBL066C	URA1	P28272	314 aa	Predicted RBP	2.68	□□□□□ -1.98
SEF1	YBL066C	TY4A-J	P47023	414 aa		2.68	□□□□□ -1.98
SEF1	YBL066C	DAM1	P53267	343 aa		2.68	□□□□□ -1.98
SEF1	YBL066C	DUS4	Q06063	367 aa		2.68	□□□□□ -1.98
SEF1	YBL066C	CDA2	Q06703	312 aa		2.68	□□□□□ -1.98
SEF1	YBL066C	POA1	P38218	177 aa		2.67	□□□□□ -1.98
SEF1	YBL066C	PSP2	P50109	593 aa	Known RBP	2.67	□□□□□ -1.98
SEF1	YBL066C	ATP25	Q03153	612 aa		2.67	□□□□□ -1.98
SEF1	YBL066C	MET7	Q08645	548 aa		2.67	□□□□□ -1.98
SEF1	YBL066C	IQG1	Q12280	1495 aa		2.67	□□□□□ -1.98
SEF1	YBL066C	SPE1	P08432	466 aa		2.67	□□□□□ -1.98
SEF1	YBL066C	CDC6	P09119	513 aa		2.67	□□□□□ -1.98
SEF1	YBL066C	VBA3	P25594	458 aa		2.67	□□□□□ -1.98
SEF1	YBL066C	RPD3	P32561	433 aa		2.67	□□□□□ -1.98
SEF1	YBL066C	PEX6	P33760	1030 aa		2.67	□□□□□ -1.98
SEF1	YBL066C	FPR3	P38911	411 aa	Known RBP	2.67	□□□□□ -1.98
SEF1	YBL066C	DSS1	P39112	969 aa		2.67	□□□□□ -1.98
SEF1	YBL066C	PBP1	P53297	722 aa	Known RBP	2.67	□□□□□ -1.98
SEF1	YBL066C	HDA1	P53973	706 aa		2.67	□□□□□ -1.98
SEF1	YBL066C	GCN5	Q03330	439 aa		2.67	□□□□□ -1.98
SEF1	YBL066C	YDR132C	Q03900	495 aa		2.67	□□□□□ -1.98
SEF1	YBL066C	SSL1	Q04673	461 aa	Predicted RBP	2.67	□□□□□ -1.98
SEF1	YBL066C	ADY3	Q07732	790 aa		2.67	□□□□□ -1.98
SEF1	YBL066C	TPO1	Q07824	586 aa		2.67	□□□□□ -1.98
SEF1	YBL066C	RPS13	P05756	151 aa	Known RBP	2.67	□□□□□ -1.98
SEF1	YBL066C	DAL7	P21826	554 aa		2.67	□□□□□ -1.98
SEF1	YBL066C	AIM3	P38266	947 aa	Known RBP	2.67	□□□□□ -1.98
SEF1	YBL066C	TAD1	P53065	400 aa		2.67	□□□□□ -1.98
SEF1	YBL066C	YKR011C	Q02209	353 aa		2.67	□□□□□ -1.98
SEF1	YBL066C	RSC3	Q06639	885 aa		2.67	□□□□□ -1.98
SEF1	YBL066C	CDC9	P04819	755 aa		2.66	□□□□□ -1.98
SEF1	YBL066C	TYE7	P33122	291 aa	Predicted RBP	2.66	□□□□□ -1.98
SEF1	YBL066C	AVT1	P47082	602 aa		2.66	□□□□□ -1.98
SEF1	YBL066C	NOG2	P53742	486 aa	Known RBP	2.66	□□□□□ -1.98
SEF1	YBL066C	VPS30	Q02948	557 aa		2.66	□□□□□ -1.98
SEF1	YBL066C	LRS4	Q04087	347 aa	Known RBP	2.66	□□□□□ -1.98
SEF1	YBL066C	YDR514C	Q04408	483 aa		2.66	□□□□□ -1.98
SEF1	YBL066C	YPL277C	Q08989	487 aa		2.66	□□□□□ -1.98
SEF1	YBL066C	HMI1	Q12039	706 aa		2.66	□□□□□ -1.98
SEF1	YBL066C	NOP14	Q99207	810 aa	Known RBP	2.66	□□□□□ -1.98
SEF1	YBL066C	YCL002C	P25565	263 aa		2.66	□□□□□ -1.98
SEF1	YBL066C	PER1	P25625	357 aa		2.66	□□□□□ -1.98
SEF1	YBL066C	MTC2	P34246	357 aa		2.66	□□□□□ -1.98
SEF1	YBL066C	VMR1	P38735	1592 aa		2.66	□□□□□ -1.98
SEF1	YBL066C	MET12	P46151	657 aa		2.66	□□□□□ -1.98
SEF1	YBL066C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	2.66	□□□□□ -1.98	not detected
SEF1	YBL066C	YOR1	P53049	1477 aa		2.66	□□□□□ -1.98
SEF1	YBL066C	PRP43	P53131	767 aa	Known RBP	2.66	□□□□□ -1.98
SEF1	YBL066C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	2.66	□□□□□ -1.98	not detected
SEF1	YBL066C	REH1	Q06709	432 aa		2.66	□□□□□ -1.98
SEF1	YBL066C	WHI4	Q07655	649 aa	Known RBP	2.66	□□□□□ -1.98
SEF1	YBL066C	GPB1	Q08886	897 aa		2.66	□□□□□ -1.98
SEF1	YBL066C	TSC11	P40061	1430 aa		2.65	□□□□□ -1.98
SEF1	YBL066C	RPS9A	O13516	197 aa	Known RBP	2.65	□□□□□ -1.98
SEF1	YBL066C	GSY1	P23337	708 aa		2.65	□□□□□ -1.98
SEF1	YBL066C	RNQ1	P25367	405 aa		2.65	□□□□□ -1.98
SEF1	YBL066C	EMC1	P25574	760 aa		2.65	□□□□□ -1.98
SEF1	YBL066C	YIL108W	P40483	696 aa	Known RBP	2.65	□□□□□ -1.98
SEF1	YBL066C	YJR142W	P47173	342 aa		2.65	□□□□□ -1.98
SEF1	YBL066C	VPS62	P53285	467 aa		2.65	□□□□□ -1.98
SEF1	YBL066C	RXT3	Q07458	294 aa		2.65	□□□□□ -1.98
SEF1	YBL066C	SOD2	P00447	233 aa		2.65	□□□□□ -1.99
SEF1	YBL066C	CYS3	P31373	394 aa	Known RBP	2.65	□□□□□ -1.99
SEF1	YBL066C	ATG19	P35193	415 aa		2.65	□□□□□ -1.99
SEF1	YBL066C	NIT1	P40447	199 aa		2.65	□□□□□ -1.99
SEF1	YBL066C	SPT20	P50875	604 aa		2.65	□□□□□ -1.99
SEF1	YBL066C	TFB2	Q02939	513 aa		2.65	□□□□□ -1.99
SEF1	YBL066C	YAP6	Q03935	383 aa		2.65	□□□□□ -1.99
SEF1	YBL066C	UTP14	Q04500	899 aa	Known RBP	2.65	□□□□□ -1.99
SEF1	YBL066C	SRD1	P09007	221 aa		2.65	□□□□□ -1.99
SEF1	YBL066C	FBP1	P09201	348 aa		2.65	□□□□□ -1.99
SEF1	YBL066C	RPL8A	P17076	256 aa	Known RBP	2.65	□□□□□ -1.99
SEF1	YBL066C	MCD4	P36051	919 aa		2.65	□□□□□ -1.99
SEF1	YBL066C	URM1	P40554	99 aa	Predicted RBP	2.65	□□□□□ -1.99
SEF1	YBL066C	DNM1	P54861	757 aa		2.65	□□□□□ -1.99
SEF1	YBL066C	HAL9	Q12180	1030 aa		2.65	□□□□□ -1.99
SEF1	YBL066C	HIS5	P07172	385 aa		2.64	□□□□□ -1.99
SEF1	YBL066C	PRP6	P19735	899 aa	Predicted RBP	2.64	□□□□□ -1.99
SEF1	YBL066C	CDC20	P26309	610 aa		2.64	□□□□□ -1.99
SEF1	YBL066C	ELM1	P32801	640 aa		2.64	□□□□□ -1.99
SEF1	YBL066C	ACK1	Q07622	623 aa	Predicted RBP	2.64	□□□□□ -1.99
SEF1	YBL066C	NOP12	Q08208	459 aa	Known RBP	2.64	□□□□□ -1.99
SEF1	YBL066C	YOR022C	Q12204	715 aa		2.64	□□□□□ -1.99
SEF1	YBL066C	YGR161W-C	Q3E744	92 aa		2.64	□□□□□ -1.99
SEF1	YBL066C	YBR182C-A	Q8TGU6	64 aa		2.64	□□□□□ -1.99
SEF1	YBL066C	CAF16	P43569	289 aa		2.64	□□□□□ -1.99
SEF1	YBL066C	HXT16	P47185	567 aa		2.64	□□□□□ -1.99
SEF1	YBL066C	RIM8	P53179	542 aa		2.64	□□□□□ -1.99
SEF1	YBL066C	POL1	P13382	1468 aa		2.64	□□□□□ -1.99
SEF1	YBL066C	ADR1	P07248	1323 aa		2.64	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 109.3 ms