RNA–Protein interactions for RNA: YLR103C

CDC45, Transcript of DNA replication initiation factor, yeast

Gene CDC45, Length 1,953 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC45	YLR103C	PGA2	P53903	129 aa		4.05	□□□□□ -1.76
CDC45	YLR103C	ORC4	P54791	529 aa		4.05	□□□□□ -1.76
CDC45	YLR103C	EBS1	Q03466	884 aa	Known RBP	4.05	□□□□□ -1.76
CDC45	YLR103C	TMA64	Q04600	565 aa	Known RBP	4.05	□□□□□ -1.76
CDC45	YLR103C	ESC2	Q06340	456 aa		4.05	□□□□□ -1.76
CDC45	YLR103C	UBX5	Q06682	500 aa		4.05	□□□□□ -1.76
CDC45	YLR103C	YOL075C	Q08234	1294 aa		4.05	□□□□□ -1.76
CDC45	YLR103C	WTM2	Q12206	467 aa		4.05	□□□□□ -1.76
CDC45	YLR103C	OM45	P16547	393 aa		4.04	□□□□□ -1.76
CDC45	YLR103C	PER1	P25625	357 aa		4.04	□□□□□ -1.76
CDC45	YLR103C	SEC65	P29478	273 aa		4.04	□□□□□ -1.76
CDC45	YLR103C	TGL1	P34163	548 aa		4.04	□□□□□ -1.76
CDC45	YLR103C	MCD4	P36051	919 aa		4.04	□□□□□ -1.76
CDC45	YLR103C	PPS1	P38148	807 aa		4.04	□□□□□ -1.76
CDC45	YLR103C	SIP3	P38717	1229 aa		4.04	□□□□□ -1.76
CDC45	YLR103C	PIH1	P38768	344 aa		4.04	□□□□□ -1.76
CDC45	YLR103C	ACO2	P39533	789 aa		4.04	□□□□□ -1.76
CDC45	YLR103C	ROG3	P43602	733 aa		4.04	□□□□□ -1.76
CDC45	YLR103C	AIP1	P46680	615 aa	Known RBP	4.04	□□□□□ -1.76
CDC45	YLR103C	RRT6	P53117	311 aa	Predicted RBP	4.04	□□□□□ -1.76
CDC45	YLR103C	GUP1	P53154	560 aa		4.04	□□□□□ -1.76
CDC45	YLR103C	ALD6	P54115	500 aa	Known RBP	4.04	□□□□□ -1.76
CDC45	YLR103C	BDS1	Q08347	646 aa		4.04	□□□□□ -1.76
CDC45	YLR103C	RPS6A	P0CX37	236 aa	Known RBP	4.03	□□□□□ -1.76
CDC45	YLR103C	RPS6B	P0CX38	236 aa	Predicted RBP	4.03	□□□□□ -1.76
CDC45	YLR103C	PFK1	P16861	987 aa	Known RBP	4.03	□□□□□ -1.76
CDC45	YLR103C	SUV3	P32580	737 aa		4.03	□□□□□ -1.76
CDC45	YLR103C	PGM1	P33401	570 aa	Known RBP	4.03	□□□□□ -1.76
CDC45	YLR103C	SHP1	P34223	423 aa		4.03	□□□□□ -1.76
CDC45	YLR103C	UBX7	P38349	436 aa		4.03	□□□□□ -1.76
CDC45	YLR103C	CTM1	P38818	585 aa		4.03	□□□□□ -1.76
CDC45	YLR103C	RTT107	P38850	1070 aa		4.03	□□□□□ -1.76
CDC45	YLR103C	YIL089W	P40500	205 aa		4.03	□□□□□ -1.76
CDC45	YLR103C	ULP2	P40537	1034 aa	Predicted RBP	4.03	□□□□□ -1.76
CDC45	YLR103C	OSW7	P43611	510 aa		4.03	□□□□□ -1.76
CDC45	YLR103C	FYV8	P46949	817 aa	Known RBP	4.03	□□□□□ -1.76
CDC45	YLR103C	DIP5	P53388	608 aa		4.03	□□□□□ -1.76
CDC45	YLR103C	DUS3	Q06053	668 aa	Known RBP	4.03	□□□□□ -1.76
CDC45	YLR103C	SPH1	Q06160	661 aa		4.03	□□□□□ -1.76
CDC45	YLR103C	WHI4	Q07655	649 aa	Known RBP	4.03	□□□□□ -1.76
CDC45	YLR103C	SRF1	Q12516	437 aa		4.03	□□□□□ -1.76
CDC45	YLR103C	CLN3	P13365	580 aa		4.03	□□□□□ -1.76
CDC45	YLR103C	VMA2	P16140	517 aa	Known RBP	4.03	□□□□□ -1.76
CDC45	YLR103C	PHO13	P19881	312 aa		4.03	□□□□□ -1.76
CDC45	YLR103C	UTR4	P32626	227 aa		4.03	□□□□□ -1.76
CDC45	YLR103C	RPC25	P35718	212 aa		4.03	□□□□□ -1.76
CDC45	YLR103C	YKR018C	P36114	725 aa		4.03	□□□□□ -1.76
CDC45	YLR103C	SHM1	P37292	490 aa	Predicted RBP	4.03	□□□□□ -1.76
CDC45	YLR103C	NUP82	P40368	713 aa		4.03	□□□□□ -1.76
CDC45	YLR103C	YFL034W	P43564	1073 aa		4.03	□□□□□ -1.76
CDC45	YLR103C	CTR1	P49573	406 aa		4.03	□□□□□ -1.76
CDC45	YLR103C	CNM67	P53865	581 aa	Known RBP	4.03	□□□□□ -1.76
CDC45	YLR103C	FUS2	Q05670	677 aa		4.03	□□□□□ -1.76
CDC45	YLR103C	YAP7	Q08182	245 aa		4.03	□□□□□ -1.76
CDC45	YLR103C	PGK1	P00560	416 aa	Known RBP	4.02	□□□□□ -1.77
CDC45	YLR103C	SRD1	P09007	221 aa		4.02	□□□□□ -1.77
CDC45	YLR103C	RRP43	P25359	394 aa	Predicted RBP	4.02	□□□□□ -1.77
CDC45	YLR103C	SPC110	P32380	944 aa		4.02	□□□□□ -1.77
CDC45	YLR103C	UBP11	P36026	717 aa		4.02	□□□□□ -1.77
CDC45	YLR103C	MCR1	P36060	302 aa	Known RBP	4.02	□□□□□ -1.77
CDC45	YLR103C	GLY1	P37303	387 aa	Known RBP	4.02	□□□□□ -1.77
CDC45	YLR103C	MIP6	P38760	659 aa	Known RBP	4.02	□□□□□ -1.77
CDC45	YLR103C	GPD2	P41911	440 aa	Known RBP	4.02	□□□□□ -1.77
CDC45	YLR103C	TOS3	P43637	560 aa		4.02	□□□□□ -1.77
CDC45	YLR103C	STU2	P46675	888 aa		4.02	□□□□□ -1.77
CDC45	YLR103C	NET1	P47035	1189 aa		4.02	□□□□□ -1.77
CDC45	YLR103C	HUL5	P53119	910 aa		4.02	□□□□□ -1.77
CDC45	YLR103C	YGL039W	P53183	348 aa	Known RBP	4.02	□□□□□ -1.77
CDC45	YLR103C	SEC5	P89102	971 aa		4.02	□□□□□ -1.77
CDC45	YLR103C	PTA1	Q01329	785 aa	Predicted RBP	4.02	□□□□□ -1.77
CDC45	YLR103C	SVF1	Q05515	481 aa		4.02	□□□□□ -1.77
CDC45	YLR103C	PHM6	Q05637	104 aa		4.02	□□□□□ -1.77
CDC45	YLR103C	YCG1	Q06680	1035 aa		4.02	□□□□□ -1.77
CDC45	YLR103C	YDL057W	Q07379	328 aa		4.02	□□□□□ -1.77
CDC45	YLR103C	GUD1	Q07729	489 aa		4.02	□□□□□ -1.77
CDC45	YLR103C	SPO75	Q07798	868 aa		4.02	□□□□□ -1.77
CDC45	YLR103C	APL4	Q12028	832 aa		4.02	□□□□□ -1.77
CDC45	YLR103C	CFT2	Q12102	859 aa	Predicted RBP	4.02	□□□□□ -1.77
CDC45	YLR103C	TY1B-A	O13527	1196 aa	Known RBP	4.02	□□□□□ -1.77
CDC45	YLR103C	PCH2	P38126	564 aa		4.02	□□□□□ -1.77
CDC45	YLR103C	SSN3	P39073	555 aa		4.02	□□□□□ -1.77
CDC45	YLR103C	GPB2	P39717	880 aa		4.02	□□□□□ -1.77
CDC45	YLR103C	RPN3	P40016	523 aa	Known RBP	4.02	□□□□□ -1.77
CDC45	YLR103C	SUM1	P46676	1062 aa		4.02	□□□□□ -1.77
CDC45	YLR103C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
CDC45	YLR103C	CAF120	P53836	1060 aa		4.02	□□□□□ -1.77
CDC45	YLR103C	YLR287C	Q05881	355 aa		4.02	□□□□□ -1.77
CDC45	YLR103C	CRD1	Q07560	283 aa		4.02	□□□□□ -1.77
CDC45	YLR103C	ATG9	Q12142	997 aa		4.02	□□□□□ -1.77
CDC45	YLR103C	RRP6	Q12149	733 aa	Known RBP	4.02	□□□□□ -1.77
CDC45	YLR103C	TY1A-BL	Q12266	440 aa		4.02	□□□□□ -1.77
CDC45	YLR103C	CDC19	P00549	500 aa	Known RBP	4.01	□□□□□ -1.77
CDC45	YLR103C	DAL7	P21826	554 aa		4.01	□□□□□ -1.77
CDC45	YLR103C	SPO11	P23179	398 aa		4.01	□□□□□ -1.77
CDC45	YLR103C	PRP22	P24384	1145 aa	Known RBP	4.01	□□□□□ -1.77
CDC45	YLR103C	RPC53	P25441	422 aa		4.01	□□□□□ -1.77
CDC45	YLR103C	CDC48	P25694	835 aa	Known RBP	4.01	□□□□□ -1.77
CDC45	YLR103C	TRK2	P28584	889 aa		4.01	□□□□□ -1.77
CDC45	YLR103C	HUL4	P40985	892 aa		4.01	□□□□□ -1.77
CDC45	YLR103C	YJR098C	P47139	656 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms