RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C PUS9Q12069 462 aa2.41□□□□□ -2.02
NIP100YPL174C CDC6P09119 513 aa2.41□□□□□ -2.02
NIP100YPL174C URA1P28272 314 aaPredicted RBP2.41□□□□□ -2.02
NIP100YPL174C SRP40P32583 406 aaPredicted RBP2.41□□□□□ -2.02
NIP100YPL174C RSC3Q06639 885 aa2.41□□□□□ -2.02
NIP100YPL174C MSD1P15179 658 aaKnown RBP2.4□□□□□ -2.02
NIP100YPL174C RPL8BP29453 256 aaKnown RBP2.4□□□□□ -2.02
NIP100YPL174C PZF1P39933 429 aa2.4□□□□□ -2.02
NIP100YPL174C YJL049WP47048 450 aa2.4□□□□□ -2.02
NIP100YPL174C NNF1P47149 201 aa2.4□□□□□ -2.02
NIP100YPL174C PKH1Q03407 766 aa2.4□□□□□ -2.02
NIP100YPL174C YMR206WQ03695 313 aa2.4□□□□□ -2.02
NIP100YPL174C PMA1P05030 918 aaKnown RBP2.4□□□□□ -2.03
NIP100YPL174C PHR1P05066 565 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
NIP100YPL174C STE5P32917 917 aa2.4□□□□□ -2.03
NIP100YPL174C UTP8P53276 713 aaKnown RBP2.4□□□□□ -2.03
NIP100YPL174C NOG2P53742 486 aaKnown RBP2.4□□□□□ -2.03
NIP100YPL174C TIM44Q01852 431 aa2.4□□□□□ -2.03
NIP100YPL174C YDR514CQ04408 483 aa2.4□□□□□ -2.03
NIP100YPL174C SSL1Q04673 461 aaPredicted RBP2.4□□□□□ -2.03
NIP100YPL174C DAL7P21826 554 aa2.39□□□□□ -2.03
NIP100YPL174C KAR4P25583 335 aa2.39□□□□□ -2.03
NIP100YPL174C CYS3P31373 394 aaKnown RBP2.39□□□□□ -2.03
NIP100YPL174C EFT1P32324 842 aaKnown RBP2.39□□□□□ -2.03
NIP100YPL174C PET10P36139 283 aa2.39□□□□□ -2.03
NIP100YPL174C STU2P46675 888 aa2.39□□□□□ -2.03
NIP100YPL174C YKR011CQ02209 353 aa2.39□□□□□ -2.03
NIP100YPL174C YOR022CQ12204 715 aa2.39□□□□□ -2.03
NIP100YPL174C YKL091CP33324 310 aaKnown RBP2.39□□□□□ -2.03
NIP100YPL174C YHR078WP38799 552 aa2.39□□□□□ -2.03
NIP100YPL174C GGA2P38817 585 aaKnown RBP2.39□□□□□ -2.03
NIP100YPL174C HUL5P53119 910 aa2.39□□□□□ -2.03
NIP100YPL174C REH1Q06709 432 aa2.39□□□□□ -2.03
NIP100YPL174C HBN1Q96VH4 193 aa2.39□□□□□ -2.03
NIP100YPL174C MSS4P38994 779 aa2.38□□□□□ -2.03
NIP100YPL174C SIT1P39980 628 aa2.38□□□□□ -2.03
NIP100YPL174C CHA4P43634 648 aa2.38□□□□□ -2.03
NIP100YPL174C DAM1P53267 343 aa2.38□□□□□ -2.03
NIP100YPL174C ENB1Q08299 606 aa2.38□□□□□ -2.03
NIP100YPL174C FLC1Q08967 793 aa2.38□□□□□ -2.03
NIP100YPL174C UPC2Q12151 913 aa2.38□□□□□ -2.03
NIP100YPL174C HBS1P32769 611 aaKnown RBP2.38□□□□□ -2.03
NIP100YPL174C FKH2P41813 862 aa2.38□□□□□ -2.03
NIP100YPL174C EXG2P52911 562 aa2.38□□□□□ -2.03
NIP100YPL174C DCG1P32460 244 aa2.38□□□□□ -2.03
NIP100YPL174C SDP1P40479 209 aa2.38□□□□□ -2.03
NIP100YPL174C ALG2P43636 503 aa2.38□□□□□ -2.03
NIP100YPL174C MTR3P48240 250 aaPredicted RBP2.38□□□□□ -2.03
NIP100YPL174C NCS6P53088 359 aa2.38□□□□□ -2.03
NIP100YPL174C NPL3Q01560 414 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
NIP100YPL174C KIN4Q01919 800 aa2.38□□□□□ -2.03
NIP100YPL174C DIF1O13577 133 aa2.37□□□□□ -2.03
NIP100YPL174C ERG4P25340 473 aa2.37□□□□□ -2.03
NIP100YPL174C KTR4P38131 464 aa2.37□□□□□ -2.03
NIP100YPL174C SET5P38890 526 aaKnown RBP2.37□□□□□ -2.03
NIP100YPL174C PFD1P46988 109 aa2.37□□□□□ -2.03
NIP100YPL174C ALY2P47029 1046 aa2.37□□□□□ -2.03
NIP100YPL174C YBP2P53169 641 aa2.37□□□□□ -2.03
NIP100YPL174C DUS1P53759 423 aaKnown RBP2.37□□□□□ -2.03
NIP100YPL174C RNT1Q02555 471 aa2.37□□□□□ -2.03
NIP100YPL174C NRG1Q03125 231 aa2.37□□□□□ -2.03
NIP100YPL174C DLT1Q04216 342 aa2.37□□□□□ -2.03
NIP100YPL174C GUP2Q08929 609 aa2.37□□□□□ -2.03
NIP100YPL174C CAF20P12962 161 aaKnown RBP2.37□□□□□ -2.03
NIP100YPL174C TOP3P13099 656 aa2.37□□□□□ -2.03
NIP100YPL174C PER1P25625 357 aa2.37□□□□□ -2.03
NIP100YPL174C HIS7P33734 552 aaKnown RBP2.37□□□□□ -2.03
NIP100YPL174C DEF1P35732 738 aaKnown RBP2.37□□□□□ -2.03
NIP100YPL174C SAK1P38990 1142 aa2.37□□□□□ -2.03
NIP100YPL174C URM1P40554 99 aaPredicted RBP2.37□□□□□ -2.03
NIP100YPL174C ZDS1P50111 915 aaKnown RBP2.37□□□□□ -2.03
NIP100YPL174C TAD1P53065 400 aa2.37□□□□□ -2.03
NIP100YPL174C STI1P15705 589 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
NIP100YPL174C YFL052WP43551 465 aa2.36□□□□□ -2.03
NIP100YPL174C UBP6P43593 499 aaKnown RBP2.36□□□□□ -2.03
NIP100YPL174C SSY5P47002 699 aa2.36□□□□□ -2.03
NIP100YPL174C DAS1P47005 663 aa2.36□□□□□ -2.03
NIP100YPL174C ENV7Q12003 364 aa2.36□□□□□ -2.03
NIP100YPL174C SEC21P32074 935 aaKnown RBP2.36□□□□□ -2.03
NIP100YPL174C EMC3P36039 253 aa2.36□□□□□ -2.03
NIP100YPL174C YBR238CP38330 731 aaKnown RBP2.36□□□□□ -2.03
NIP100YPL174C DSS1P39112 969 aa2.36□□□□□ -2.03
NIP100YPL174C VHR1P40522 640 aa2.36□□□□□ -2.03
NIP100YPL174C HDA1P53973 706 aa2.36□□□□□ -2.03
NIP100YPL174C HBT1Q07653 1046 aaKnown RBP2.36□□□□□ -2.03
NIP100YPL174C YOL073CQ08232 322 aa2.36□□□□□ -2.03
NIP100YPL174C TRM11Q12463 433 aa2.36□□□□□ -2.03
NIP100YPL174C ALG7P07286 448 aa2.35□□□□□ -2.03
NIP100YPL174C RAD53P22216 821 aa2.35□□□□□ -2.03
NIP100YPL174C GSY1P23337 708 aa2.35□□□□□ -2.03
NIP100YPL174C RSP5P39940 809 aaKnown RBP2.35□□□□□ -2.03
NIP100YPL174C CTF4Q01454 927 aa2.35□□□□□ -2.03
NIP100YPL174C MET7Q08645 548 aa2.35□□□□□ -2.03
NIP100YPL174C MCH5Q08777 521 aa2.35□□□□□ -2.03
NIP100YPL174C CDC43P18898 376 aa2.35□□□□□ -2.03
NIP100YPL174C OAR1P35731 278 aa2.35□□□□□ -2.03
NIP100YPL174C CBR1P38626 284 aaKnown RBP2.35□□□□□ -2.03
NIP100YPL174C RPP1P38786 293 aa2.35□□□□□ -2.03
NIP100YPL174C RPN10P38886 268 aaKnown RBP2.35□□□□□ -2.03
NIP100YPL174C DOT6P40059 670 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 45.5 ms