RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C PBP1P53297 722 aaKnown RBP4.33□□□□□ -1.72
VPS33YLR396C RSC3Q06639 885 aa4.33□□□□□ -1.72
VPS33YLR396C CDA2Q06703 312 aa4.33□□□□□ -1.72
VPS33YLR396C TPO1Q07824 586 aa4.33□□□□□ -1.72
VPS33YLR396C YOR352WQ08816 343 aa4.33□□□□□ -1.72
VPS33YLR396C INO80P53115 1489 aa4.33□□□□□ -1.72
VPS33YLR396C CDC9P04819 755 aa4.33□□□□□ -1.72
VPS33YLR396C GSY1P23337 708 aa4.33□□□□□ -1.72
VPS33YLR396C DSS1P39112 969 aa4.33□□□□□ -1.72
VPS33YLR396C CEP3P40969 608 aa4.33□□□□□ -1.72
VPS33YLR396C YJR142WP47173 342 aa4.33□□□□□ -1.72
VPS33YLR396C PSP2P50109 593 aaKnown RBP4.33□□□□□ -1.72
VPS33YLR396C TAD1P53065 400 aa4.33□□□□□ -1.72
VPS33YLR396C GTF1P53260 183 aaPredicted RBP4.33□□□□□ -1.72
VPS33YLR396C NOG2P53742 486 aaKnown RBP4.33□□□□□ -1.72
VPS33YLR396C GCN5Q03330 439 aa4.33□□□□□ -1.72
VPS33YLR396C YDR514CQ04408 483 aa4.33□□□□□ -1.72
VPS33YLR396C REH1Q06709 432 aa4.33□□□□□ -1.72
VPS33YLR396C FBP1P09201 348 aa4.32□□□□□ -1.72
VPS33YLR396C RPL8AP17076 256 aaKnown RBP4.32□□□□□ -1.72
VPS33YLR396C DAL7P21826 554 aa4.32□□□□□ -1.72
VPS33YLR396C GAS1P22146 559 aaKnown RBP4.32□□□□□ -1.72
VPS33YLR396C RPD3P32561 433 aa4.32□□□□□ -1.72
VPS33YLR396C TYE7P33122 291 aaPredicted RBP4.32□□□□□ -1.72
VPS33YLR396C POA1P38218 177 aa4.32□□□□□ -1.72
VPS33YLR396C MET12P46151 657 aa4.32□□□□□ -1.72
VPS33YLR396C JSN1P47135 1091 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
VPS33YLR396C GCV2P49095 1034 aa4.32□□□□□ -1.72
VPS33YLR396C YKR011CQ02209 353 aa4.32□□□□□ -1.72
VPS33YLR396C TFB2Q02939 513 aa4.32□□□□□ -1.72
VPS33YLR396C SSL1Q04673 461 aaPredicted RBP4.32□□□□□ -1.72
VPS33YLR396C HMI1Q12039 706 aa4.32□□□□□ -1.72
VPS33YLR396C ATG19P35193 415 aa4.31□□□□□ -1.72
VPS33YLR396C HXT16P47185 567 aa4.31□□□□□ -1.72
VPS33YLR396C VPS62P53285 467 aa4.31□□□□□ -1.72
VPS33YLR396C DNM1P54861 757 aa4.31□□□□□ -1.72
VPS33YLR396C VPS30Q02948 557 aa4.31□□□□□ -1.72
VPS33YLR396C LRS4Q04087 347 aaKnown RBP4.31□□□□□ -1.72
VPS33YLR396C GPB1Q08886 897 aa4.31□□□□□ -1.72
VPS33YLR396C RPS13P05756 151 aaKnown RBP4.31□□□□□ -1.72
VPS33YLR396C SRD1P09007 221 aa4.31□□□□□ -1.72
VPS33YLR396C YCL002CP25565 263 aa4.31□□□□□ -1.72
VPS33YLR396C MCD4P36051 919 aa4.31□□□□□ -1.72
VPS33YLR396C URM1P40554 99 aaPredicted RBP4.31□□□□□ -1.72
VPS33YLR396C SOD2P00447 233 aa4.3□□□□□ -1.72
VPS33YLR396C PER1P25625 357 aa4.3□□□□□ -1.72
VPS33YLR396C CYS3P31373 394 aaKnown RBP4.3□□□□□ -1.72
VPS33YLR396C AIM3P38266 947 aaKnown RBP4.3□□□□□ -1.72
VPS33YLR396C CAF16P43569 289 aa4.3□□□□□ -1.72
VPS33YLR396C WHI4Q07655 649 aaKnown RBP4.3□□□□□ -1.72
VPS33YLR396C YLR001CQ07895 862 aa4.3□□□□□ -1.72
VPS33YLR396C YPL277CQ08989 487 aa4.3□□□□□ -1.72
VPS33YLR396C YGR161W-CQ3E744 92 aa4.3□□□□□ -1.72
VPS33YLR396C RPS9AO13516 197 aaKnown RBP4.3□□□□□ -1.72
VPS33YLR396C HIS5P07172 385 aa4.3□□□□□ -1.72
VPS33YLR396C EMC1P25574 760 aa4.3□□□□□ -1.72
VPS33YLR396C STO1P34160 861 aaKnown RBP4.3□□□□□ -1.72
VPS33YLR396C EBP2P36049 427 aaKnown RBP4.3□□□□□ -1.72
VPS33YLR396C NIT1P40447 199 aa4.3□□□□□ -1.72
VPS33YLR396C YIL108WP40483 696 aaKnown RBP4.3□□□□□ -1.72
VPS33YLR396C CHA4P43634 648 aa4.3□□□□□ -1.72
VPS33YLR396C PRP43P53131 767 aaKnown RBP4.3□□□□□ -1.72
VPS33YLR396C RXT3Q07458 294 aa4.3□□□□□ -1.72
VPS33YLR396C YBR182C-AQ8TGU6 64 aa4.3□□□□□ -1.72
VPS33YLR396C RPP2AP05319 106 aaKnown RBP4.29□□□□□ -1.72
VPS33YLR396C ELM1P32801 640 aa4.29□□□□□ -1.72
VPS33YLR396C YNL193WP53870 558 aa4.29□□□□□ -1.72
VPS33YLR396C ACK1Q07622 623 aaPredicted RBP4.29□□□□□ -1.72
VPS33YLR396C NOP12Q08208 459 aaKnown RBP4.29□□□□□ -1.72
VPS33YLR396C HAL9Q12180 1030 aa4.29□□□□□ -1.72
VPS33YLR396C PRP6P19735 899 aaPredicted RBP4.28□□□□□ -1.72
VPS33YLR396C PCL2P25693 308 aa4.28□□□□□ -1.72
VPS33YLR396C CDC20P26309 610 aa4.28□□□□□ -1.72
VPS33YLR396C SFP1P32432 683 aa4.28□□□□□ -1.72
VPS33YLR396C CAB3P36076 571 aa4.28□□□□□ -1.72
VPS33YLR396C RLP7P40693 322 aaKnown RBP4.28□□□□□ -1.72
VPS33YLR396C AVT1P47082 602 aa4.28□□□□□ -1.72
VPS33YLR396C RIM8P53179 542 aa4.28□□□□□ -1.72
VPS33YLR396C YAP6Q03935 383 aa4.28□□□□□ -1.72
VPS33YLR396C UPC2Q12151 913 aa4.28□□□□□ -1.72
VPS33YLR396C ADR1P07248 1323 aa4.28□□□□□ -1.72
VPS33YLR396C RNQ1P25367 405 aa4.28□□□□□ -1.72
VPS33YLR396C YEL1P34225 687 aa4.28□□□□□ -1.72
VPS33YLR396C SPT20P50875 604 aa4.28□□□□□ -1.72
VPS33YLR396C SNP1Q00916 300 aaPredicted RBP4.28□□□□□ -1.72
VPS33YLR396C THI21Q08975 551 aa4.28□□□□□ -1.72
VPS33YLR396C YOR022CQ12204 715 aa4.28□□□□□ -1.72
VPS33YLR396C MMS22Q06164 1454 aa4.28□□□□□ -1.72
VPS33YLR396C STE14P32584 239 aa4.27□□□□□ -1.73
VPS33YLR396C CTF8P38877 133 aa4.27□□□□□ -1.73
VPS33YLR396C SET5P38890 526 aaKnown RBP4.27□□□□□ -1.73
VPS33YLR396C ZDS1P50111 915 aaKnown RBP4.27□□□□□ -1.73
VPS33YLR396C NCS6P53088 359 aa4.27□□□□□ -1.73
VPS33YLR396C PUS2P53167 370 aa4.27□□□□□ -1.73
VPS33YLR396C NRD1P53617 575 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
VPS33YLR396C RAD18P10862 487 aa4.26□□□□□ -1.73
VPS33YLR396C THI80P35202 319 aa4.26□□□□□ -1.73
VPS33YLR396C SDP1P40479 209 aa4.26□□□□□ -1.73
VPS33YLR396C ALY2P47029 1046 aa4.26□□□□□ -1.73
VPS33YLR396C DUS1P53759 423 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms