RNA–Protein interactions for RNA: YNL216W

RAP1, Transcript of Essential DNA-binding transcription regulator that binds many loci, yeastyeast

Gene RAP1, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAP1YNL216W UTP11P34247 250 aaPredicted RBP6.65□□□□□ -1.34
RAP1YNL216W SMX2P40204 77 aaKnown RBP6.65□□□□□ -1.34
RAP1YNL216W YJR039WP47107 1121 aa6.65□□□□□ -1.34
RAP1YNL216W ECL1P48235 211 aa6.65□□□□□ -1.34
RAP1YNL216W SCY1P53009 804 aa6.65□□□□□ -1.34
RAP1YNL216W COS6P53344 381 aa6.65□□□□□ -1.34
RAP1YNL216W ADE16P54113 591 aaKnown RBP6.65□□□□□ -1.34
RAP1YNL216W ECM23Q02710 187 aa6.65□□□□□ -1.34
RAP1YNL216W YDR179W-AQ03983 463 aa6.65□□□□□ -1.34
RAP1YNL216W YIG1Q08956 461 aa6.65□□□□□ -1.34
RAP1YNL216W CWC2Q12046 339 aaPredicted RBP6.65□□□□□ -1.34
RAP1YNL216W YRF1-2P40105 1681 aa6.65□□□□□ -1.34
RAP1YNL216W SEM1O94742 89 aa6.65□□□□□ -1.35
RAP1YNL216W HIS3P06633 220 aa6.65□□□□□ -1.35
RAP1YNL216W PPR1P07272 904 aaPredicted RBP6.65□□□□□ -1.35
RAP1YNL216W SRV2P17555 526 aaKnown RBP6.65□□□□□ -1.35
RAP1YNL216W VPS1P21576 704 aaKnown RBP6.65□□□□□ -1.35
RAP1YNL216W SPS22P25380 463 aa6.65□□□□□ -1.35
RAP1YNL216W ILV6P25605 309 aaKnown RBP6.65□□□□□ -1.35
RAP1YNL216W OCT1P35999 772 aa6.65□□□□□ -1.35
RAP1YNL216W VFA1P40080 203 aa6.65□□□□□ -1.35
RAP1YNL216W IRR1P40541 1150 aa6.65□□□□□ -1.35
RAP1YNL216W YNL040WP53960 456 aaPredicted RBP6.65□□□□□ -1.35
RAP1YNL216W ZDS2P54786 942 aa6.65□□□□□ -1.35
RAP1YNL216W RPM2Q02773 1202 aa6.65□□□□□ -1.35
RAP1YNL216W YML082WQ04533 649 aaKnown RBP6.65□□□□□ -1.35
RAP1YNL216W RPN8Q08723 338 aaKnown RBP6.65□□□□□ -1.35
RAP1YNL216W NEW1Q08972 1196 aaKnown RBP6.65□□□□□ -1.35
RAP1YNL216W VIK1Q12045 647 aa6.65□□□□□ -1.35
RAP1YNL216W BRR1Q99177 341 aaPredicted RBP6.65□□□□□ -1.35
RAP1YNL216W RPL22AP05749 121 aaKnown RBP6.64□□□□□ -1.35
RAP1YNL216W RPB2P08518 1224 aaKnown RBP6.64□□□□□ -1.35
RAP1YNL216W PEP3P27801 918 aa6.64□□□□□ -1.35
RAP1YNL216W IES1P43579 692 aa6.64□□□□□ -1.35
RAP1YNL216W YGR266WP53326 701 aa6.64□□□□□ -1.35
RAP1YNL216W NAF1P53919 492 aaKnown RBP6.64□□□□□ -1.35
RAP1YNL216W LGE1Q02796 332 aaKnown RBP6.64□□□□□ -1.35
RAP1YNL216W PNP1Q05788 311 aa6.64□□□□□ -1.35
RAP1YNL216W COA4Q05809 96 aa6.64□□□□□ -1.35
RAP1YNL216W ATG17Q06410 417 aa6.64□□□□□ -1.35
RAP1YNL216W RAD59Q12223 238 aa6.64□□□□□ -1.35
RAP1YNL216W YBL113CQ7M4S9 792 aa6.64□□□□□ -1.35
RAP1YNL216W NUP133P36161 1157 aa6.64□□□□□ -1.35
RAP1YNL216W PCS60P38137 543 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
RAP1YNL216W HSM3P38348 480 aa6.64□□□□□ -1.35
RAP1YNL216W KIC1P38692 1080 aa6.64□□□□□ -1.35
RAP1YNL216W ERP5P38819 212 aa6.64□□□□□ -1.35
RAP1YNL216W CUE3P53137 624 aaKnown RBP6.64□□□□□ -1.35
RAP1YNL216W COP1P53622 1201 aaKnown RBP6.64□□□□□ -1.35
RAP1YNL216W FIN1Q03898 291 aa6.64□□□□□ -1.35
RAP1YNL216W SYF1Q04048 859 aaPredicted RBP6.64□□□□□ -1.35
RAP1YNL216W YDR306CQ06640 478 aa6.64□□□□□ -1.35
RAP1YNL216W RUP1Q12242 671 aa6.64□□□□□ -1.35
RAP1YNL216W BUD23P25627 275 aaPredicted RBP6.63□□□□□ -1.35
RAP1YNL216W SEC21P32074 935 aaKnown RBP6.63□□□□□ -1.35
RAP1YNL216W GYP6P32806 458 aa6.63□□□□□ -1.35
RAP1YNL216W UBC6P33296 250 aaPredicted RBP6.63□□□□□ -1.35
RAP1YNL216W AST1P35183 429 aa6.63□□□□□ -1.35
RAP1YNL216W RPC25P35718 212 aa6.63□□□□□ -1.35
RAP1YNL216W TGL4P36165 910 aa6.63□□□□□ -1.35
RAP1YNL216W GGA2P38817 585 aaKnown RBP6.63□□□□□ -1.35
RAP1YNL216W STN1P38960 494 aa6.63□□□□□ -1.35
RAP1YNL216W JJJ2P46997 583 aa6.63□□□□□ -1.35
RAP1YNL216W RFX1P48743 811 aa6.63□□□□□ -1.35
RAP1YNL216W TEC1P18412 486 aa6.62□□□□□ -1.35
RAP1YNL216W MSB1P21339 1137 aaKnown RBP6.62□□□□□ -1.35
RAP1YNL216W VMA4P22203 233 aaKnown RBP6.62□□□□□ -1.35
RAP1YNL216W CNA1P23287 553 aa6.62□□□□□ -1.35
RAP1YNL216W ITR2P30606 609 aa6.62□□□□□ -1.35
RAP1YNL216W MCD4P36051 919 aa6.62□□□□□ -1.35
RAP1YNL216W JNM1P36224 373 aa6.62□□□□□ -1.35
RAP1YNL216W SPC72P39723 622 aa6.62□□□□□ -1.35
RAP1YNL216W HOP2P53187 214 aa6.62□□□□□ -1.35
RAP1YNL216W PTA1Q01329 785 aaPredicted RBP6.62□□□□□ -1.35
RAP1YNL216W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.62□□□□□ -1.35not detected
RAP1YNL216W SHE9Q04172 456 aa6.62□□□□□ -1.35
RAP1YNL216W ERB1Q04660 807 aaKnown RBP6.62□□□□□ -1.35
RAP1YNL216W DON1Q05610 365 aa6.62□□□□□ -1.35
RAP1YNL216W BBP1Q12365 385 aa6.62□□□□□ -1.35
RAP1YNL216W ZRT2Q12436 422 aa6.62□□□□□ -1.35
RAP1YNL216W NUP120P35729 1037 aa6.62□□□□□ -1.35
RAP1YNL216W PCF11P39081 626 aaPredicted RBP6.62□□□□□ -1.35
RAP1YNL216W ALG5P40350 334 aa6.62□□□□□ -1.35
RAP1YNL216W YGL176CP46945 554 aa6.62□□□□□ -1.35
RAP1YNL216W NOP9P47077 666 aaKnown RBP6.62□□□□□ -1.35
RAP1YNL216W SGM1P47166 707 aa6.62□□□□□ -1.35
RAP1YNL216W HEH2Q03281 663 aa6.62□□□□□ -1.35
RAP1YNL216W TFB4Q12004 338 aa6.62□□□□□ -1.35
RAP1YNL216W DBP10Q12389 995 aaKnown RBP6.62□□□□□ -1.35
RAP1YNL216W POM152P39685 1337 aa6.62□□□□□ -1.35
RAP1YNL216W PRP9P19736 530 aaKnown RBP6.61□□□□□ -1.35
RAP1YNL216W EFT1P32324 842 aaKnown RBP6.61□□□□□ -1.35
RAP1YNL216W NPT1P39683 429 aaKnown RBP6.61□□□□□ -1.35
RAP1YNL216W MON1P53129 644 aa6.61□□□□□ -1.35
RAP1YNL216W NOP15P53927 220 aaPredicted RBP6.61□□□□□ -1.35
RAP1YNL216W MMT1Q03218 510 aa6.61□□□□□ -1.35
RAP1YNL216W APC2Q12440 853 aa6.61□□□□□ -1.35
RAP1YNL216W CDC6P09119 513 aa6.61□□□□□ -1.35
RAP1YNL216W CLN3P13365 580 aa6.61□□□□□ -1.35
RAP1YNL216W YAK1P14680 807 aa6.61□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms