RNA–Protein interactions for RNA: YOL142W

RRP40, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP40, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP40YOL142W SPT20P50875 604 aa6.79□□□□□ -1.32
RRP40YOL142W HUL5P53119 910 aa6.79□□□□□ -1.32
RRP40YOL142W GTF1P53260 183 aaPredicted RBP6.79□□□□□ -1.32
RRP40YOL142W PBP1P53297 722 aaKnown RBP6.79□□□□□ -1.32
RRP40YOL142W YBT1P32386 1661 aa6.79□□□□□ -1.32
RRP40YOL142W GEA2P39993 1459 aaKnown RBP6.79□□□□□ -1.32
RRP40YOL142W PDR12Q02785 1511 aa6.78□□□□□ -1.32
RRP40YOL142W ENA1P13587 1091 aa6.78□□□□□ -1.32
RRP40YOL142W HSP60P19882 572 aaKnown RBP6.78□□□□□ -1.32
RRP40YOL142W YKR078WP36158 585 aaKnown RBP6.78□□□□□ -1.32
RRP40YOL142W YHR020WP38708 688 aaKnown RBP6.78□□□□□ -1.32
RRP40YOL142W OCA5P38738 679 aa6.78□□□□□ -1.32
RRP40YOL142W MND2P40577 368 aa6.78□□□□□ -1.32
RRP40YOL142W IOC3P43596 787 aa6.78□□□□□ -1.32
RRP40YOL142W YGR125WP53273 1036 aa6.78□□□□□ -1.32
RRP40YOL142W ENA2Q01896 1091 aa6.78□□□□□ -1.32
RRP40YOL142W BDF2Q07442 638 aa6.78□□□□□ -1.32
RRP40YOL142W GPB1Q08886 897 aa6.78□□□□□ -1.32
RRP40YOL142W ENA5Q12691 1091 aa6.78□□□□□ -1.32
RRP40YOL142W CIT1P00890 479 aa6.77□□□□□ -1.33
RRP40YOL142W CDC6P09119 513 aa6.77□□□□□ -1.33
RRP40YOL142W CDC11P32458 415 aa6.77□□□□□ -1.33
RRP40YOL142W NSE3Q05541 303 aa6.77□□□□□ -1.33
RRP40YOL142W RXT3Q07458 294 aa6.77□□□□□ -1.33
RRP40YOL142W YOL098CQ12496 1037 aa6.77□□□□□ -1.33
RRP40YOL142W GDB1Q06625 1536 aa6.76□□□□□ -1.33
RRP40YOL142W SRP101P32916 621 aa6.76□□□□□ -1.33
RRP40YOL142W ERT1P38140 529 aa6.76□□□□□ -1.33
RRP40YOL142W YBR284WP38150 797 aa6.76□□□□□ -1.33
RRP40YOL142W GCV2P49095 1034 aa6.76□□□□□ -1.33
RRP40YOL142W YGR012WP53206 393 aa6.76□□□□□ -1.33
RRP40YOL142W BUL2Q03758 920 aaKnown RBP6.76□□□□□ -1.33
RRP40YOL142W CDA1Q06702 301 aa6.76□□□□□ -1.33
RRP40YOL142W TPO1Q07824 586 aa6.76□□□□□ -1.33
RRP40YOL142W FLC1Q08967 793 aa6.76□□□□□ -1.33
RRP40YOL142W CDC53Q12018 815 aaKnown RBP6.76□□□□□ -1.33
RRP40YOL142W HBN1Q96VH4 193 aa6.76□□□□□ -1.33
RRP40YOL142W STH1P32597 1359 aa6.75□□□□□ -1.33
RRP40YOL142W STI1P15705 589 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33not detected
RRP40YOL142W CDC48P25694 835 aaKnown RBP6.75□□□□□ -1.33
RRP40YOL142W RPC82P32349 654 aa6.75□□□□□ -1.33
RRP40YOL142W LCD1Q04377 747 aa6.75□□□□□ -1.33
RRP40YOL142W YPR196WQ06595 470 aa6.75□□□□□ -1.33
RRP40YOL142W ACK1Q07622 623 aaPredicted RBP6.75□□□□□ -1.33
RRP40YOL142W YPR071WQ12346 211 aa6.75□□□□□ -1.33
RRP40YOL142W HSF1P10961 833 aa6.74□□□□□ -1.33
RRP40YOL142W EMC1P25574 760 aa6.74□□□□□ -1.33
RRP40YOL142W CDC20P26309 610 aa6.74□□□□□ -1.33
RRP40YOL142W DOM34P33309 386 aa6.74□□□□□ -1.33
RRP40YOL142W POA1P38218 177 aa6.74□□□□□ -1.33
RRP40YOL142W YBR238CP38330 731 aaKnown RBP6.74□□□□□ -1.33
RRP40YOL142W YKE2P52553 114 aa6.74□□□□□ -1.33
RRP40YOL142W VPS62P53285 467 aa6.74□□□□□ -1.33
RRP40YOL142W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.74□□□□□ -1.33not detected
RRP40YOL142W ADY3Q07732 790 aa6.74□□□□□ -1.33
RRP40YOL142W HMI1Q12039 706 aa6.74□□□□□ -1.33
RRP40YOL142W TY3B-GQ99315 1547 aa6.74□□□□□ -1.33
RRP40YOL142W PRE10P21242 288 aaKnown RBP RIP-Chip data6.73□□□□□ -1.33not detected
RRP40YOL142W TOK1P40310 691 aa6.73□□□□□ -1.33
RRP40YOL142W CCM1P48237 864 aaPredicted RBP6.73□□□□□ -1.33
RRP40YOL142W TAF8Q03750 510 aa6.73□□□□□ -1.33
RRP40YOL142W NUP170P38181 1502 aa6.72□□□□□ -1.33
RRP40YOL142W DOP1Q03921 1698 aa6.72□□□□□ -1.33
RRP40YOL142W MSD1P15179 658 aaKnown RBP6.72□□□□□ -1.33
RRP40YOL142W SCT1P32784 759 aa6.72□□□□□ -1.33
RRP40YOL142W PET10P36139 283 aa6.72□□□□□ -1.33
RRP40YOL142W RSP5P39940 809 aaKnown RBP6.72□□□□□ -1.33
RRP40YOL142W HUL4P40985 892 aa6.72□□□□□ -1.33
RRP40YOL142W YAP6Q03935 383 aa6.72□□□□□ -1.33
RRP40YOL142W YLR358CO13565 187 aa6.71□□□□□ -1.34
RRP40YOL142W SPE1P08432 466 aa6.71□□□□□ -1.34
RRP40YOL142W TOP3P13099 656 aa6.71□□□□□ -1.34
RRP40YOL142W SRP40P32583 406 aaPredicted RBP6.71□□□□□ -1.34
RRP40YOL142W FLR1P38124 548 aa6.71□□□□□ -1.34
RRP40YOL142W MET12P46151 657 aa6.71□□□□□ -1.34
RRP40YOL142W YDL124WQ07551 312 aaKnown RBP6.71□□□□□ -1.34
RRP40YOL142W REC104P33323 182 aa6.7□□□□□ -1.34
RRP40YOL142W PSP2P50109 593 aaKnown RBP6.7□□□□□ -1.34
RRP40YOL142W ESC8Q08119 714 aa6.7□□□□□ -1.34
RRP40YOL142W CHC1P22137 1653 aaKnown RBP6.69□□□□□ -1.34
RRP40YOL142W CAN1P04817 590 aa6.69□□□□□ -1.34
RRP40YOL142W GGA2P38817 585 aaKnown RBP6.69□□□□□ -1.34
RRP40YOL142W NOP12Q08208 459 aaKnown RBP6.69□□□□□ -1.34
RRP40YOL142W YOR131CQ12486 218 aa6.69□□□□□ -1.34
RRP40YOL142W PDR10P51533 1564 aa6.69□□□□□ -1.34
RRP40YOL142W NOT3P06102 836 aaKnown RBP6.68□□□□□ -1.34
RRP40YOL142W HIS5P07172 385 aa6.68□□□□□ -1.34
RRP40YOL142W BET3P36149 193 aa6.68□□□□□ -1.34
RRP40YOL142W UBP6P43593 499 aaKnown RBP6.68□□□□□ -1.34
RRP40YOL142W RTA1P53047 317 aa6.68□□□□□ -1.34
RRP40YOL142W RAI1P53063 387 aaKnown RBP6.68□□□□□ -1.34
RRP40YOL142W CLU1Q03690 1277 aaKnown RBP6.68□□□□□ -1.34
RRP40YOL142W YLR224WQ05947 369 aa6.68□□□□□ -1.34
RRP40YOL142W RPP2AP05319 106 aaKnown RBP6.67□□□□□ -1.34
RRP40YOL142W GAL11P19659 1081 aa6.67□□□□□ -1.34
RRP40YOL142W YKL091CP33324 310 aaKnown RBP6.67□□□□□ -1.34
RRP40YOL142W CHA4P43634 648 aa6.67□□□□□ -1.34
RRP40YOL142W TAF1P46677 1066 aa6.67□□□□□ -1.34
RRP40YOL142W PPM2Q08282 695 aa6.67□□□□□ -1.34
RRP40YOL142W DNF2Q12675 1612 aa6.67□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms