RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeast

Gene ECM1, Length 639 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM1	YAL059W	ENA2	Q01896	1091 aa		5.87	□□□□□ -1.47
ECM1	YAL059W	BUL2	Q03758	920 aa	Known RBP	5.87	□□□□□ -1.47
ECM1	YAL059W	YPR196W	Q06595	470 aa		5.87	□□□□□ -1.47
ECM1	YAL059W	CDA1	Q06702	301 aa		5.87	□□□□□ -1.47
ECM1	YAL059W	ENA5	Q12691	1091 aa		5.87	□□□□□ -1.47
ECM1	YAL059W	HBN1	Q96VH4	193 aa		5.87	□□□□□ -1.47
ECM1	YAL059W	MSD1	P15179	658 aa	Known RBP	5.86	□□□□□ -1.47
ECM1	YAL059W	CDC48	P25694	835 aa	Known RBP	5.86	□□□□□ -1.47
ECM1	YAL059W	APL2	P36000	726 aa	Predicted RBP	5.86	□□□□□ -1.47
ECM1	YAL059W	YBR071W	P38243	211 aa		5.86	□□□□□ -1.47
ECM1	YAL059W	TOK1	P40310	691 aa		5.86	□□□□□ -1.47
ECM1	YAL059W	FAF1	P40546	346 aa	Predicted RBP	5.86	□□□□□ -1.47
ECM1	YAL059W	TAF1	P46677	1066 aa		5.86	□□□□□ -1.47
ECM1	YAL059W	SRB7	P47822	140 aa		5.86	□□□□□ -1.47
ECM1	YAL059W	SPT20	P50875	604 aa		5.86	□□□□□ -1.47
ECM1	YAL059W	RTA1	P53047	317 aa		5.86	□□□□□ -1.47
ECM1	YAL059W	PBP1	P53297	722 aa	Known RBP	5.86	□□□□□ -1.47
ECM1	YAL059W	YNL034W	P53963	612 aa		5.86	□□□□□ -1.47
ECM1	YAL059W	YNL018C	P53976	612 aa		5.86	□□□□□ -1.47
ECM1	YAL059W	MET14	Q02196	202 aa		5.86	□□□□□ -1.47
ECM1	YAL059W	TAF8	Q03750	510 aa		5.86	□□□□□ -1.47
ECM1	YAL059W	SXM1	Q04175	944 aa	Known RBP	5.86	□□□□□ -1.47
ECM1	YAL059W	LCD1	Q04377	747 aa		5.86	□□□□□ -1.47
ECM1	YAL059W	DUS4	Q06063	367 aa		5.86	□□□□□ -1.47
ECM1	YAL059W	GRC3	Q07845	632 aa		5.86	□□□□□ -1.47
ECM1	YAL059W	TRE2	Q08693	809 aa		5.86	□□□□□ -1.47
ECM1	YAL059W	TOP3	P13099	656 aa		5.85	□□□□□ -1.47
ECM1	YAL059W	EUG1	P32474	517 aa		5.85	□□□□□ -1.47
ECM1	YAL059W	TOD6	P34219	525 aa		5.85	□□□□□ -1.47
ECM1	YAL059W	THI80	P35202	319 aa		5.85	□□□□□ -1.47
ECM1	YAL059W	EXO84	P38261	753 aa		5.85	□□□□□ -1.47
ECM1	YAL059W	NDE1	P40215	560 aa		5.85	□□□□□ -1.47
ECM1	YAL059W	GCV2	P49095	1034 aa		5.85	□□□□□ -1.47
ECM1	YAL059W	HSV2	P50079	448 aa	Predicted RBP	5.85	□□□□□ -1.47
ECM1	YAL059W	GPG1	P53130	126 aa		5.85	□□□□□ -1.47
ECM1	YAL059W	YGR012W	P53206	393 aa		5.85	□□□□□ -1.47
ECM1	YAL059W	YNL193W	P53870	558 aa		5.85	□□□□□ -1.47
ECM1	YAL059W	TSR2	Q06672	205 aa	Known RBP	5.85	□□□□□ -1.47
ECM1	YAL059W	YDL124W	Q07551	312 aa	Known RBP	5.85	□□□□□ -1.47
ECM1	YAL059W	PSR2	Q07949	397 aa		5.85	□□□□□ -1.47
ECM1	YAL059W	GPB1	Q08886	897 aa		5.85	□□□□□ -1.47
ECM1	YAL059W	YPR071W	Q12346	211 aa		5.85	□□□□□ -1.47
ECM1	YAL059W	CDC6	P09119	513 aa		5.84	□□□□□ -1.47
ECM1	YAL059W	RPC82	P32349	654 aa		5.84	□□□□□ -1.47
ECM1	YAL059W	PET10	P36139	283 aa		5.84	□□□□□ -1.47
ECM1	YAL059W	YBR238C	P38330	731 aa	Known RBP	5.84	□□□□□ -1.47
ECM1	YAL059W	RIM4	P38741	713 aa		5.84	□□□□□ -1.47
ECM1	YAL059W	UBP5	P39944	805 aa		5.84	□□□□□ -1.47
ECM1	YAL059W	CCM1	P48237	864 aa	Predicted RBP	5.84	□□□□□ -1.47
ECM1	YAL059W	UBA2	P52488	636 aa		5.84	□□□□□ -1.47
ECM1	YAL059W	YKE2	P52553	114 aa		5.84	□□□□□ -1.47
ECM1	YAL059W	SDA1	P53313	767 aa	Known RBP	5.84	□□□□□ -1.47
ECM1	YAL059W	SPC19	Q03954	165 aa		5.84	□□□□□ -1.47
ECM1	YAL059W	TPO1	Q07824	586 aa		5.84	□□□□□ -1.47
ECM1	YAL059W	HSF1	P10961	833 aa		5.83	□□□□□ -1.48
ECM1	YAL059W	EMC1	P25574	760 aa		5.83	□□□□□ -1.48
ECM1	YAL059W	PTP2	P29461	750 aa		5.83	□□□□□ -1.48
ECM1	YAL059W	PLC1	P32383	869 aa		5.83	□□□□□ -1.48
ECM1	YAL059W	TFC4	P33339	1025 aa		5.83	□□□□□ -1.48
ECM1	YAL059W	BET3	P36149	193 aa		5.83	□□□□□ -1.48
ECM1	YAL059W	YAP6	Q03935	383 aa		5.83	□□□□□ -1.48
ECM1	YAL059W	VIP1	Q06685	1146 aa	Known RBP	5.83	□□□□□ -1.48
ECM1	YAL059W	RXT3	Q07458	294 aa		5.83	□□□□□ -1.48
ECM1	YAL059W	HMI1	Q12039	706 aa		5.83	□□□□□ -1.48
ECM1	YAL059W	GAL1	P04385	528 aa		5.82	□□□□□ -1.48
ECM1	YAL059W	CDC31	P06704	161 aa	Known RBP	5.82	□□□□□ -1.48
ECM1	YAL059W	SPE1	P08432	466 aa		5.82	□□□□□ -1.48
ECM1	YAL059W	SCT1	P32784	759 aa		5.82	□□□□□ -1.48
ECM1	YAL059W	POA1	P38218	177 aa		5.82	□□□□□ -1.48
ECM1	YAL059W	VPS62	P53285	467 aa		5.82	□□□□□ -1.48
ECM1	YAL059W	YML131W	Q03102	365 aa		5.82	□□□□□ -1.48
ECM1	YAL059W	ADY3	Q07732	790 aa		5.82	□□□□□ -1.48
ECM1	YAL059W	RRP6	Q12149	733 aa	Known RBP	5.82	□□□□□ -1.48
ECM1	YAL059W	VPS5	Q92331	675 aa		5.82	□□□□□ -1.48
ECM1	YAL059W	YOL087C	Q99247	1116 aa		5.82	□□□□□ -1.48
ECM1	YAL059W	TOM70	P07213	617 aa	Known RBP	5.81	□□□□□ -1.48
ECM1	YAL059W	CDC20	P26309	610 aa		5.81	□□□□□ -1.48
ECM1	YAL059W	REC104	P33323	182 aa		5.81	□□□□□ -1.48
ECM1	YAL059W	GDH3	P39708	457 aa		5.81	□□□□□ -1.48
ECM1	YAL059W	MNT3	P40549	630 aa		5.81	□□□□□ -1.48
ECM1	YAL059W	UBP6	P43593	499 aa	Known RBP	5.81	□□□□□ -1.48
ECM1	YAL059W	HFD1	Q04458	532 aa		5.81	□□□□□ -1.48
ECM1	YAL059W	ACK1	Q07622	623 aa	Predicted RBP	5.81	□□□□□ -1.48
ECM1	YAL059W	NOT3	P06102	836 aa	Known RBP	5.8	□□□□□ -1.48
ECM1	YAL059W	DOM34	P33309	386 aa		5.8	□□□□□ -1.48
ECM1	YAL059W	TYS1	P36421	394 aa	Known RBP	5.8	□□□□□ -1.48
ECM1	YAL059W	PSP2	P50109	593 aa	Known RBP	5.8	□□□□□ -1.48
ECM1	YAL059W	RAI1	P53063	387 aa	Known RBP	5.8	□□□□□ -1.48
ECM1	YAL059W	REH1	Q06709	432 aa		5.8	□□□□□ -1.48
ECM1	YAL059W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.79	□□□□□ -1.48	not detected
ECM1	YAL059W	NIC96	P34077	839 aa		5.79	□□□□□ -1.48
ECM1	YAL059W	RRN3	P36070	627 aa		5.79	□□□□□ -1.48
ECM1	YAL059W	DSS1	P39112	969 aa		5.79	□□□□□ -1.48
ECM1	YAL059W	DOT6	P40059	670 aa	Known RBP	5.79	□□□□□ -1.48
ECM1	YAL059W	VTC2	P43585	828 aa		5.79	□□□□□ -1.48
ECM1	YAL059W	MET12	P46151	657 aa		5.79	□□□□□ -1.48
ECM1	YAL059W	RSC1	P53236	928 aa		5.79	□□□□□ -1.48
ECM1	YAL059W	YLR352W	Q06479	807 aa		5.79	□□□□□ -1.48
ECM1	YAL059W	HOM3	P10869	527 aa		5.78	□□□□□ -1.48
ECM1	YAL059W	CHS3	P29465	1165 aa		5.78	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms