RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W PSK2Q08217 1101 aa8.05□□□□□ -1.12
HDA1YNL021W NEM1P38757 446 aa8.04□□□□□ -1.12
HDA1YNL021W MEP3P53390 489 aa8.04□□□□□ -1.12
HDA1YNL021W VPS30Q02948 557 aa8.04□□□□□ -1.12
HDA1YNL021W UTP5Q04177 643 aaKnown RBP8.04□□□□□ -1.12
HDA1YNL021W SDH5Q08230 162 aa8.04□□□□□ -1.12
HDA1YNL021W NEW1Q08972 1196 aaKnown RBP8.04□□□□□ -1.12
HDA1YNL021W MCM7P38132 845 aa8.03□□□□□ -1.12
HDA1YNL021W BIT2P38346 545 aa8.03□□□□□ -1.12
HDA1YNL021W AIM14P53109 570 aa8.03□□□□□ -1.12
HDA1YNL021W NBA1Q08229 501 aaKnown RBP8.03□□□□□ -1.12
HDA1YNL021W YER152CP10356 443 aa8.03□□□□□ -1.12
HDA1YNL021W HOM3P10869 527 aa8.03□□□□□ -1.12
HDA1YNL021W SIS1P25294 352 aaKnown RBP8.03□□□□□ -1.12
HDA1YNL021W BEM3P32873 1128 aa8.03□□□□□ -1.12
HDA1YNL021W MNN11P46985 422 aaKnown RBP8.03□□□□□ -1.12
HDA1YNL021W ECM9Q02202 377 aa8.03□□□□□ -1.12
HDA1YNL021W ATG33Q06485 197 aa8.03□□□□□ -1.12
HDA1YNL021W SWI3P32591 825 aa8.02□□□□□ -1.13
HDA1YNL021W MCD4P36051 919 aa8.02□□□□□ -1.13
HDA1YNL021W YTA6P40328 754 aa8.02□□□□□ -1.13
HDA1YNL021W GUD1Q07729 489 aa8.02□□□□□ -1.13
HDA1YNL021W CHS3P29465 1165 aa8.02□□□□□ -1.13
HDA1YNL021W SER1P33330 395 aaKnown RBP8.02□□□□□ -1.13
HDA1YNL021W TFA2P36145 328 aa8.02□□□□□ -1.13
HDA1YNL021W JNM1P36224 373 aa8.02□□□□□ -1.13
HDA1YNL021W PAP2P53632 584 aaKnown RBP8.02□□□□□ -1.13
HDA1YNL021W RIA1P53893 1110 aa8.02□□□□□ -1.13
HDA1YNL021W KRE5P22023 1365 aa8.01□□□□□ -1.13
HDA1YNL021W SCP160P06105 1222 aaKnown RBP RIP-Chip data8.01□□□□□ -1.13 RIP-Chip
HDA1YNL021W FUS1P11710 512 aa8.01□□□□□ -1.13
HDA1YNL021W HMG1P12683 1054 aa8.01□□□□□ -1.13
HDA1YNL021W MIH1P23748 554 aa8.01□□□□□ -1.13
HDA1YNL021W CCT5P40413 562 aaKnown RBP8.01□□□□□ -1.13
HDA1YNL021W RSC1P53236 928 aa8.01□□□□□ -1.13
HDA1YNL021W CEG1Q01159 459 aaPredicted RBP8.01□□□□□ -1.13
HDA1YNL021W SAS4Q04003 481 aa8.01□□□□□ -1.13
HDA1YNL021W RSC3Q06639 885 aa8.01□□□□□ -1.13
HDA1YNL021W GRC3Q07845 632 aa8.01□□□□□ -1.13
HDA1YNL021W CFT1Q06632 1357 aaKnown RBP8.01□□□□□ -1.13
HDA1YNL021W TRK1P12685 1235 aa8□□□□□ -1.13
HDA1YNL021W ADD66P36040 267 aa8□□□□□ -1.13
HDA1YNL021W SLS1P42900 643 aa8□□□□□ -1.13
HDA1YNL021W YGR283CP53336 341 aaPredicted RBP8□□□□□ -1.13
HDA1YNL021W MOT3P54785 490 aaKnown RBP8□□□□□ -1.13
HDA1YNL021W ECM38Q05902 660 aaPredicted RBP8□□□□□ -1.13
HDA1YNL021W CLF1Q12309 687 aaPredicted RBP8□□□□□ -1.13
HDA1YNL021W RMP1Q12530 201 aa8□□□□□ -1.13
HDA1YNL021W MLP1Q02455 1875 aaKnown RBP8□□□□□ -1.13
HDA1YNL021W TY4B-PA0A0B7P3V8 1104 aa8□□□□□ -1.13
HDA1YNL021W HTS1P07263 546 aaKnown RBP8□□□□□ -1.13
HDA1YNL021W MLS1P30952 554 aa8□□□□□ -1.13
HDA1YNL021W AAR2P32357 355 aaPredicted RBP8□□□□□ -1.13
HDA1YNL021W RGA1P39083 1007 aa8□□□□□ -1.13
HDA1YNL021W PPT1P53043 513 aa8□□□□□ -1.13
HDA1YNL021W GTR1Q00582 310 aa8□□□□□ -1.13
HDA1YNL021W TY4A-HQ6Q5P6 413 aa8□□□□□ -1.13
HDA1YNL021W RPS21AP0C0V8 87 aaKnown RBP7.99□□□□□ -1.13
HDA1YNL021W DBP2P24783 546 aaKnown RBP7.99□□□□□ -1.13
HDA1YNL021W RRN3P36070 627 aa7.99□□□□□ -1.13
HDA1YNL021W SHU2P38957 223 aa7.99□□□□□ -1.13
HDA1YNL021W VPS8P39702 1274 aa7.99□□□□□ -1.13
HDA1YNL021W RLP24Q07915 199 aaKnown RBP7.99□□□□□ -1.13
HDA1YNL021W NPP1P25353 742 aa7.99□□□□□ -1.13
HDA1YNL021W HXT6P39003 570 aaKnown RBP7.99□□□□□ -1.13
HDA1YNL021W HXT7P39004 570 aa7.99□□□□□ -1.13
HDA1YNL021W YER156CP40093 338 aaKnown RBP7.99□□□□□ -1.13
HDA1YNL021W TOK1P40310 691 aa7.99□□□□□ -1.13
HDA1YNL021W TSR2Q06672 205 aaKnown RBP7.99□□□□□ -1.13
HDA1YNL021W TY1B-NL2Q99337 1749 aaKnown RBP7.98□□□□□ -1.13
HDA1YNL021W RGP1P16664 663 aa7.98□□□□□ -1.13
HDA1YNL021W CAF120P53836 1060 aa7.98□□□□□ -1.13
HDA1YNL021W COX11P19516 300 aaKnown RBP7.97□□□□□ -1.13
HDA1YNL021W TFC3P34111 1160 aa7.97□□□□□ -1.13
HDA1YNL021W FKH1P40466 484 aa7.97□□□□□ -1.13
HDA1YNL021W YJR124CP47159 448 aa7.97□□□□□ -1.13
HDA1YNL021W YNR065CP53751 1116 aa7.97□□□□□ -1.13
HDA1YNL021W IMH1Q06704 911 aaKnown RBP7.97□□□□□ -1.13
HDA1YNL021W IDI1P15496 288 aa7.97□□□□□ -1.13
HDA1YNL021W PFK1P16861 987 aaKnown RBP7.97□□□□□ -1.13
HDA1YNL021W RET1P22276 1149 aaKnown RBP7.97□□□□□ -1.13
HDA1YNL021W URA1P28272 314 aaPredicted RBP7.97□□□□□ -1.13
HDA1YNL021W HOG1P32485 435 aa7.97□□□□□ -1.13
HDA1YNL021W ECM32P32644 1121 aaKnown RBP7.97□□□□□ -1.13
HDA1YNL021W TAD1P53065 400 aa7.97□□□□□ -1.13
HDA1YNL021W ATP25Q03153 612 aa7.97□□□□□ -1.13
HDA1YNL021W LCD1Q04377 747 aa7.97□□□□□ -1.13
HDA1YNL021W DUS3Q06053 668 aaKnown RBP7.97□□□□□ -1.13
HDA1YNL021W YOL114CQ12322 202 aa7.97□□□□□ -1.13
HDA1YNL021W ALG3P38179 458 aa7.96□□□□□ -1.13
HDA1YNL021W YBR238CP38330 731 aaKnown RBP7.96□□□□□ -1.13
HDA1YNL021W PNT1P38969 423 aa7.96□□□□□ -1.13
HDA1YNL021W TMA108P40462 946 aa7.96□□□□□ -1.13
HDA1YNL021W UPF3P48412 387 aaKnown RBP7.96□□□□□ -1.13
HDA1YNL021W HNT2P49775 206 aa7.96□□□□□ -1.13
HDA1YNL021W EIS1Q05050 843 aaKnown RBP7.96□□□□□ -1.13
HDA1YNL021W GNT1Q12096 491 aa7.96□□□□□ -1.13
HDA1YNL021W GFA1P14742 717 aaKnown RBP7.96□□□□□ -1.14
HDA1YNL021W MSM1P22438 575 aa7.96□□□□□ -1.14
HDA1YNL021W STO1P34160 861 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 115.5 ms