RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W YKR078WP36158 585 aaKnown RBP3.75□□□□□ -1.81
PEP12YOR036W RIX1P38883 763 aaPredicted RBP3.75□□□□□ -1.81
PEP12YOR036W SNF7P39929 240 aaKnown RBP3.75□□□□□ -1.81
PEP12YOR036W SDP1P40479 209 aa3.75□□□□□ -1.81
PEP12YOR036W DAS1P47005 663 aa3.75□□□□□ -1.81
PEP12YOR036W YKE2P52553 114 aa3.75□□□□□ -1.81
PEP12YOR036W YGR053CP53234 283 aa3.75□□□□□ -1.81
PEP12YOR036W MET3P08536 511 aa3.74□□□□□ -1.81
PEP12YOR036W NPP1P25353 742 aa3.74□□□□□ -1.81
PEP12YOR036W RPD3P32561 433 aa3.74□□□□□ -1.81
PEP12YOR036W YBR238CP38330 731 aaKnown RBP3.74□□□□□ -1.81
PEP12YOR036W TAH11P47112 604 aa3.74□□□□□ -1.81
PEP12YOR036W MRPS35P53292 345 aa3.74□□□□□ -1.81
PEP12YOR036W DLT1Q04216 342 aa3.74□□□□□ -1.81
PEP12YOR036W JIP5Q06214 492 aaPredicted RBP3.74□□□□□ -1.81
PEP12YOR036W TRM11Q12463 433 aa3.74□□□□□ -1.81
PEP12YOR036W CDC48P25694 835 aaKnown RBP3.73□□□□□ -1.81
PEP12YOR036W AFR1P33304 620 aa3.73□□□□□ -1.81
PEP12YOR036W GUS1P46655 708 aaKnown RBP RIP-Chip data3.73□□□□□ -1.81not detected
PEP12YOR036W NNF1P47149 201 aa3.73□□□□□ -1.81
PEP12YOR036W FAA4P47912 694 aaKnown RBP3.73□□□□□ -1.81
PEP12YOR036W VPS73P53142 486 aaKnown RBP3.73□□□□□ -1.81
PEP12YOR036W COQ11Q05892 277 aa3.73□□□□□ -1.81
PEP12YOR036W PIN2Q12057 282 aa3.73□□□□□ -1.81
PEP12YOR036W TUB1P09733 447 aaKnown RBP3.72□□□□□ -1.81
PEP12YOR036W CAF20P12962 161 aaKnown RBP3.72□□□□□ -1.81
PEP12YOR036W GFA1P14742 717 aaKnown RBP3.72□□□□□ -1.81
PEP12YOR036W CTF8P38877 133 aa3.72□□□□□ -1.81
PEP12YOR036W VPS16Q03308 798 aa3.72□□□□□ -1.81
PEP12YOR036W HOF1Q05080 669 aa3.72□□□□□ -1.81
PEP12YOR036W PRP4P20053 465 aaKnown RBP3.71□□□□□ -1.82
PEP12YOR036W CLN2P20438 545 aa3.71□□□□□ -1.82
PEP12YOR036W YIL108WP40483 696 aaKnown RBP3.71□□□□□ -1.82
PEP12YOR036W FKH2P41813 862 aa3.71□□□□□ -1.82
PEP12YOR036W MUP1P50276 574 aa3.71□□□□□ -1.82
PEP12YOR036W YAP7Q08182 245 aa3.71□□□□□ -1.82
PEP12YOR036W ICT1Q12385 394 aa3.71□□□□□ -1.82
PEP12YOR036W YNL162W-AQ3E7A8 72 aa3.71□□□□□ -1.82
PEP12YOR036W MNR2P35724 969 aa3.7□□□□□ -1.82
PEP12YOR036W PCL5P38794 229 aa3.7□□□□□ -1.82
PEP12YOR036W ALD6P54115 500 aaKnown RBP3.7□□□□□ -1.82
PEP12YOR036W FPR4Q06205 392 aaPredicted RBP3.7□□□□□ -1.82
PEP12YOR036W SWM1Q12379 170 aa3.7□□□□□ -1.82
PEP12YOR036W MET6P05694 767 aaKnown RBP3.69□□□□□ -1.82
PEP12YOR036W SBA1P28707 216 aaKnown RBP3.69□□□□□ -1.82
PEP12YOR036W YBR053CP38235 358 aa3.69□□□□□ -1.82
PEP12YOR036W RPP1P38786 293 aa3.69□□□□□ -1.82
PEP12YOR036W MAD1P40957 749 aa3.69□□□□□ -1.82
PEP12YOR036W HCA4P20448 770 aaKnown RBP3.68□□□□□ -1.82
PEP12YOR036W AGP1P25376 633 aa3.68□□□□□ -1.82
PEP12YOR036W ERT1P38140 529 aa3.68□□□□□ -1.82
PEP12YOR036W YJL163CP46996 555 aa3.68□□□□□ -1.82
PEP12YOR036W THI7Q05998 598 aa3.68□□□□□ -1.82
PEP12YOR036W ARO10Q06408 635 aa3.68□□□□□ -1.82
PEP12YOR036W YDR306CQ06640 478 aa3.68□□□□□ -1.82
PEP12YOR036W PPH3P32345 308 aa3.67□□□□□ -1.82
PEP12YOR036W TMT1P32643 299 aa3.67□□□□□ -1.82
PEP12YOR036W VAC8P39968 578 aa3.67□□□□□ -1.82
PEP12YOR036W YJL049WP47048 450 aa3.67□□□□□ -1.82
PEP12YOR036W GDE1Q02979 1223 aa3.67□□□□□ -1.82
PEP12YOR036W SSF2Q12153 453 aaPredicted RBP3.67□□□□□ -1.82
PEP12YOR036W YOL098CQ12496 1037 aa3.67□□□□□ -1.82
PEP12YOR036W HDA1P53973 706 aa3.66□□□□□ -1.82
PEP12YOR036W YKR011CQ02209 353 aa3.66□□□□□ -1.82
PEP12YOR036W VPS30Q02948 557 aa3.66□□□□□ -1.82
PEP12YOR036W CRR1Q05790 422 aa3.66□□□□□ -1.82
PEP12YOR036W CDC43P18898 376 aa3.65□□□□□ -1.83
PEP12YOR036W KIN3P22209 435 aa3.65□□□□□ -1.83
PEP12YOR036W ADY2P25613 283 aa3.65□□□□□ -1.83
PEP12YOR036W TYE7P33122 291 aaPredicted RBP3.65□□□□□ -1.83
PEP12YOR036W VBA5P36172 582 aa3.65□□□□□ -1.83
PEP12YOR036W YHR078WP38799 552 aa3.65□□□□□ -1.83
PEP12YOR036W GGA2P38817 585 aaKnown RBP3.65□□□□□ -1.83
PEP12YOR036W DOS2P54858 310 aa3.65□□□□□ -1.83
PEP12YOR036W FAL1Q12099 399 aaKnown RBP3.65□□□□□ -1.83
PEP12YOR036W ILV6P25605 309 aaKnown RBP3.64□□□□□ -1.83
PEP12YOR036W YRO2P38079 344 aa3.64□□□□□ -1.83
PEP12YOR036W YIL166CP40445 542 aa3.64□□□□□ -1.83
PEP12YOR036W VHR1P40522 640 aa3.64□□□□□ -1.83
PEP12YOR036W CEP3P40969 608 aa3.64□□□□□ -1.83
PEP12YOR036W RIA1P53893 1110 aa3.64□□□□□ -1.83
PEP12YOR036W BUL2Q03758 920 aaKnown RBP3.64□□□□□ -1.83
PEP12YOR036W IRC13Q08630 104 aa3.64□□□□□ -1.83
PEP12YOR036W RFA1P22336 621 aaKnown RBP3.63□□□□□ -1.83
PEP12YOR036W AAR2P32357 355 aaPredicted RBP3.63□□□□□ -1.83
PEP12YOR036W NMD2P38798 1089 aaKnown RBP3.63□□□□□ -1.83
PEP12YOR036W ASI2P53895 289 aa3.63□□□□□ -1.83
PEP12YOR036W WRS1Q12109 432 aaKnown RBP3.63□□□□□ -1.83
PEP12YOR036W ADE8P04161 214 aa3.62□□□□□ -1.83
PEP12YOR036W URA1P28272 314 aaPredicted RBP3.62□□□□□ -1.83
PEP12YOR036W YKL069WP36088 180 aa3.62□□□□□ -1.83
PEP12YOR036W SIT1P39980 628 aa3.62□□□□□ -1.83
PEP12YOR036W AMA1P50082 593 aa3.62□□□□□ -1.83
PEP12YOR036W CWC24P53769 259 aa3.62□□□□□ -1.83
PEP12YOR036W RPN4Q03465 531 aa3.62□□□□□ -1.83
PEP12YOR036W SHE9Q04172 456 aa3.62□□□□□ -1.83
PEP12YOR036W NSE3Q05541 303 aa3.62□□□□□ -1.83
PEP12YOR036W STI1P15705 589 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
PEP12YOR036W KRI1P42846 591 aaKnown RBP3.61□□□□□ -1.83
PEP12YOR036W GLO1P50107 326 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 43 ms