RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeastyeast

Gene ECM1, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM1YAL059W MTC1P47018 478 aaKnown RBP15.08■□□□□ 0
ECM1YAL059W DRS1P32892 752 aaKnown RBP14.88□□□□□ -0.03
ECM1YAL059W BFR2Q06631 534 aaKnown RBP12.76□□□□□ -0.37
ECM1YAL059W DIP2Q12220 943 aaPredicted RBP12.75□□□□□ -0.37
ECM1YAL059W FAP1P53971 965 aa12.68□□□□□ -0.38
ECM1YAL059W AVT3P36062 692 aa12.52□□□□□ -0.41
ECM1YAL059W ISW2Q08773 1120 aa12.32□□□□□ -0.44
ECM1YAL059W PRI1P10363 409 aa12.26□□□□□ -0.45
ECM1YAL059W RPG1P38249 964 aaKnown RBP12.17□□□□□ -0.46
ECM1YAL059W RSE1Q04693 1361 aaKnown RBP12.11□□□□□ -0.47
ECM1YAL059W AAD16Q02895 342 aa12.08□□□□□ -0.48
ECM1YAL059W PRY3P47033 881 aa11.89□□□□□ -0.51
ECM1YAL059W TFA1P36100 482 aa11.8□□□□□ -0.52
ECM1YAL059W RPL17AP05740 184 aaKnown RBP11.68□□□□□ -0.54
ECM1YAL059W RPL17BP46990 184 aaKnown RBP11.68□□□□□ -0.54
ECM1YAL059W TSR3Q12094 313 aaKnown RBP11.65□□□□□ -0.54
ECM1YAL059W REB1P21538 810 aa11.56□□□□□ -0.56
ECM1YAL059W YCK3P39962 524 aa11.26□□□□□ -0.61
ECM1YAL059W SPT21P35209 758 aa11.25□□□□□ -0.61
ECM1YAL059W MRPL32P25348 183 aa11.17□□□□□ -0.62
ECM1YAL059W HAA1Q12753 694 aaKnown RBP11.17□□□□□ -0.62
ECM1YAL059W RIM101P33400 625 aa11□□□□□ -0.65
ECM1YAL059W YKR023WP36119 530 aaKnown RBP10.93□□□□□ -0.66
ECM1YAL059W CDC27P38042 758 aa10.77□□□□□ -0.69
ECM1YAL059W HOP09932 586 aa10.71□□□□□ -0.69
ECM1YAL059W TFC8Q12308 588 aa10.7□□□□□ -0.7
ECM1YAL059W OXP1P28273 1286 aa10.67□□□□□ -0.7
ECM1YAL059W DCD1P06773 312 aa10.65□□□□□ -0.7
ECM1YAL059W PTP3P40048 928 aa10.49□□□□□ -0.73
ECM1YAL059W YIL055CP40523 627 aaKnown RBP10.49□□□□□ -0.73
ECM1YAL059W YAH1Q12184 172 aaKnown RBP10.49□□□□□ -0.73
ECM1YAL059W YGL015CP33199 130 aa10.46□□□□□ -0.73
ECM1YAL059W SSP1P38871 571 aa10.39□□□□□ -0.75
ECM1YAL059W BCH2P36122 765 aa10.38□□□□□ -0.75
ECM1YAL059W UBP10P53874 792 aaPredicted RBP10.36□□□□□ -0.75
ECM1YAL059W MAP2P38174 421 aaKnown RBP10.35□□□□□ -0.75
ECM1YAL059W RSM7P47150 247 aa10.34□□□□□ -0.75
ECM1YAL059W YLR271WQ06152 274 aa10.32□□□□□ -0.76
ECM1YAL059W SCY1P53009 804 aa10.29□□□□□ -0.76
ECM1YAL059W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.26□□□□□ -0.77not detected
ECM1YAL059W AI2P03876 854 aa10.2□□□□□ -0.78
ECM1YAL059W EPS1P40557 701 aa10.2□□□□□ -0.78
ECM1YAL059W BBC1P47068 1157 aa10.15□□□□□ -0.78
ECM1YAL059W BDF1P35817 686 aa10.12□□□□□ -0.79
ECM1YAL059W SLX5P32828 619 aaKnown RBP10.09□□□□□ -0.79
ECM1YAL059W PSD2P53037 1138 aaKnown RBP10.09□□□□□ -0.79
ECM1YAL059W MGA2P40578 1113 aa10.05□□□□□ -0.8
ECM1YAL059W CST9Q06032 482 aa10.01□□□□□ -0.81
ECM1YAL059W TIF4632P39936 914 aaKnown RBP9.92□□□□□ -0.82
ECM1YAL059W MRM1P25270 412 aa9.88□□□□□ -0.83
ECM1YAL059W TGL3P40308 642 aa9.84□□□□□ -0.83
ECM1YAL059W RTG3P38165 486 aa9.71□□□□□ -0.86
ECM1YAL059W RCR1P38212 213 aa9.7□□□□□ -0.86
ECM1YAL059W NSR1P27476 414 aaKnown RBP RIP-Chip data9.67□□□□□ -0.86 RIP-Chip
ECM1YAL059W RQC2Q12532 1038 aaKnown RBP9.66□□□□□ -0.86
ECM1YAL059W VPS29P38759 282 aa9.63□□□□□ -0.87
ECM1YAL059W DMA1P38823 416 aa9.62□□□□□ -0.87
ECM1YAL059W RAM2P29703 316 aa9.61□□□□□ -0.87
ECM1YAL059W YAP5P40574 245 aa9.61□□□□□ -0.87
ECM1YAL059W YMR1P47147 688 aaKnown RBP RIP-Chip data9.57□□□□□ -0.88not detected
ECM1YAL059W YOR238WQ08634 303 aa9.57□□□□□ -0.88
ECM1YAL059W STS1P38637 319 aa9.52□□□□□ -0.89
ECM1YAL059W MST1P07236 462 aa9.51□□□□□ -0.89
ECM1YAL059W DBP1P24784 617 aaKnown RBP9.51□□□□□ -0.89
ECM1YAL059W YFR006WP43590 535 aa9.51□□□□□ -0.89
ECM1YAL059W PIB1Q06651 286 aa9.51□□□□□ -0.89
ECM1YAL059W MAK11P20484 414 aaKnown RBP9.47□□□□□ -0.89
ECM1YAL059W GTT3P39996 337 aa9.39□□□□□ -0.91
ECM1YAL059W VMA1P17255 1071 aaKnown RBP9.36□□□□□ -0.91
ECM1YAL059W COQ8P27697 501 aa9.34□□□□□ -0.91
ECM1YAL059W MIF2P35201 549 aa9.33□□□□□ -0.92
ECM1YAL059W SET1P38827 1080 aaKnown RBP9.32□□□□□ -0.92
ECM1YAL059W EDS1P38073 919 aa9.31□□□□□ -0.92
ECM1YAL059W UBP9P39967 754 aa9.3□□□□□ -0.92
ECM1YAL059W YBL029C-AQ3E756 94 aa9.28□□□□□ -0.92
ECM1YAL059W WSC3Q12215 556 aa9.27□□□□□ -0.93
ECM1YAL059W BUD31P25337 157 aaPredicted RBP9.26□□□□□ -0.93
ECM1YAL059W SAM3Q08986 587 aa9.26□□□□□ -0.93
ECM1YAL059W PTC3P34221 468 aaKnown RBP9.23□□□□□ -0.93
ECM1YAL059W TAF7Q05021 590 aa9.23□□□□□ -0.93
ECM1YAL059W YOL036WQ08206 761 aa9.23□□□□□ -0.93
ECM1YAL059W NOP53Q12080 455 aaKnown RBP9.21□□□□□ -0.94
ECM1YAL059W VNX1P42839 908 aa9.2□□□□□ -0.94
ECM1YAL059W SET4P42948 560 aa9.19□□□□□ -0.94
ECM1YAL059W SAS10Q12136 610 aaPredicted RBP9.18□□□□□ -0.94
ECM1YAL059W MSB4Q12317 492 aa9.17□□□□□ -0.94
ECM1YAL059W GYP5Q12344 894 aa9.17□□□□□ -0.94
ECM1YAL059W YPR148CQ06523 435 aa9.16□□□□□ -0.94
ECM1YAL059W GRE2Q12068 342 aaKnown RBP9.16□□□□□ -0.94
ECM1YAL059W IFH1P39520 1085 aa9.15□□□□□ -0.94
ECM1YAL059W ATH1P48016 1211 aa9.14□□□□□ -0.95
ECM1YAL059W SPP1Q03012 353 aa9.13□□□□□ -0.95
ECM1YAL059W ABP1P15891 592 aaKnown RBP9.11□□□□□ -0.95
ECM1YAL059W TIF11P38912 153 aaKnown RBP9.11□□□□□ -0.95
ECM1YAL059W GUT1P32190 709 aa9.1□□□□□ -0.95
ECM1YAL059W VPS70P47161 811 aa9.1□□□□□ -0.95
ECM1YAL059W DCW1P36091 449 aa9.09□□□□□ -0.95
ECM1YAL059W EAP1P36041 632 aaKnown RBP9.08□□□□□ -0.96
ECM1YAL059W ULI1P43604 169 aa9.06□□□□□ -0.96
ECM1YAL059W HTA1P04911 132 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms