RNA–Protein interactions for RNA: YPL176C

TRE1, Transcript of Transferrin receptor-like protein, yeastyeast

Gene TRE1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRE1YPL176C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
TRE1YPL176C SMC6Q12749 1114 aa5.07□□□□□ -1.6
TRE1YPL176C SAC3P46674 1301 aa5.07□□□□□ -1.6
TRE1YPL176C SPT6P23615 1451 aaKnown RBP5.07□□□□□ -1.6
TRE1YPL176C MET8P15807 274 aa5.07□□□□□ -1.6
TRE1YPL176C AAC3P18238 307 aa5.07□□□□□ -1.6
TRE1YPL176C RER1P25560 188 aa5.07□□□□□ -1.6
TRE1YPL176C MRPL16P38064 232 aa5.07□□□□□ -1.6
TRE1YPL176C TAN1P53072 289 aaPredicted RBP5.07□□□□□ -1.6
TRE1YPL176C MRL1Q06815 381 aa5.07□□□□□ -1.6
TRE1YPL176C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
TRE1YPL176C TOP3P13099 656 aa5.06□□□□□ -1.6
TRE1YPL176C KAR2P16474 682 aaKnown RBP5.06□□□□□ -1.6
TRE1YPL176C ORC2P32833 620 aa5.06□□□□□ -1.6
TRE1YPL176C SRP72P38688 640 aaKnown RBP5.06□□□□□ -1.6
TRE1YPL176C APM2P38700 605 aa5.06□□□□□ -1.6
TRE1YPL176C CCC2P38995 1004 aa5.06□□□□□ -1.6
TRE1YPL176C YIL165CP40446 119 aa5.06□□□□□ -1.6
TRE1YPL176C GCD10P41814 478 aa5.06□□□□□ -1.6
TRE1YPL176C YJR096WP47137 282 aa5.06□□□□□ -1.6
TRE1YPL176C GCR2Q01722 534 aa5.06□□□□□ -1.6
TRE1YPL176C RAD33Q04231 177 aa5.06□□□□□ -1.6
TRE1YPL176C YLR225CQ05948 407 aaKnown RBP5.06□□□□□ -1.6
TRE1YPL176C YLH47Q06493 454 aa5.06□□□□□ -1.6
TRE1YPL176C SWA2Q06677 668 aa5.06□□□□□ -1.6
TRE1YPL176C ILS1P09436 1072 aaKnown RBP5.06□□□□□ -1.6
TRE1YPL176C PET123P17558 318 aa5.06□□□□□ -1.6
TRE1YPL176C RPC53P25441 422 aa5.06□□□□□ -1.6
TRE1YPL176C MET22P32179 357 aa5.06□□□□□ -1.6
TRE1YPL176C OAF1P39720 1047 aaPredicted RBP5.06□□□□□ -1.6
TRE1YPL176C IRC6P43615 237 aa5.06□□□□□ -1.6
TRE1YPL176C YGR250CP53316 781 aaKnown RBP5.06□□□□□ -1.6
TRE1YPL176C MRPL19P53875 158 aa5.06□□□□□ -1.6
TRE1YPL176C ALF1P53904 254 aa5.06□□□□□ -1.6
TRE1YPL176C NCS2P53923 493 aaPredicted RBP5.06□□□□□ -1.6
TRE1YPL176C ZDS2P54786 942 aa5.06□□□□□ -1.6
TRE1YPL176C HOT1Q03213 719 aa5.06□□□□□ -1.6
TRE1YPL176C MDM38Q08179 573 aa5.06□□□□□ -1.6
TRE1YPL176C RET1P22276 1149 aaKnown RBP5.05□□□□□ -1.6
TRE1YPL176C PCL2P25693 308 aa5.05□□□□□ -1.6
TRE1YPL176C DUR3P33413 735 aa5.05□□□□□ -1.6
TRE1YPL176C NIP100P33420 868 aa5.05□□□□□ -1.6
TRE1YPL176C LEM3P42838 414 aa5.05□□□□□ -1.6
TRE1YPL176C YJL055WP47044 245 aa5.05□□□□□ -1.6
TRE1YPL176C MDE1P47095 244 aa5.05□□□□□ -1.6
TRE1YPL176C PCL10P53124 433 aa5.05□□□□□ -1.6
TRE1YPL176C SCW11P53189 542 aa5.05□□□□□ -1.6
TRE1YPL176C YLR346CQ06139 101 aa5.05□□□□□ -1.6
TRE1YPL176C ADY3Q07732 790 aa5.05□□□□□ -1.6
TRE1YPL176C SMF3Q12078 473 aaPredicted RBP5.05□□□□□ -1.6
TRE1YPL176C ENT1Q12518 454 aa5.05□□□□□ -1.6
TRE1YPL176C HBN1Q96VH4 193 aa5.05□□□□□ -1.6
TRE1YPL176C GFA1P14742 717 aaKnown RBP5.05□□□□□ -1.6
TRE1YPL176C PFK1P16861 987 aaKnown RBP5.05□□□□□ -1.6
TRE1YPL176C REC107P21651 314 aa5.05□□□□□ -1.6
TRE1YPL176C HEM12P32347 362 aaPredicted RBP5.05□□□□□ -1.6
TRE1YPL176C PRP19P32523 503 aaKnown RBP5.05□□□□□ -1.6
TRE1YPL176C PSY4P38193 441 aa5.05□□□□□ -1.6
TRE1YPL176C NOP16P40007 231 aaKnown RBP5.05□□□□□ -1.6
TRE1YPL176C SET2P46995 733 aaKnown RBP5.05□□□□□ -1.6
TRE1YPL176C RNR4P49723 345 aaKnown RBP5.05□□□□□ -1.6
TRE1YPL176C NUT1P53114 1132 aa5.05□□□□□ -1.6
TRE1YPL176C TIM10P87108 93 aa5.05□□□□□ -1.6
TRE1YPL176C RAT1Q02792 1006 aaKnown RBP5.05□□□□□ -1.6
TRE1YPL176C FLP1P03870 423 aa5.04□□□□□ -1.6
TRE1YPL176C RPC40P07703 335 aaKnown RBP5.04□□□□□ -1.6
TRE1YPL176C PHO81P17442 1178 aa5.04□□□□□ -1.6
TRE1YPL176C SRO9P25567 434 aaKnown RBP5.04□□□□□ -1.6
TRE1YPL176C MSC7P38694 644 aa5.04□□□□□ -1.6
TRE1YPL176C AIM46P38885 310 aa5.04□□□□□ -1.6
TRE1YPL176C AXL1P40851 1208 aa5.04□□□□□ -1.6
TRE1YPL176C SBE2P42223 864 aaKnown RBP5.04□□□□□ -1.6
TRE1YPL176C XKS1P42826 600 aa5.04□□□□□ -1.6
TRE1YPL176C RIA1P53893 1110 aa5.04□□□□□ -1.6
TRE1YPL176C SYF1Q04048 859 aaPredicted RBP5.04□□□□□ -1.6
TRE1YPL176C YTM1Q12024 460 aaPredicted RBP5.04□□□□□ -1.6
TRE1YPL176C TAH18Q12181 623 aa5.04□□□□□ -1.6
TRE1YPL176C SEC18P18759 758 aaKnown RBP5.04□□□□□ -1.6
TRE1YPL176C CMK1P27466 446 aaKnown RBP5.04□□□□□ -1.6
TRE1YPL176C SWC3P31376 625 aa5.04□□□□□ -1.6
TRE1YPL176C PAH1P32567 862 aa5.04□□□□□ -1.6
TRE1YPL176C RAD17P48581 401 aa5.04□□□□□ -1.6
TRE1YPL176C YDR444WQ04093 687 aa5.04□□□□□ -1.6
TRE1YPL176C CUE5Q08412 411 aaKnown RBP5.04□□□□□ -1.6
TRE1YPL176C REX3Q12090 404 aa5.04□□□□□ -1.6
TRE1YPL176C YCF1P39109 1515 aaKnown RBP5.03□□□□□ -1.6
TRE1YPL176C STF1P01098 86 aa5.03□□□□□ -1.6
TRE1YPL176C CDC9P04819 755 aa5.03□□□□□ -1.6
TRE1YPL176C SRD1P09007 221 aa5.03□□□□□ -1.6
TRE1YPL176C PRP9P19736 530 aaKnown RBP5.03□□□□□ -1.6
TRE1YPL176C TFB1P32776 642 aa5.03□□□□□ -1.6
TRE1YPL176C HXT13P39924 564 aa5.03□□□□□ -1.6
TRE1YPL176C HXT17P53631 564 aa5.03□□□□□ -1.6
TRE1YPL176C HXT15P54854 567 aa5.03□□□□□ -1.6
TRE1YPL176C TY1A-MR1Q04215 440 aa5.03□□□□□ -1.6
TRE1YPL176C PGA3Q12746 312 aaKnown RBP5.03□□□□□ -1.6
TRE1YPL176C HIR3P47171 1648 aa5.03□□□□□ -1.6
TRE1YPL176C SES1P07284 462 aaKnown RBP5.02□□□□□ -1.61
TRE1YPL176C VMA2P16140 517 aaKnown RBP5.02□□□□□ -1.61
TRE1YPL176C TRX1P22217 103 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms