RNA–Protein interactions for RNA: YOR290C

SNF2, Transcript of Catalytic subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF2, Length 5,112 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF2YOR290C CDC15P27636 974 aa4.29□□□□□ -1.72
SNF2YOR290C TCA17P32613 152 aa4.29□□□□□ -1.72
SNF2YOR290C NCL1P38205 684 aaKnown RBP4.29□□□□□ -1.72
SNF2YOR290C KAP104P38217 918 aaKnown RBP4.29□□□□□ -1.72
SNF2YOR290C RTT107P38850 1070 aa4.29□□□□□ -1.72
SNF2YOR290C BOI2P39969 1040 aa4.29□□□□□ -1.72
SNF2YOR290C YIL001WP40560 513 aa4.29□□□□□ -1.72
SNF2YOR290C YMR1P47147 688 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
SNF2YOR290C HOT1Q03213 719 aa4.29□□□□□ -1.72
SNF2YOR290C RKM2Q03942 479 aa4.29□□□□□ -1.72
SNF2YOR290C YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
SNF2YOR290C WRS1Q12109 432 aaKnown RBP4.29□□□□□ -1.72
SNF2YOR290C PDR18P53756 1333 aa4.29□□□□□ -1.72
SNF2YOR290C YMR085WP0CF18 432 aa4.28□□□□□ -1.72
SNF2YOR290C PYC1P11154 1178 aaKnown RBP4.28□□□□□ -1.72
SNF2YOR290C HNM1P19807 563 aa4.28□□□□□ -1.72
SNF2YOR290C RRP43P25359 394 aaPredicted RBP4.28□□□□□ -1.72
SNF2YOR290C ATG15P25641 520 aa4.28□□□□□ -1.72
SNF2YOR290C MSP1P28737 362 aa4.28□□□□□ -1.72
SNF2YOR290C PDB1P32473 366 aaKnown RBP4.28□□□□□ -1.72
SNF2YOR290C RSC4Q02206 625 aa4.28□□□□□ -1.72
SNF2YOR290C MFM1Q02783 413 aa4.28□□□□□ -1.72
SNF2YOR290C SOV1Q04748 898 aa4.28□□□□□ -1.72
SNF2YOR290C SPO77Q06134 477 aa4.28□□□□□ -1.72
SNF2YOR290C RRP6Q12149 733 aaKnown RBP4.28□□□□□ -1.72
SNF2YOR290C LRE1P25579 583 aaKnown RBP4.28□□□□□ -1.72
SNF2YOR290C PEP12P32854 288 aa4.28□□□□□ -1.72
SNF2YOR290C DED81P38707 554 aaKnown RBP4.28□□□□□ -1.72
SNF2YOR290C MLH1P38920 769 aa4.28□□□□□ -1.72
SNF2YOR290C SAW1P39735 261 aa4.28□□□□□ -1.72
SNF2YOR290C SCC4P40090 624 aa4.28□□□□□ -1.72
SNF2YOR290C YFL066CP43538 392 aa4.28□□□□□ -1.72
SNF2YOR290C YML6P51998 286 aa4.28□□□□□ -1.72
SNF2YOR290C CWH41P53008 833 aa4.28□□□□□ -1.72
SNF2YOR290C YGR111WP53265 400 aa4.28□□□□□ -1.72
SNF2YOR290C TIF35Q04067 274 aaKnown RBP4.28□□□□□ -1.72
SNF2YOR290C YDL144CQ07589 356 aa4.28□□□□□ -1.72
SNF2YOR290C APC5Q08683 685 aa4.28□□□□□ -1.72
SNF2YOR290C YPR204WQ08995 1032 aa4.28□□□□□ -1.72
SNF2YOR290C RMD5Q12508 421 aa4.28□□□□□ -1.72
SNF2YOR290C MSS116P15424 664 aaKnown RBP4.28□□□□□ -1.72
SNF2YOR290C PRP2P20095 876 aaPredicted RBP4.28□□□□□ -1.72
SNF2YOR290C VPH1P32563 840 aaKnown RBP4.28□□□□□ -1.72
SNF2YOR290C YBL028CP38202 106 aa4.28□□□□□ -1.72
SNF2YOR290C CEP3P40969 608 aa4.28□□□□□ -1.72
SNF2YOR290C JJJ2P46997 583 aa4.28□□□□□ -1.72
SNF2YOR290C YGR021WP53212 290 aa4.28□□□□□ -1.72
SNF2YOR290C PXL1P36166 706 aa4.28□□□□□ -1.72
SNF2YOR290C SEA4P38164 1038 aa4.28□□□□□ -1.72
SNF2YOR290C DSF2P38213 736 aa4.28□□□□□ -1.72
SNF2YOR290C APD1P38281 316 aa4.28□□□□□ -1.72
SNF2YOR290C RSC30P38781 883 aa4.28□□□□□ -1.72
SNF2YOR290C YHR122WP38829 231 aa4.28□□□□□ -1.72
SNF2YOR290C SWM2P40342 146 aa4.28□□□□□ -1.72
SNF2YOR290C YIL055CP40523 627 aaKnown RBP4.28□□□□□ -1.72
SNF2YOR290C ARC1P46672 376 aaKnown RBP4.28□□□□□ -1.72
SNF2YOR290C NUP84P52891 726 aa4.28□□□□□ -1.72
SNF2YOR290C YBP2P53169 641 aa4.28□□□□□ -1.72
SNF2YOR290C BNI5P53890 448 aaKnown RBP4.28□□□□□ -1.72
SNF2YOR290C SSH4P32343 579 aa4.27□□□□□ -1.73
SNF2YOR290C YKR075CP36155 307 aa4.27□□□□□ -1.73
SNF2YOR290C REV7P38927 245 aa4.27□□□□□ -1.73
SNF2YOR290C MDR1P53258 950 aa4.27□□□□□ -1.73
SNF2YOR290C MRS2Q01926 470 aa4.27□□□□□ -1.73
SNF2YOR290C SCS7Q03529 384 aa4.27□□□□□ -1.73
SNF2YOR290C YDR341CQ05506 607 aaKnown RBP4.27□□□□□ -1.73
SNF2YOR290C ATG38Q05789 226 aaKnown RBP4.27□□□□□ -1.73
SNF2YOR290C YDL073WQ07454 984 aa4.27□□□□□ -1.73
SNF2YOR290C FAS2P19097 1887 aaKnown RBP4.27□□□□□ -1.73
SNF2YOR290C SPS1P08458 490 aa4.27□□□□□ -1.73
SNF2YOR290C YML002WP0CF17 737 aa4.27□□□□□ -1.73
SNF2YOR290C PHO8P11491 566 aa4.27□□□□□ -1.73
SNF2YOR290C ROX1P25042 368 aa4.27□□□□□ -1.73
SNF2YOR290C SRP102P36057 244 aaPredicted RBP4.27□□□□□ -1.73
SNF2YOR290C FUI1P38196 639 aa4.27□□□□□ -1.73
SNF2YOR290C LAM1P38851 1228 aa4.27□□□□□ -1.73
SNF2YOR290C SCD6P45978 349 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73 RIP-Chip
SNF2YOR290C YJL016WP47072 561 aa4.27□□□□□ -1.73
SNF2YOR290C CSN12P47130 423 aa4.27□□□□□ -1.73
SNF2YOR290C RET3P53600 189 aa4.27□□□□□ -1.73
SNF2YOR290C ERV25P54837 211 aaKnown RBP4.27□□□□□ -1.73
SNF2YOR290C SLP1Q12232 587 aa4.27□□□□□ -1.73
SNF2YOR290C MDM20Q12387 796 aaKnown RBP4.27□□□□□ -1.73
SNF2YOR290C TY1B-AO13527 1196 aaKnown RBP4.27□□□□□ -1.73
SNF2YOR290C SUI2P20459 304 aaKnown RBP4.27□□□□□ -1.73
SNF2YOR290C GRR1P24814 1151 aa4.27□□□□□ -1.73
SNF2YOR290C SEC66P33754 206 aa4.27□□□□□ -1.73
SNF2YOR290C AXL1P40851 1208 aa4.27□□□□□ -1.73
SNF2YOR290C CDC55Q00362 526 aa4.27□□□□□ -1.73
SNF2YOR290C SEC10Q06245 871 aa4.27□□□□□ -1.73
SNF2YOR290C FRA1Q07825 749 aa4.27□□□□□ -1.73
SNF2YOR290C PSK2Q08217 1101 aa4.27□□□□□ -1.73
SNF2YOR290C NBA1Q08229 501 aaKnown RBP4.27□□□□□ -1.73
SNF2YOR290C HUA2Q12134 243 aa4.27□□□□□ -1.73
SNF2YOR290C YBR085C-AO43137 85 aa4.27□□□□□ -1.73
SNF2YOR290C YKL100CP34248 587 aa4.27□□□□□ -1.73
SNF2YOR290C TEA1P47988 759 aa4.27□□□□□ -1.73
SNF2YOR290C RPS7BP48164 190 aaKnown RBP4.27□□□□□ -1.73
SNF2YOR290C NPL3Q01560 414 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
SNF2YOR290C CDC45Q08032 650 aa4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms