RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W SDP1P40479 209 aa2.39□□□□□ -2.03
SGF11YPL047W YIL108WP40483 696 aaKnown RBP2.39□□□□□ -2.03
SGF11YPL047W GUS1P46655 708 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
SGF11YPL047W FBP1P09201 348 aa2.38□□□□□ -2.03
SGF11YPL047W CDC43P18898 376 aa2.38□□□□□ -2.03
SGF11YPL047W HCA4P20448 770 aaKnown RBP2.38□□□□□ -2.03
SGF11YPL047W AAR2P32357 355 aaPredicted RBP2.38□□□□□ -2.03
SGF11YPL047W RPD3P32561 433 aa2.38□□□□□ -2.03
SGF11YPL047W VBA5P36172 582 aa2.38□□□□□ -2.03
SGF11YPL047W TDP1P38319 544 aa2.38□□□□□ -2.03
SGF11YPL047W YBR238CP38330 731 aaKnown RBP2.38□□□□□ -2.03
SGF11YPL047W CEP3P40969 608 aa2.38□□□□□ -2.03
SGF11YPL047W YKE2P52553 114 aa2.38□□□□□ -2.03
SGF11YPL047W CWC24P53769 259 aa2.38□□□□□ -2.03
SGF11YPL047W CRR1Q05790 422 aa2.38□□□□□ -2.03
SGF11YPL047W ADY4Q05955 493 aa2.38□□□□□ -2.03
SGF11YPL047W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
SGF11YPL047W MDM10P18409 493 aa2.37□□□□□ -2.03
SGF11YPL047W NPP1P25353 742 aa2.37□□□□□ -2.03
SGF11YPL047W TYE7P33122 291 aaPredicted RBP2.37□□□□□ -2.03
SGF11YPL047W YRO2P38079 344 aa2.37□□□□□ -2.03
SGF11YPL047W RPP1P38786 293 aa2.37□□□□□ -2.03
SGF11YPL047W FKH2P41813 862 aa2.37□□□□□ -2.03
SGF11YPL047W TPO2P53283 614 aa2.37□□□□□ -2.03
SGF11YPL047W VPS16Q03308 798 aa2.37□□□□□ -2.03
SGF11YPL047W SUT2Q12286 268 aa2.37□□□□□ -2.03
SGF11YPL047W RPS9AO13516 197 aaKnown RBP2.36□□□□□ -2.03
SGF11YPL047W TUB3P09734 445 aaKnown RBP2.36□□□□□ -2.03
SGF11YPL047W CLN2P20438 545 aa2.36□□□□□ -2.03
SGF11YPL047W KIN3P22209 435 aa2.36□□□□□ -2.03
SGF11YPL047W CTF8P38877 133 aa2.36□□□□□ -2.03
SGF11YPL047W RIX1P38883 763 aaPredicted RBP2.36□□□□□ -2.03
SGF11YPL047W CCM1P48237 864 aaPredicted RBP2.36□□□□□ -2.03
SGF11YPL047W MUP1P50276 574 aa2.36□□□□□ -2.03
SGF11YPL047W YKR011CQ02209 353 aa2.36□□□□□ -2.03
SGF11YPL047W YML020WQ03722 664 aa2.36□□□□□ -2.03
SGF11YPL047W SHE9Q04172 456 aa2.36□□□□□ -2.03
SGF11YPL047W HOF1Q05080 669 aa2.36□□□□□ -2.03
SGF11YPL047W COQ11Q05892 277 aa2.36□□□□□ -2.03
SGF11YPL047W AFT2Q08957 416 aa2.36□□□□□ -2.03
SGF11YPL047W BNR1P40450 1375 aa2.36□□□□□ -2.03
SGF11YPL047W TUB1P09733 447 aaKnown RBP2.35□□□□□ -2.03
SGF11YPL047W NAP1P25293 417 aaKnown RBP2.35□□□□□ -2.03
SGF11YPL047W ILV6P25605 309 aaKnown RBP2.35□□□□□ -2.03
SGF11YPL047W PCL5P38794 229 aa2.35□□□□□ -2.03
SGF11YPL047W YHR078WP38799 552 aa2.35□□□□□ -2.03
SGF11YPL047W MAD1P40957 749 aa2.35□□□□□ -2.03
SGF11YPL047W AMA1P50082 593 aa2.35□□□□□ -2.03
SGF11YPL047W VPS73P53142 486 aaKnown RBP2.35□□□□□ -2.03
SGF11YPL047W PUS2P53167 370 aa2.35□□□□□ -2.03
SGF11YPL047W IMO32P53219 342 aa2.35□□□□□ -2.03
SGF11YPL047W PKH1Q03407 766 aa2.35□□□□□ -2.03
SGF11YPL047W YNL162W-AQ3E7A8 72 aa2.35□□□□□ -2.03
SGF11YPL047W MET6P05694 767 aaKnown RBP2.34□□□□□ -2.03
SGF11YPL047W NGG1P32494 702 aa2.34□□□□□ -2.03
SGF11YPL047W AFR1P33304 620 aa2.34□□□□□ -2.03
SGF11YPL047W MRP8P35719 219 aa2.34□□□□□ -2.03
SGF11YPL047W SIT1P39980 628 aa2.34□□□□□ -2.03
SGF11YPL047W YIL166CP40445 542 aa2.34□□□□□ -2.03
SGF11YPL047W VHR1P40522 640 aa2.34□□□□□ -2.03
SGF11YPL047W YJL163CP46996 555 aa2.34□□□□□ -2.03
SGF11YPL047W TAH11P47112 604 aa2.34□□□□□ -2.03
SGF11YPL047W RIA1P53893 1110 aa2.34□□□□□ -2.03
SGF11YPL047W PRI2P20457 528 aa2.33□□□□□ -2.04
SGF11YPL047W URA1P28272 314 aaPredicted RBP2.33□□□□□ -2.04
SGF11YPL047W SCT1P32784 759 aa2.33□□□□□ -2.04
SGF11YPL047W REC104P33323 182 aa2.33□□□□□ -2.04
SGF11YPL047W PBY1P38254 753 aa2.33□□□□□ -2.04
SGF11YPL047W CBR1P38626 284 aaKnown RBP2.33□□□□□ -2.04
SGF11YPL047W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
SGF11YPL047W MRPS35P53292 345 aa2.33□□□□□ -2.04
SGF11YPL047W HDA1P53973 706 aa2.33□□□□□ -2.04
SGF11YPL047W LCD1Q04377 747 aa2.33□□□□□ -2.04
SGF11YPL047W YAP7Q08182 245 aa2.33□□□□□ -2.04
SGF11YPL047W OPI10Q08202 246 aa2.33□□□□□ -2.04
SGF11YPL047W DMC1P25453 334 aa2.32□□□□□ -2.04
SGF11YPL047W YBR053CP38235 358 aa2.32□□□□□ -2.04
SGF11YPL047W PZF1P39933 429 aa2.32□□□□□ -2.04
SGF11YPL047W DAM1P53267 343 aa2.32□□□□□ -2.04
SGF11YPL047W SSL2Q00578 843 aa2.32□□□□□ -2.04
SGF11YPL047W ARO10Q06408 635 aa2.32□□□□□ -2.04
SGF11YPL047W NOP8Q08287 484 aaPredicted RBP2.32□□□□□ -2.04
SGF11YPL047W ICT1Q12385 394 aa2.32□□□□□ -2.04
SGF11YPL047W PRP9P19736 530 aaKnown RBP2.31□□□□□ -2.04
SGF11YPL047W PRP4P20053 465 aaKnown RBP2.31□□□□□ -2.04
SGF11YPL047W HIS7P33734 552 aaKnown RBP2.31□□□□□ -2.04
SGF11YPL047W YKL069WP36088 180 aa2.31□□□□□ -2.04
SGF11YPL047W FLO10P36170 1169 aa2.31□□□□□ -2.04
SGF11YPL047W ERT1P38140 529 aa2.31□□□□□ -2.04
SGF11YPL047W TOK1P40310 691 aa2.31□□□□□ -2.04
SGF11YPL047W IRR1P40541 1150 aa2.31□□□□□ -2.04
SGF11YPL047W YIR042CP40586 236 aa2.31□□□□□ -2.04
SGF11YPL047W HSV2P50079 448 aaPredicted RBP2.31□□□□□ -2.04
SGF11YPL047W ASI2P53895 289 aa2.31□□□□□ -2.04
SGF11YPL047W NRG1Q03125 231 aa2.31□□□□□ -2.04
SGF11YPL047W IRC13Q08630 104 aa2.31□□□□□ -2.04
SGF11YPL047W PIN2Q12057 282 aa2.31□□□□□ -2.04
SGF11YPL047W MPH2P0CD99 609 aa2.3□□□□□ -2.04
SGF11YPL047W SPO11P23179 398 aa2.3□□□□□ -2.04
SGF11YPL047W ADY2P25613 283 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms