RNA–Protein interactions for RNA: YOR339C

UBC11, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC11, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC11YOR339C VTC3Q02725 835 aa6.37□□□□□ -1.39
UBC11YOR339C COG4Q06096 861 aa6.37□□□□□ -1.39
UBC11YOR339C SPO75Q07798 868 aa6.37□□□□□ -1.39
UBC11YOR339C HFI1Q12060 488 aa6.37□□□□□ -1.39
UBC11YOR339C YDR524C-BQ3E6R4 66 aa6.37□□□□□ -1.39
UBC11YOR339C VPS13Q07878 3144 aa6.36□□□□□ -1.39
UBC11YOR339C RPS6AP0CX37 236 aaKnown RBP6.36□□□□□ -1.39
UBC11YOR339C RPS6BP0CX38 236 aaPredicted RBP6.36□□□□□ -1.39
UBC11YOR339C WHI2P12611 486 aa6.36□□□□□ -1.39
UBC11YOR339C CHS2P14180 963 aa6.36□□□□□ -1.39
UBC11YOR339C MCM2P29469 868 aa6.36□□□□□ -1.39
UBC11YOR339C SEC65P29478 273 aa6.36□□□□□ -1.39
UBC11YOR339C DPH2P32461 534 aa6.36□□□□□ -1.39
UBC11YOR339C MPE1P35728 441 aaKnown RBP6.36□□□□□ -1.39
UBC11YOR339C VID24P38263 362 aa6.36□□□□□ -1.39
UBC11YOR339C TVP23P38962 199 aa6.36□□□□□ -1.39
UBC11YOR339C ORC5P50874 479 aa6.36□□□□□ -1.39
UBC11YOR339C MNP1P53163 194 aaPredicted RBP6.36□□□□□ -1.39
UBC11YOR339C CUL3P53202 744 aa6.36□□□□□ -1.39
UBC11YOR339C UTP14Q04500 899 aaKnown RBP6.36□□□□□ -1.39
UBC11YOR339C MLH2Q07980 695 aa6.36□□□□□ -1.39
UBC11YOR339C CDC53Q12018 815 aaKnown RBP6.36□□□□□ -1.39
UBC11YOR339C FAL1Q12099 399 aaKnown RBP6.36□□□□□ -1.39
UBC11YOR339C MUD1P32605 298 aaKnown RBP6.35□□□□□ -1.39
UBC11YOR339C SAP190P36123 1033 aa6.35□□□□□ -1.39
UBC11YOR339C ALD5P40047 520 aaKnown RBP6.35□□□□□ -1.39
UBC11YOR339C YMR1P47147 688 aaKnown RBP RIP-Chip data6.35□□□□□ -1.39not detected
UBC11YOR339C SGM1P47166 707 aa6.35□□□□□ -1.39
UBC11YOR339C TIM8P57744 87 aa6.35□□□□□ -1.39
UBC11YOR339C YPL034WQ03083 165 aa6.35□□□□□ -1.39
UBC11YOR339C TRS130Q03660 1102 aa6.35□□□□□ -1.39
UBC11YOR339C GIR2Q03768 265 aaPredicted RBP6.35□□□□□ -1.39
UBC11YOR339C ECM30Q06673 1274 aa6.35□□□□□ -1.39
UBC11YOR339C RLP24Q07915 199 aaKnown RBP6.35□□□□□ -1.39
UBC11YOR339C CWC2Q12046 339 aaPredicted RBP6.35□□□□□ -1.39
UBC11YOR339C HEM1P09950 548 aaPredicted RBP6.34□□□□□ -1.39
UBC11YOR339C SSB1P11484 613 aaKnown RBP6.34□□□□□ -1.39
UBC11YOR339C SPO11P23179 398 aa6.34□□□□□ -1.39
UBC11YOR339C APL1P27351 700 aa6.34□□□□□ -1.39
UBC11YOR339C PIN4P34217 668 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
UBC11YOR339C PXL1P36166 706 aa6.34□□□□□ -1.39
UBC11YOR339C RTT107P38850 1070 aa6.34□□□□□ -1.39
UBC11YOR339C SSB2P40150 613 aaKnown RBP6.34□□□□□ -1.39
UBC11YOR339C SCD6P45978 349 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
UBC11YOR339C FYV8P46949 817 aaKnown RBP6.34□□□□□ -1.39
UBC11YOR339C STR2P47164 639 aa6.34□□□□□ -1.39
UBC11YOR339C ASN1P49089 572 aaKnown RBP6.34□□□□□ -1.39
UBC11YOR339C HSH155P49955 971 aaKnown RBP6.34□□□□□ -1.39
UBC11YOR339C HFM1P51979 1187 aa6.34□□□□□ -1.39
UBC11YOR339C VPS75P53853 264 aa6.34□□□□□ -1.39
UBC11YOR339C MUK1Q02866 612 aa6.34□□□□□ -1.39
UBC11YOR339C DON1Q05610 365 aa6.34□□□□□ -1.39
UBC11YOR339C ECM7Q06200 448 aa6.34□□□□□ -1.39
UBC11YOR339C SHS1Q07657 551 aa6.34□□□□□ -1.39
UBC11YOR339C ZPS1Q12512 249 aa6.34□□□□□ -1.39
UBC11YOR339C SWI6P09959 803 aa6.33□□□□□ -1.4
UBC11YOR339C PHO13P19881 312 aa6.33□□□□□ -1.4
UBC11YOR339C POT1P27796 417 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
UBC11YOR339C YKL023WP36103 277 aaKnown RBP6.33□□□□□ -1.4
UBC11YOR339C DRE2P36152 348 aa6.33□□□□□ -1.4
UBC11YOR339C EFM2P38347 419 aa6.33□□□□□ -1.4
UBC11YOR339C NPP2P39997 493 aa6.33□□□□□ -1.4
UBC11YOR339C SHE10P53075 577 aa6.33□□□□□ -1.4
UBC11YOR339C YNL115CP53925 644 aa6.33□□□□□ -1.4
UBC11YOR339C SLX4Q12098 748 aa6.33□□□□□ -1.4
UBC11YOR339C LDB19Q12502 818 aa6.33□□□□□ -1.4
UBC11YOR339C LAA1P39526 2014 aa6.33□□□□□ -1.4
UBC11YOR339C COX4P04037 155 aa6.32□□□□□ -1.4
UBC11YOR339C ADE4P04046 510 aaKnown RBP6.32□□□□□ -1.4
UBC11YOR339C TOM70P07213 617 aaKnown RBP6.32□□□□□ -1.4
UBC11YOR339C VMA1P17255 1071 aaKnown RBP6.32□□□□□ -1.4
UBC11YOR339C GLN3P18494 730 aa6.32□□□□□ -1.4
UBC11YOR339C ADE2P21264 571 aaKnown RBP6.32□□□□□ -1.4
UBC11YOR339C SKG6P32900 734 aaPredicted RBP6.32□□□□□ -1.4
UBC11YOR339C MRX3P38172 270 aa6.32□□□□□ -1.4
UBC11YOR339C MMS4P38257 691 aa6.32□□□□□ -1.4
UBC11YOR339C FMP30Q02883 468 aa6.32□□□□□ -1.4
UBC11YOR339C DOT1Q04089 582 aaKnown RBP6.32□□□□□ -1.4
UBC11YOR339C YLR297WQ05899 129 aa6.32□□□□□ -1.4
UBC11YOR339C YBL029C-AQ3E756 94 aa6.32□□□□□ -1.4
UBC11YOR339C UBR2Q07963 1872 aa6.32□□□□□ -1.4
UBC11YOR339C RPL4AP10664 362 aaKnown RBP6.31□□□□□ -1.4
UBC11YOR339C IME1P21190 360 aa6.31□□□□□ -1.4
UBC11YOR339C FUB1P25659 250 aa6.31□□□□□ -1.4
UBC11YOR339C PRR1P28708 518 aa6.31□□□□□ -1.4
UBC11YOR339C XRS2P33301 854 aa6.31□□□□□ -1.4
UBC11YOR339C UBX7P38349 436 aa6.31□□□□□ -1.4
UBC11YOR339C LEO1P38439 464 aa6.31□□□□□ -1.4
UBC11YOR339C STS1P38637 319 aa6.31□□□□□ -1.4
UBC11YOR339C FIR1P40020 876 aa6.31□□□□□ -1.4
UBC11YOR339C VFA1P40080 203 aa6.31□□□□□ -1.4
UBC11YOR339C FIG4P42837 879 aa6.31□□□□□ -1.4
UBC11YOR339C LAM5P43560 674 aa6.31□□□□□ -1.4
UBC11YOR339C COS5P47187 383 aa6.31□□□□□ -1.4
UBC11YOR339C GCV2P49095 1034 aa6.31□□□□□ -1.4
UBC11YOR339C RPL4BP49626 362 aaKnown RBP6.31□□□□□ -1.4
UBC11YOR339C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.31□□□□□ -1.4not detected
UBC11YOR339C TBF1Q02457 562 aa6.31□□□□□ -1.4
UBC11YOR339C UME1Q03010 460 aa6.31□□□□□ -1.4
UBC11YOR339C YLR287CQ05881 355 aa6.31□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms